Syngnathus scovelli (Gulf pipefish): 125978621
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Entry
125978621 CDS
T08785
Symbol
bod1l1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125978621 (bod1l1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125978621 (bod1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
125978621
NCBI-ProteinID:
XP_049592089
LinkDB
All DBs
Position
1:8843544..8854789
Genome browser
AA seq
1749 aa
AA seq
DB search
MAGLPPGDPQLVSMIVNHLKTQGLFDQFRRDCLADVDTKPAYLNLKQRVDNFVSNHLSNH
TWSPQLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKVNHIFRPQVEKVVDQFVSPG
TSSEEPPTSSTETQVDAVIPQQASTSVPTSTAATDAMSILDAITSLNQEANIRSTEKGRK
ALDEPIEDGEQDMSLDEEEDRKTEEEEADQANLGEELRELEVTTVDAPDQMDIGKEISTD
EIKMEEEEPRAEDQAEEKLKVGVKTSGKPSEEKQDEENYQAKQKAKERIKEEYSLDDSDL
DGLSDITVSSVHTSDLSSFEGESEDEEPLSDSSEEGERAPDGENLDKREAGEEMGEEGKE
SKPRRKAYVHKPFLYSRYYSDSDDEVTVEERRRSAAKDKEERLLKRQQNRERMEEKRKMK
AAQSEEQDQKKQKSSMSTGLKTPRAKEARKERKVLEKKVALSRMRKLDSRKEDEVTSKKK
GEAGETSKKPEVKSTPLRSLHQKLVRNQSESSVPDERHRITSGSGGISEDLGDAKKFPDK
SRTHAFILDLELGSQEALRQRSVGKFDRPPRKDRKEKERSMSEELPKLKLKQDKKSELQV
NESQQKESMTARTSSDERSEKKPKVKNEKKMTSTKELKTSASEADEASAKRMRALSVDKD
KSREKDKMKEKEKIKGVKITKSESKQALYHDSSGSSEDRPEVAQGVDSGKKKEKHGKDIL
KRSKSHSEDKPKLKTENKEKTKAEQPNKSLADSDKSPKRVKQAEKGKPMEKSKPREELKS
HTASKMDKKTHSLDIRGASGAGKPEKEKKKEGPVKEQRRSSEEPVVKSAKKKADKKEKKE
ENHEGKKAPTEDKVDKSDMSVSTEAEETPMQATLSESAIVSSDGACEPFSDIAPEVETPV
QEMPVVPPEADALLTLMDVCTSAMDARLHVAVGGEHGQLQATLQDADMKMKEAALTLLSM
DPDSALSSAFMTHGLKEETEEPMPEENKQNPQEEASDFAYQTVKSEGDKLNLEEKSVDVF
LLKEKSEMDAASDKPPLLPALQEKDSKPQDLSLNEKTQTGEKAADSALAENEAAPSDEHD
APVADNGTGNVEGNVAVHPCEAATLEHVDSPQVQTASDVDTLTRANADEILVMGQMDVGN
AAVSSSGKLDLQKQDEEERGAQTVELCFPTGVVTEPNSGTEVAKQESESSGILEPEKNSE
VSKKQERGRGRPKRKLSNQNVAAVNECVGSDQDAKEPSSEETEQPKFVEVKTPRRGRSSK
ATEEVEEEPLKQLEKKEQTPGRRGRRPAAKGNAADRIEMKASLSDEPAAKKKRSAKNGEP
QVGDEMIKNTSEEATAETSWADTKNTNEARTGISVETISEETLKSTGEETLEKTMDEAGK
GTSEEAMQVADEQDSNGKSEEATTNTSVETIKDTSKETVEDSHEKATKNSNEEATTNVSE
ERTKDTNEEASKDTSEEASKHTSEEASKDTSGEAYKDTSEEASKDTSEEASKDRSEEASK
DRSEEASKDTSEEASKDTSEKASKDTSEEASKDTSEEASKDTSEMATMETNEDAIMDAID
EYTSEEGIKDTHKETMKDTISTPKNEEPKEESSSEQKPNVVRGQVDEQQGSTPKKPARRG
RPPKAAMALNDSDKKEKTAGEKEAEQNDEDEIGGVKDHDGKEKKGRATTRLASRLEAERN
KPSKPSTRASRLSGKDETAAAARGTRSPGNAAKGARKLEASPAAVRTRGGQKPEEPPAKR
GKRCSHVHN
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttaccaccgggtgatccgcagctagtgtcaatgatcgtcaatcacttaaaa
actcaaggactcttcgaccagttcaggagagactgcctcgcagatgtagacactaagcca
gcatatctgaacctgaaacaacgagtggacaactttgtctccaatcacctctccaaccat
acatggagcccccagttgaacaaaaaccagttgcgtaacaacatcaggcagctggtgttg
