Syngnathus scovelli (Gulf pipefish): 125978642
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Entry
125978642 CDS
T08785
Symbol
lmbrd1
Name
(RefSeq) lysosomal cobalamin transport escort protein LMBD1
KO
K14617
LMBR1 domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04977
Vitamin digestion and absorption
sscv04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125978642 (lmbrd1)
04980 Cobalamin transport and metabolism
125978642 (lmbrd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978642 (lmbrd1)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125978642 (lmbrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
TgpA_N
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
125978642
NCBI-ProteinID:
XP_049592151
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Position
12:6846863..6872537
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AA seq
537 aa
AA seq
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MAAESFLSESALGWSIFTFTLLVILAFCWVYIRKFQSRQESEVVSTITAICALAIALITS
ALLPVDIFLVSFMKYPNGTYKEWAINNETRAQIEDTVLYGYYALYSIILFCVFLWIPFVY
FYYEERDDDNVNRCSQIKNALKYTIGFVLVCVVLLLIGAFVPLEAPPQQNATQWEKVQYL
FEELGSGHGLHALAFSISTLTLIGMLAVITYTAYGMSVLPLNLIKGTRSVAYERLENTED
IDDVEHQIEKLKSKCRDGRPLSSRDRNHLQELEEKLQVLQRRGRHLEIAERNCCNKIGSA
LRPFKIILGIFFILVALLFSVALFISNLDKALHSAGISSGFIIFGTNLTNPLNELLLALQ
PVFPLDYILITVITVYFVLTSMAGIRNMGIWFFWIRLYKIRPKRTRPQALLFLCMILLLI
VLHTSYMIYSLAPQYVMYGSQKYLIESPSGLTLGNTSFSTTRVCDANAPEDQCIVTRSYL
FLHKFWFFSTIYYFGNWAFIGAFLIGLVVSCCRGKKSVIEGEVEADDSDVSDDEYVH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagtcgtttctctccgagtcggctcttggttggtctattttcacctttaca
ctattggtcatccttgctttctgttgggtctacatccgcaaatttcaaagtcgccaggag
agtgaagttgtttcaaccattacggcaatatgtgcactggctatagcgctaataacatct
gcacttcttcccgtggatatcttcctcgtctccttcatgaagtacccaaatggcacctac
aaggaatgggctataaacaatgagacaagagcccaaattgaagatactgttctgtatgga
tattacgcactttactccatcatcctcttctgtgtgtttctatggatcccttttgtttat
ttctactatgaagaaagagacgatgacaatgtcaacagatgctcgcaaatcaaaaacgct
ctgaagtacacgattggatttgtacttgtctgcgtggtgttgctattaattggagcattt
gtgcccctggaggctccaccacaacagaatgccacacagtgggagaaagttcaatacctt
tttgaggaacttggcagcggccatggcctacatgctcttgctttctccatcagcactctg
actctgatcgggatgctggcagtgatcacttacacagcatacggtatgtctgtgttgcct
ttgaatctgataaaaggcacacggagtgtggcatatgaacgcctggagaacacagaggac
attgatgatgtcgagcatcagatcgagaagctgaaatccaagtgtcgagatggacgccct
ttgtcatcacgggacagaaaccatctgcaggaactcgaagaaaagttgcaggttctacag
cggagagggagacacctggaaattgctgagaggaactgctgcaacaaaataggtagtgct
ctcagaccttttaagattatactgggcattttctttatcctggttgctctgctgttttct
gttgcgctgttcatttcaaatctggataaagctcttcactctgctggtatcagctctgga
tttataatctttggcaccaatctaaccaatcctttgaatgaacttctattagctttgcag
cctgtgtttccattggattatatcctgattacagtcatcacagtgtattttgtactcaca
tccatggcgggtattcgcaacatgggcatctggttcttttggataaggctgtacaaaatc
cgaccaaaaagaacacgtccccaggctcttctcttcctctgtatgattttgcttttgatt
gttctccataccagctacatgatctacagtctcgcacctcagtacgtgatgtacggcagc
cagaaatatctcatagagagtccatcgggccttactttggggaacacttcattcagcact
accagggtctgtgatgccaatgcgcctgaggaccaatgcattgtaaccaggtcatatctt
ttcctccacaagttctggttcttcagtaccatctactactttgggaactgggcctttatt
ggggctttcctcatcggcctggtggtgtcatgctgccgggggaagaagtctgtgattgaa
ggcgaggtggaggccgatgactcagacgtcagcgatgatgaatatgtgcactga
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