Syngnathus scovelli (Gulf pipefish): 125978667
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Entry
125978667 CDS
T08785
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125978667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125978667
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125978667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
MACPF_SNTX
LepB_N
DUF1186
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
125978667
NCBI-ProteinID:
XP_049592183
LinkDB
All DBs
Position
1:8792498..8809059
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AA seq
1180 aa
AA seq
DB search
METSDFLSSTSSTSSLDDLSDSDDDFELPVKITKRKIQAEASSLPPKKPRHNDALRKLSR
LSCSPNVSSAETSQGHQSFQDTPRPDKRELDSDDPTINAKNIYDAVSSGKSDLMTVVDEW
LDYYKQRHKQGLLVLINFIVQCCGCQGVVSREMLDSMQNAEIIATLTRQFDRSLASYPLS
GAGSSPKRFRAGLCKFASVLVRLCQNSLIYDEYLFASLLSLLTGLSDSQVRAFRHTSTLI
AMKLMSGIVEVVVAVSFQMQTIQRYYNLEMGKDMEDQSSQRLEELQASITELLRKKEELS
SLLNATFRGIFVHRYRDRVVKIRAACMEELGVWIKKNPDNFLNDGCLKYLGWMLNDKQSV
VRLQCVRSLQNLYTEKKFIGHLELFTNRFKKRMLNMVMDKQYEIAVEVIKLLLQIQQNTG
EVLQEEECAHIYTLVYAAQHSLASAAGLFLYLKLKSVIDSENEQGINSAFFQELINFYVQ
CKFHDHGIYLVDSLWDVAAAELKDWECMTTLLLQENDLTNVEEDTLIELMVCAIRRAMEA
TPPVGRIWVKKGLSAKQMKTREQDRQRITTHFIPLLSQLLAKYSADPGKVKLLLQVPLYF
NLDTSSSAQWMEKHLDQILTQICLIVEKHTENAVLEACSKLIDTLCSNSHTFSSRAHLAF
SQLFDNLTEHFYTYYSDLMQAPTDDVFSGAMALKRMAALVSARNLSTERLFDSCTDLLKS
RMESRHFDKELMVAALRCSGFHLMWAKVNLPSLPTKEEVKRLKEEVAFFCQICQECLSIA
QTEIRDQAFELLCDLLLLYRANTVRSEPGLQKVYYVPSHFLTAEMAVFLLDYIFMDEMEE
EADEEAIKHLQKKRRLLAGYCKLVIFGVVDLSAATNVYKYYDKNYKDFGDIIKDTITKTK
LINPVLSARSLCLTVQQVFTEMLVEGVNKRNVDEIKDLAKKLAMTFGNNLQHVRKPLVAL
HMDGIRFAFRGCQEEEEQHSNVAFLELLSEFSFKLLQQDKDLLMDILKSQCPTAALSWDS
VNVYQRSLKGTQAKLGERVEAITSPTMPVTKRQKINTGDKKIIKRQKIDTGGLMANFNST
LDCSSIHSSELPSPILTSTALKQPPTKFGSRGGVYESDVGSGLTEPESDDEFNLESQRPE
MLSTKRLRSTPIQRGLNTQLNLLLLNDDFSEQEEEAESVK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctgattttttgtcgagcacgtcaagtaccagtagcttagatgatttgtct
gattcagatgatgactttgagctcccagtgaaaatcaccaagcgcaaaatacaggcagag
gcaagctcactgccacccaagaagccaaggcacaatgatgctttgagaaaattatccaga
ctgagttgtagcccaaacgtctcttcagcagaaacgtctcaggggcatcagtctttccaa
gacacacccaggcctgacaaaagagaactggacagcgatgacccaactatcaatgcaaaa
aatatctacgatgctgtcagcagtggaaagagtgacctaatgacggtggttgacgagtgg
ctggactactacaagcagaggcacaagcagggactcctggtgctcatcaacttcatcgtt
cagtgctgtggatgccaaggagtggttagcagagagatgcttgattccatgcaaaatgca
gaaatcatcgccacgctgaccagacagtttgataggagtttagcgagctaccctttgtct
ggagcgggttcctcgccgaagcgattccgagcgggcctttgcaagtttgccagcgtcctg
gtgcgcttatgtcaaaacagtctcatttatgatgaatacctcttcgcctccttgctgtct
ctgctcaccgggttgtctgactcccaagtcagagcattcagacacaccagcaccctaata
gccatgaagctgatgtctggaatagtggaggtggttgtggcagtttcctttcagatgcaa
accatccagcgctactacaacttggagatgggcaaggacatggaagatcaaagctctcag
cgtctggaagagcttcaggcttccattacagagctgctgagaaagaaggaggagctctca
