Syngnathus scovelli (Gulf pipefish): 125978616
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Entry
125978616 CDS
T08785
Name
(RefSeq) ras-related protein ORAB-1
KO
K07874
Ras-related protein Rab-1A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125978616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978616
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125978616
04031 GTP-binding proteins [BR:
sscv04031
]
125978616
Membrane trafficking [BR:
sscv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
125978616
Autophagy
Other autophagy associated proteins
125978616
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125978616
Exosomal proteins of other body fluids (saliva and urine)
125978616
Exosomal proteins of colorectal cancer cells
125978616
GTP-binding proteins [BR:
sscv04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
125978616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
AAA
AAA_7
ABC_tran
PduV-EutP
AAA_16
LANC_like
AAA_29
Septin
AAA_22
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
125978616
NCBI-ProteinID:
XP_049592084
LinkDB
All DBs
Position
12:complement(216823..220893)
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAAAG
GGEKPSMKLTPGTTVKPSSGGCC
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaatatgactatttattcaaactgctcctgattggtgactctggtgttgga
aaatcttgtctcctgctccgatttgccgacgatacatacacagaaagctacattagcaca
attggtgtggacttcaaaatacggaccatagaactcgatggaaagaccattaaacttcag
atttgggatacagcaggccaagaaaggtttcgtacgatcacgtccagttactatcgaggc
gctcacggtatcattgtagtgtatgatgtcacagatcaagaatccttcaataatgttaaa
caatggctacaggagattgaccgctatgccagtgaaaatgtcaacaagttgttggtaggc
aacaagtgtgacctgacgacaaagaaggtggtggattacacaacagccaaggagtttgca
gactctttgggcatccccttcttggaaaccagtgccaagaacgccaccaatgtggagcag
gccttcatgaccatggctgcagagattaaaaaaagaatgggccctggcgccgcggccggc
ggtggcgagaagcccagcatgaagctgacgcccggaaccaccgtcaagccttcatcgggc
ggctgctgttga
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integrated database retrieval system
