Syngnathus scovelli (Gulf pipefish): 125978599
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Entry
125978599 CDS
T08785
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125978599 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978599 (gbf1)
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125978599 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
125978599
NCBI-ProteinID:
XP_049592033
LinkDB
All DBs
Position
12:complement(322424..349747)
Genome browser
AA seq
1880 aa
AA seq
DB search
MVDKRIYIVQGEITAVAGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILSHMKDLSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEGVAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKTYAGASMKKAYNILWKNKRVQLKMRTGGMSESSKWK
KQKRSPKATRHIVPSASEATESTNLGNSNLSGAVVSMEPRCSLPASESAGSSISSPTATD
SGLDSCSKTTSREDLSDLDQCSLFAATPGNANPLLETDPGSAKAQSDDGATQSASVESIP
EVLEEKDSVAEQPASSTSVHDMDYVNPRGVRFTQSTQRDGASLIPYGLPCLRELFRFLIS
LTNPHDRHNTDAMMHMGLQLLNVALESAHFVNYQSLLGLIKDELCRHLFQLLSMDRMNLY
ALSLRVCFLLFESMRVHLKFQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLWRIPS
FVTELYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQ
AKVPDNTARSEKVPAEGESFMKNGMDATADPIQEASTNGFPLVDGGPGGPVTSGNLMAEK
MNLCRQEQRGSDADDKKIFQKPQRFTSNLPDSQELLEIRTKKKLLITGTEQFNLKPKKGI
QFLQEKGLLNQPMDNNQVAQWLRENPRLDKKMIGEFVSDRNNMELLDSFVNTFAFQGLRI
DEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFLTNDAGFALAYAVIMLNTDQH
NHNVRKQNIPMTVEQFKKNLKGVNGNTDFNQDMLEDIYNAIKNDEIVMPDEQMGLVKENY
VWSVLLHRGATPEGIFLHLPPASYDHDLFTMTWGPTIAALSYVFDKSLDDNIIQKAITGF
RKCAKIAAHYGFNNVFDNLIISLCKFTTLSSESVENLPTVFGSNPKAQTAAKTVFELAHQ
HGNILREGWKNIMDSVLQLFRAELLPKAMVEVEDFLEPNGTISLQREETPSIRGESAVLS
FVNWLTLSGAEQSGLRGPSMENQEAKQAAILCIKQCDPEKMITESKFLQLESLQELMKAL
ISVTPDEETYDEEDAAFCLEMLLRIVMENRDRVSCVWQTVREHLCHLCVHANESCFLVER
AVVGLLRLAIRLLRREDISSQVLLSLRLLLMMKAHVLSRVSREVAYGLHELLKTNAANIH
STEHWYTLFSLLECIGAGVKPPASFQFTTSASTDIETGAQSDSELPSPHPSEVTLDRGYT
SDSEVYTEHSKARIPRSATDVDVASSGWLVVGKEDLESNKSPAVGSKAQLNHPLVNQYSL
TLGQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDK
KKSHRYDSAKSRLRKKAGGAKEKESGNGTRRGASRASGHRPARCHSDDEEDEGVPAGYHT
LSLQVSRDLLDLMHTLHTRAASIYSSWAEEQCNLEAAGKKIEADSQTLWTSCWCPLLQGI
AWLCCDARRQVRMQALNYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLNNISPADV
GGMEETRMRACTILSKVFLQHLLPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPE
SLKNMLLVMDTAEIFHSPDSKTRYSDLWEITWERIDCFLPHLREELFKQTVLPGPSEAPS
EVQPPSSSCRPPSPQGSGVPALQQPPSPVLVPAESPTPSRPASPQESQVANSNGAERSSS
PTLPSTPVAAAQPPHGQVCAALKQQSPLIIQPLASPLQVGVPPMSLPIILNPALIEATSP
VPLLPAGPRPAAGSTSHEVQ
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaaagaatctacatcgtccagggtgaaattactgctgttgccggggctatc
aagaggaactccagatggaacacccacactcccttggatgaagaacaggatccattgttg
aacagctttggccacctgaaggaaatactcagccacatgaaagacctgtccgacgttgaa
cccaacgtattcctacgaccgttcctggaggtggtccgctctgaagataccacgggacca