caatccggcatgctggagcagggtgtggacagaatcgtggcccaggtggtggatcccaag
gtcaaccacatcttcaggccgcaagtagagaaagtggtcgaccaatttgtgtcacctggc
actagcagcgaggagccgccgacgtcctcgacagagacccaagtggacgctgtcattcct
cagcaggcctcaacatccgtcccaacatccactgctgccacagatgccatgtccatcttg
gacgccattacctcgcttaaccaggaggccaacatcaggtccaccgagaagggacgcaaa
gcccttgacgagcccattgaggatggcgagcaggacatgagtctggatgaggaagaagac
aggaagacggaggaggaagaggcagaccaagcaaatctgggggaggagctccgggaatta
gaggtaacgacagtcgacgctccggaccagatggacattgggaaggaaatctccacggac
gaaataaagatggaggaggaagagccacgagcggaagaccaggctgaggagaaactgaaa
gtgggtgttaaaacaagtgggaaaccttcagaggagaaacaggacgaagaaaactaccag
gccaagcagaaagccaaagagaggataaaagaagagtattctttggatgactctgatttg
gatggcctgagtgacatcacggtgagttccgtgcacaccagcgacctgtcatcatttgaa
ggggagagcgaagacgaggagccgttgtctgattcttctgaggagggcgagcgtgcacca
gatggtgaaaatttagacaagagagaagcaggtgaggagatgggagaagaaggcaaagag
agtaagcctcgccgcaaggcctacgtccacaagccctttctgtactcccgttactatagc
gactctgatgatgaggtcactgtcgaggaaaggcggagatctgcggccaaggacaaagaa
gaacgtctgctcaaaaggcagcaaaatcgagagcgaatggaagagaaacgcaagatgaaa
gcagcacagtctgaagaacaagatcagaaaaaacagaagagcagcatgtcaactgggctc
aaaacaccccgagccaaagaagcccgtaaagagcgtaaagttctggagaaaaaagtggct
ctcagcagaatgaggaagctcgactcaaggaaagaagatgaggtgaccagcaagaaaaaa
ggagaagcaggagaaacatcaaagaaaccagaagtaaaatcaacaccattgcgcagccta
catcagaagctggtgagaaatcagtccgagtcttcggtgcctgacgagaggcaccgaatt
acaagcgggagcggcggcatctctgaagatttgggtgacgccaagaagttccctgacaaa
agtcgcacgcacgccttcatcttggacttggagctgggctcacaggaggctctcaggcag
cgatccgtcgggaagtttgaccgcccgccccgcaaggaccgcaaggagaaggaacgctct
atgtctgaggagctccccaagctcaaactgaagcaggacaagaaatccgaactccaggtc
aacgaatctcagcaaaaggagagcatgactgccaggacgtcctctgatgagagaagtgag
aaaaagcctaaagtgaaaaatgagaagaaaatgaccagtacaaaggaactgaagacttct
gcttccgaggctgacgaggcttcagccaagaggatgcgggccctgtctgttgacaaagac
aagagtcgtgagaaagacaagatgaaagagaaagaaaagatcaaaggggttaaaataaca
aaaagtgagtcaaagcaagcactctatcacgattcttctggctcctctgaggatcggcct
gaggtggcacaaggagtggacagcggtaagaagaaggagaaacacggcaaagacatcctg
aaaaggtccaagagccacagtgaggacaaacccaaactaaaaacggaaaacaaagaaaag
acaaaagcagagcaacccaacaagtctcttgccgacagcgacaaatccccaaagagagtc
aaacaagcagagaaaggaaaacccatggaaaaatccaaacccagagaggaactcaagtcc
cacacggcatccaagatggacaaaaaaactcacagtttggacattcgtggggcctcaggt
gccggcaaacctgaaaaggaaaagaagaaggagggccctgtgaaggagcagaggagaagc
tctgaagagcctgttgtcaagagcgcaaagaaaaaagcggacaagaaagagaagaaagag
gagaaccacgaggggaagaaagcacccacagaagacaaggttgacaagtcagacatgtct
gtttccacggaggccgaggagacgccaatgcaagcgacactctccgaatcggccatcgtc
tcctctgacggcgcttgcgaacctttcagcgacatcgcccctgaagtggagacgccagtg
caggaaatgcccgtcgtgccaccggaggctgacgctctgctgacgctgatggacgtgtgc
acctcggccatggatgccaggctgcacgtggcggtcggcggagagcacggccaactccag