tccttgttgaacgccaccttccggggcatttttgtgcaccgctaccgtgaccgtgtggta
aagatcagagcagcttgcatggaggagctgggcgtgtggattaaaaagaaccctgacaac
ttcctcaatgatggatgtctcaaatacctgggctggatgctgaatgacaagcaaagcgtg
gtgcgtctgcagtgtgtgcgaagcctgcagaatctttatacggagaagaagtttattggc
cacctggagcttttcaccaatagatttaaaaagaggatgctcaacatggtgatggacaag
caatatgagattgctgtggaagtgatcaagctgttactgcaaatccaacagaacacgggt
gaagtcctgcaggaggaggagtgcgctcatatctataccctagtttacgccgcacaacac
agtttggcgtctgcagctggcctgttcctctatctgaaactgaaaagtgtgattgacagt
gagaacgagcaaggcatcaattctgccttcttccaagaactcatcaacttctacgtccag
tgtaagttccacgaccatggaatttacctggttgacagcctgtgggatgttgctgctgcg
gaattaaaagactgggagtgcatgacaactcttttgctacaggaaaatgatttgacaaac
gtggaggaggacacactcatcgaattgatggtatgtgcgattcgacgggcaatggaggca
accccaccggttgggagaatctgggtcaagaagggcctcagtgcaaagcaaatgaaaacc
cgggaacaggacaggcagcgtatcacgacccatttcatccctttactgtcacagctgctg
gccaagtattcggcagacccagggaaagtaaaactcctcctgcaagtgccgctctacttc
aacctggatacctccagcagtgcgcagtggatggagaagcatctagaccagatcctgact
cagatatgcctgattgtagagaagcacacggagaacgctgtgctagaggcgtgcagcaaa
ctgatcgacacgctctgctccaacagtcacaccttctcctcccgtgcacacctggcgttt
agtcagttgtttgacaacctgactgagcacttctacacctattacagtgacctgatgcag
gccccaactgatgatgttttcagtggagcaatggccttgaaaaggatggcggccttggtc
agtgccagaaacttatcaactgaaagactatttgattcctgcacggacctacttaaaagt
cggatggaatccagacacttcgacaaggaactcatggtggcagctttgaggtgctcaggc
tttcacctgatgtgggccaaagtaaatctgccctctcttccaaccaaggaggaagtgaaa
cgcctgaaggaagaggtggccttcttctgccaaatctgccaagaatgcttgtctattgcc
caaactgagattagggatcaggcatttgagttgctgtgtgacctcctgttgctttaccgt
gccaatactgtccgctctgaacccggcctgcaaaaagtgtactacgtgccctctcacttc
ttgactgcagagatggcagttttccttctggactacatcttcatggacgaaatggaggag
gaagctgatgaggaggcgatcaaacatcttcagaagaagcgcagactgcttgccggctac
tgtaaattggtcatcttcggcgtggtggacctcagtgctgccaccaatgtctacaagtac
tacgacaagaactataaggactttggtgacatcatcaaagataccataacaaaaacgaag
ctcatcaatcctgtactgagtgccaggagtctctgccttactgtgcagcaggtgttcaca
gagatgctggtagagggggtcaataaaaggaatgttgatgagatcaaagatttggccaag
aagctcgccatgacctttggcaataatcttcaacatgttcgcaaaccgctggtagcgctg
cacatggacggcatacgttttgctttccggggatgtcaggaagaggaagagcagcactct
aatgtggccttcttggagctgcttagcgagttcagttttaagctgctgcaacaagacaag
gacctgctgatggatatcctgaaaagccagtgtcccactgctgccctctcctgggactca
gtcaatgtttatcagcgctccttgaaaggcacccaagccaagttgggggagagagttgaa
gccatcacttcaccaaccatgcctgtcaccaaacgccagaagatcaatactggagataag
aaaataatcaaacgccagaagatcgatactggaggtttaatggccaacttcaactcgact
ttggattgcagcagtatccactccagtgagctgcccagcccgattctcacctccactgcc
ctgaagcagccccccactaaatttgggtccaggggaggcgtctatgaaagtgatgttggc
agcggtttaactgaaccagaatctgacgatgaattcaacttggaatcacagaggccagaa
atgctgtccaccaagagattgagatccaccccaattcagagaggactaaatacccagctc
aacttacttttgctgaatgatgacttctcagagcaagaggaagaagctgagtctgtcaaa
tag
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