atcacaggcctcgcccttacatctgtcaataagttcttatcatacggcttaatagatgcc
aaccacgaaggtgtagccgaggccatcgagaatatggccgatgcggtaacgcacgccaga
tttgtcggaacggaccctgccagtgacgaggtggtccttatgaaaattctacaggtctta
aggaccctgttgctgacaccagttggagctcacctgaccaatgaatccgtttgtgagatc
atgcagtcctgcttccgaatctgctttgagatgcgcttgagcgagctcctgagaaaatca
gccgaacacacccttgtggatatggtgcagctactgtttagcagacttccccaatttaag
gaggaggccaaaacctacgccggtgccagcatgaagaaggcttacaatatcttatggaaa
aacaaacgagtacagttgaagatgcgtacaggtgggatgagtgagtcgtccaaatggaaa
aagcagaaacgttcaccaaaggcgactcgccacatagtgccgagcgcttccgaagccacg
gagtctaccaacctcggtaatagcaacttgtctggcgcagtcgtctcgatggagccgagg
tgttcgctgcccgcctcagagagtgccggctcatccatctctagtcccaccgccacagac
agcggcttggactcgtgttccaaaaccacttctcgggaagacctctctgacctggatcag
tgtagcttgtttgcagctacacctggcaacgctaacccgcttttggagacagatcctggc
tctgccaaggcgcagtcggacgacggagcgactcaatcggcatcggtagagtccatcccc
gaagttctggaggaaaaagactcggttgctgaacagccagcaagtagcacctctgtccac
gacatggactacgtcaatcctcgaggtgtccggttcacgcagtccacgcaaagagatggc
gcatccctcatcccctatggtctgccatgtctaagggagctcttccgctttctaatctcc
ttgaccaaccctcacgaccgccacaacactgacgccatgatgcacatgggcctgcagctg
ctgaatgtagccctggagtcggcgcactttgttaactaccagtctttgcttggactcatc
aaagatgagctttgtaggcatcttttccagctgctgagcatggaccgtatgaacctctat
gctttgtcgttacgagtgtgcttcttgctatttgaaagcatgagagtgcatcttaaattt
caactggagatgtatcttaagaaactgatggacatcatcacgtcagagaatatgaagatg
ccgtatgagatgaaggaaatggctttggaggcattggtccagctgtggaggatccccagc
tttgttactgagctctacatcaactatgactgcgacttctactgctctaatctgtttgaa
gacctgaccaagctgttgtcaaagaatgcattccctgtatcagggcagctctacaccact
caccttctgtcactcgaagctctactcactgtgattgacagcaccgaggcccactgccaa
gccaaagtgcccgacaacacggctcggtccgaaaaagtgccagcggagggagaaagtttc
atgaaaaatggaatggatgctacagctgatcctattcaagaggccagtaccaatggtttt
ccacttgtggatggtggtccaggaggcccagtgaccagtggaaatctgatggcagaaaag
atgaacctgtgtagacaggagcaaagagggagtgacgcggatgacaagaaaatctttcaa
aaacctcagcgtttcacttccaatttacccgactcccaagagttgctggaaatcagaaca
aagaaaaagcttctgataaccgggacggaacaatttaatctgaaacccaagaagggaatt
cagttccttcaggagaaaggccttctcaatcagccaatggataacaaccaagtggcccag
tggcttcgagaaaatcctagattggacaaaaagatgatcggggaatttgtcagcgatcgc
aataatatggagctcctcgacagctttgtcaacacgttcgccttccaagggcttcgtatc
gatgaggccttgcggctttacctggaggctttcaggttacccggcgaggctcctgtcatc
caaagacttctggaaacatttacagacaactggcataaagtaaacggctctcccttcctg
accaacgatgcaggattcgccttggcctacgccgtgatcatgttgaacactgaccagcat
aatcacaatgtccgaaaacagaatatccccatgactgtcgagcaattcaagaagaatctg
aagggagttaatgggaacacagattttaatcaggacatgctcgaggatatctacaatgcc
attaagaatgacgagattgtgatgccagatgagcagatgggtttagtgaaggagaactac
gtgtggagtgtgctgcttcaccgcggcgccacaccagaggggatttttcttcacctgccg
cccgccagctacgaccacgacttgttcaccatgacctggggccctactatcgcagcgctc
tcctacgtctttgacaagagtctggatgacaacatcatccaaaaggccattaccggcttt
aggaaatgtgccaagattgctgctcactatggattcaacaacgtttttgacaatttgatc
