Syngnathus scovelli (Gulf pipefish): 125978652
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Entry
125978652 CDS
T08785
Symbol
nkx2.3
Name
(RefSeq) homeobox protein Nkx-2.3
KO
K09343
homeobox protein Nkx-2.3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125978652 (nkx2.3)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125978652 (nkx2.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
PRIMA1
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
125978652
NCBI-ProteinID:
XP_049592165
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Position
12:complement(6479931..6482487)
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AA seq
341 aa
AA seq
DB search
MLPSPVITSSSTPFSVKDILKLELQQQSQEFQFISCFSGLSGALPVQTGAFRAHSPPSCM
LARRDSPSPISSESDERMSYLGALAGADRLHAESGLPVEMFSNPAQIHPVELELENEQEE
DRDAKVGCPSRCEEAEKPPGKQQRTRRKPRVLFSQTQVFELERRFKRQRYLSAPEREHLA
GSLKLTPTQVKIWFQNRRYKCKRQRQDKTLEMAGHHHHHHHHHPPGPPPPPPPPRRVAVP
VLVRDGRPCLTGSPTYNTSYSAVGAPSAYGYNGYPAYSYNNSVYTNTYSCTSLPALPPSN
SAANAFMNMNLGPLGAQTQSQSAQGAVVPPCQGTLQGIRAW
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctccccagtcctgttataacatcctccagcacgcctttttctgtcaaggacatcttg
aagttggagctgcaacagcaatcgcaagaattccagttcatctcgtgcttctcgggtcta
tctggcgcgctcccggtgcagaccggtgctttccgagcgcactcgccgccctcctgcatg
ctggctcgcagggatagcccgagtccaatcagctcggagagcgacgagaggatgtcgtac
ctcggcgcgcttgcaggagccgacaggctgcacgcggagtccggactgccagtggagatg
ttcagcaacccggcgcagatccaccctgtggagctggaactggagaacgagcaggaggag
gaccgagacgcaaaggtcggttgtccatcgcggtgcgaggaggccgagaagccgccgggc
aagcagcagagaaccaggaggaagccccgggtgctcttctctcagactcaagtattcgag
ctggagcgtcgcttcaagcggcagcgctacctgtccgccccggagagagagcacctggcg
ggttcgctcaaactcacgcccacgcaggtgaagatctggttccagaaccggaggtacaaa
tgcaagaggcagcggcaggacaagacactggagatggcaggacatcaccaccaccatcac
catcatcacccaccgggtcctccgccgcctcccccgccgcccaggagggtggccgtgccg
gtgctggtgcgggacggcaggccttgtttgactggatccccgacttataacacgtcctac
tcagcggtgggagcaccgagcgcgtacggctacaacggctacccggcctacagctacaac
aactcggtgtacaccaacacttattcttgtactagtttacctgctctgccgccctccaac
agcgccgccaacgccttcatgaacatgaatttgggaccgctgggcgcgcagacgcaaagt
cagtccgcacaaggagcggtggtccctccgtgccaggggactctgcagggcatcagggca
tggtaa
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