Syngnathus scovelli (Gulf pipefish): 125978677
Help
Entry
125978677 CDS
T08785
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
sscv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125978677
04082 Neuroactive ligand signaling
125978677
04519 Cadherin signaling
125978677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125978677
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125978677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125978677
NCBI-ProteinID:
XP_049592190
LinkDB
All DBs
Position
12:complement(865143..885716)
Genome browser
AA seq
460 aa
AA seq
DB search
MGPFVSAGNLFSVLLISRLLESSMLNAEMKEGEILPPTIQKLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAIYETGHYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTYSDSHMLMYGHQMHNFDDEMNGIVTTISS
HSDRTKRRKEPDAGPAAAPASTELAVDPSSTTGSEPKPEASPPEPPNRCLVVLSILRKLL
SFISCCHIENPHYIDNYSRVTFPLSFVLVNLLYWTYYLYF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggtccatttgtatctgcggggaacctgttctctgtgctcctcattagcaggttgctc
gaaagctccatgctcaatgcagaaatgaaggaaggtgaaattttgcctccaaccattcaa
aagctgatgaaaggctataacaagtacctgaggcctttctttgacaatggtcctgtaact
gttggtatgagcttggacattgctagtattgacaccatttcagagatcaatatggactac
acagccaccatattccttcggcagcgctggacggacgagcgattggtgtttgaaggcaac
aagagcctgagccttgacggacggcttgtggagctcctctgggtccctgataccttcatc
gtggactccaagaagtctttccttcatgacatcactgtggagaaccgattgattcgcatc
tttccaaatgggaccgtcctttatgcgctgagaattaccaccactgtggcctgtaacatg
gatttgaccaagtatcccatggacaagcaaacctgcacactacaactggagagctggggt
tacaatatcaatgatgtcatgttctactggaccagaggaaatgagtctgtcagtggccta
gacactcttcaacttgctcaatatacagtggaagaccactacacttctgtgtcagaggct
atctatgaaactggtcactaccccaagctggtcttccactttgagctaaagaggagcatc
ctgtacttcatcctggagacatacgttccatcaagcctgttggtggtcctctcttgggtc
tccttctggatttccctgtcctctgtcccagctcgaatttgtatcggagtgacaacagtg
ctgacaatgaccactctgatgatgggagctcgcacgtcgctccccaacgccaactgtttc
atcaaggccattgacgtgtacttaggaatctgcttcagctttatctttggagccctcatc
gagtatgctgtggctcatttctgcaccctcacttacagtgactcgcacatgctcatgtac
ggccaccaaatgcataactttgacgacgaaatgaacggcatcgtcaccaccatctccagc
cactctgacaggaccaagagacgcaaggaacccgacgcaggtcccgcagccgctcccgcc
tccaccgagctggcggtcgacccatccagcacgacaggcagcgagcccaagcctgaggct
tcccctccagaaccccccaaccgctgtctggtggttctgtccatccttcgtaaacttctc
agtttcataagctgctgtcacatagaaaatccacactacatagacaactactcaagagtc
actttccccctctcatttgttctcgttaatcttctttactggacgtattatttgtacttt
tag
DBGET
integrated database retrieval system