atctcgctgtgcaagtttacgactctgagcagtgagtcagtggaaaatctcccgactgta
tttgggagcaacccgaaggcgcaaacagccgccaagacagtgtttgagctggcccatcag
catggcaacatcttgagagagggttggaagaacatcatggactccgtgctgcagctgttc
agggccgagctcctccccaaagccatggttgaggtggaggattttctcgaaccaaacgga
acgatttctcttcaacgagaggaaactccttctattcgtggggagtcagcagtgctgagt
tttgtcaactggctgacactgagcggtgctgagcagtctggacttcgaggaccatcgatg
gaaaatcaagaagccaaacaggccgctatcctttgcatcaagcaatgtgaccccgagaaa
atgatcacagagagcaagtttctccagctggagtctttacaggaattaatgaaggcgtta
atatcggtcacccccgatgaagagacctacgatgaagaggacgccgccttctgcttagag
atgttactgcgtattgtcatggaaaatcgagaccgtgtgtcgtgcgtgtggcagaccgtg
cgcgagcacctgtgtcacctgtgcgtccacgctaacgagagctgcttcttggtagagagg
gctgtcgtgggcctgcttcgactcgccatccgcctgctacgacgtgaagatattagctct
caggtgctgctttccctgcgtcttctgcttatgatgaaagcgcacgttttgtcccgggta
agccgagaggtggcttacggccttcacgagctgctcaagacgaacgcggccaacatccac
agtaccgagcattggtacacgctcttctcgttgctggaatgcatcggtgctggagtcaaa
cctccggcctcctttcagtttactacctctgccagcacggacattgaaacaggtgctcag
tcagatagcgagttgccgtcccctcatccgagcgaagtgactttagatcgtggctacaca
tctgactcggaggtctacacggaacacagcaaggcccgaatccctcgctcggcaacagac
gtggacgtcgcgagcagtggatggctggtggtgggaaaggaggatttggaaagcaataag
agcccggcagtcggctccaaagcgcaactcaatcaccccttggtgaaccagtacagtctg
acgctgggtcaggacctcggccagcatgacaccaagtctctcatcaagtgtgtggaaacg
ctgtccttcattgtccgcgacgccgcccacgtcacaccggacaactttgagctgtgtgtt
cgagccatccgggtcttcgtggaggcgagtctcaatggaggttaccgcaaccacgacaag
aagaagagtcataggtatgattcggccaagtctcgtttgaggaagaaggccggcggcgca
aaggagaaagagagcggcaacggcacaagacgaggcgcaagccgggcttccggccatcgt
ccggcgcgttgccatagcgatgatgaggaggacgagggtgtcccggcaggttaccatacg
ctgtcattacaggttagtcgggatcttttagatttaatgcacacgttgcacacccgggct
gccagcatctacagctcttgggcagaagaacagtgcaatctggaggccgctggtaaaaag
attgaagctgactcccagacactgtggaccagctgctggtgcccactgctgcaaggcatt
gcttggctgtgctgcgatgccagacgtcaagtgcgcatgcaggccctcaactacctccag
agggctttgctggtacacgatctgcagacgctcgatgccacggagtgggagtcctgcttc
aataaggtgctatttccattactaaccaagctgcttaacaacatcagcccggccgatgtc
ggtggaatggaggagaccaggatgagagcctgcactatcctatcaaaggtttttctgcag
cacctcctcccgttgttgtccctgccgacctttgctgccctgtggcttaccattctggat
ttcatggacaagtacatgcatgcaggatccagtgacttattgttggaggctatccccgaa
tctctgaagaacatgctgttggtgatggacacggcggaaatcttccacagcccagattcc
aagacaagatattcggatttgtgggaaataacgtgggaacgaatcgactgtttcctccct
cacctgagagaggagctctttaaacagactgttttaccaggtccttcagaagctccgtct
gaagtgcagccaccgtcctcatcctgccggcctccctcaccgcagggctctggggtccct
gcgctccaacaaccgccctcccctgtccttgtgcctgcagaatccccaactcccagccgg
ccagcatcgccccaagagagccaagtggccaattccaacggagcagagcgctcatcttcc
ccaacgttgccctcgacgccggtggcagcggcgcaaccccctcatggtcaggtgtgcgca
gccttgaagcagcagtccccactcatcatccaaccgctggcttccccgctgcaagtggga
gtcccgcccatgtcgctaccaatcatcctcaaccccgccctcattgaggccacgtccccg
gtgccgctgcttcccgctggccccaggccggcggcgggaagcacatctcacgaggttcag
tag
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