gcgaccctgcaggacgccgacatgaagatgaaagaggcggccctcacgcttctctccatg
gaccccgacagcgctttgtcctccgccttcatgactcacggactaaaagaggaaacagag
gagccgatgcccgaggagaacaagcagaacccacaagaagaggcttctgactttgcatac
cagactgtgaagagtgagggtgacaaattgaatcttgaagaaaaatctgttgatgttttc
ctcttaaaagaaaaatctgaaatggatgcagcaagtgacaaaccccccttgctgcctgct
ctccaggagaaagactccaagccacaagacctttctttgaatgaaaagactcaaactgga
gagaaagctgccgactcagcgctagctgaaaatgaggcagcaccttctgatgaacatgac
gctccagttgctgataacggcacaggaaacgtggaggggaatgttgctgtgcatccttgt
gaggcagctactctagagcatgttgacagtccacaagtgcaaaccgcgtcagatgtcgac
acgctgacacgggccaatgcagatgagatattagtcatggggcagatggacgtcggtaac
gctgccgtctcatcatcgggcaaactggatctgcaaaaacaggacgaggaggagcgtggt
gcacaaactgtggaactctgctttccaactggagtggtcacagaacccaatagtggaaca
gaagtggccaaacaagaaagtgagagctcgggcatccttgagccggagaagaactctgag
gtgtccaagaagcaggaaagaggacgaggcagacctaaacgaaagctgtcaaatcagaat
gttgcagcagtgaatgaatgcgtaggtagtgatcaggatgcaaaagaaccgtcatctgag
gaaactgaacagccgaagtttgtggaggtgaaaacgccgcgcaggggacgatcgtcaaaa
gccacggaagaagtggaggaggagccgctgaagcaattggagaaaaaggagcagacgcca
ggtcgcagagggagacgtccagcagccaagggtaacgctgctgatcgtattgaaatgaag
gcctcattatcagatgaacccgcagcaaagaagaagagatcagcgaagaatggagaacct
caagtgggagatgaaatgatcaagaacaccagtgaggaggccactgctgaaacaagttgg
gcggacacaaagaacactaatgaggctcggaccggcataagtgtggagaccataagtgaa
gaaaccctaaagagcacaggtgaagagactcttgagaagacaatggatgaggctggaaag
ggcacaagtgaggaagccatgcaagtagcagatgagcaggattcaaatggtaaaagtgag
gaagcgactacaaatacgagcgtggagaccatcaaagacacaagtaaggaaacagtagag
gactcacatgagaaggcgaccaagaactcaaatgaagaagccacaaccaatgttagtgaa
gagagaacaaaggacacaaatgaggaggcatctaaggacacaagtgaggaggcatctaag
cacacaagtgaagaggcatctaaggatacaagtggggaggcttataaggatacaagtgag
gaggcatctaaggatacaagtgaggaggcatctaaggacagaagtgaggaggcatctaag
gacagaagtgaggaggcatctaaggacacaagtgaggaggcatctaaggacacaagtgag
aaggcatctaaggacacaagtgaggaggcatctaaggacacaagtgaggaggcatctaag
gacacaagtgagatggctactatggaaacaaatgaggacgccataatggatgctattgat
gagtacacaagtgaagagggcatcaaggacacacacaaggagacaatgaaggacacaatt
tctacccccaaaaatgaggagccaaaggaggagagcagcagtgagcagaaacccaacgtt
gtacgtgggcaggttgacgagcagcaagggtccactcccaagaagccggctcggagggga
agaccgcccaaggccgccatggccttaaatgactcagataaaaaagagaagactgcaggt
gaaaaggaggcggagcagaatgacgaggacgagattggtggagtgaaagaccacgacggc
aaagaaaagaaaggccgagctacaacgcgcttggcatctcgtctggaagctgaaagaaat
aagcccagcaaaccttccacgagggctagtcgactgagcggcaaagacgagaccgcagct
gctgcgcgtggaaccaggagcccgggaaacgccgccaagggggcccgcaaactggaggcc
agccctgctgctgtgcgaacgcgaggagggcagaagccagaggagcccccggccaaacga
ggaaaacgctgctctcacgtacacaattaa
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integrated database retrieval system
