Syngnathus scovelli (Gulf pipefish): 125978697 Help Entry 125978697         CDS       T08785                                  Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism sscv  Syngnathus scovelli (Gulf pipefish) Brite KEGG Orthology (KO) [BR:sscv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sscv03037]     125978697    04515 Cell adhesion molecules [BR:sscv04515]     125978697 Cilium and associated proteins [BR:sscv03037]  Primary cilia and associated proteins   USH complex and associated proteins    125978697 Cell adhesion molecules [BR:sscv04515]  Cadherins   Major cadherins    125978697 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C PCDH15_12th Sde0182_C ATP1G1_PLM_MAT8 Motif Other DBs NCBI-GeneID:  125978697 NCBI-ProteinID:  XP_049592229 LinkDB All DBs Position 12:10686042..10716151 Genome browser AA seq 1966 aa AA seqDB search MEQQKVTITILDENDNSPEFDITSDTSVDILENTAMGKKVAVVLGRDRDTGLNGLVNFTL VAGNMEDVFKIKTVNHTYGEVFVNAPLDRESVDRYLLKVRAADNGSPPRHTDHSLTINIL DVNDNAPIVESPRGYNVSISENVGGGTSVLRVMATDWDTGPNAMLFYYITAGNQDLTFRM DRMTGEMVTRPAPPDRERQQEYRLIVTVEDDGMPPLSTSTTINVRIVDENDNAPEFPEEE YVTVLSEGPDTVGATIAIVTAIDPDEDLNGTLRYAITHGNLVQTFHINSNTGRITAVKEL DYEISHGHYALVVTATDQSPNPAHRLTSSTTVLVNVLDVNDVTPTFPRPYEGPFEVTEGQ PGPRVWTLKATDEDSGLNGKVEYSITGGNNQNEFMISPVEGELRVRKDVELDRETTTFYN ITVTARDLGTPSRNSSVVVGVQVRDINDNDPILLNLPHNTSVSEGASIHTSVARVRAKDA DSGLNALLTYNITAGNQDGAFYINDTSGVVQVNRPLDRERVAEYRLTITVKDNPENPRIA RRDSDLLVITILDENDNRPIFTRNSYRAEITENSAAGSNVTVLNGPVLAVDKDIGRNAVV KYRLFGARVDLFTVDADTGVIRVQRGAKLDREAFQEPRIELILVGEDIGGLNSSVPFTVT ILDQNDNPPVFNPSSFSVRLPENSPTGVVVTQLSAMDADSGSNGWLTYRLVSGAQDRFVV DAISGAVLVGNSTLDREERGSYRLVVMATDRGTPPMSGTATLTVILDDVNDSRPRFIEPL TMINVNESTPPGVVVATLTAEDPDLHPRLEYYIISVEAKDDGNNPVDGLQESFGIDLHTG AVFVRNPLNREQVATFEIIVSVHDNASEVIDKSGSVPNARLTINILDVNDNAPRFRPFGV TNFTEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRGGYVRLEDPSTGKIVANQ TVDFEQVQWLNFTIRARDHGSPPRIAELPVFLRIVDVNDNNPVFLQPSYQEPVFENVNLG TTIVRVSATDADSGLFAVVEYSLVDGEGKFGIKPKTGEIYILSPLDRETKDHYTLTAVAR DNPGGSSNNRRENSVQVLVTILDVNDYRPRFSERVFTTSVFENEPSGTSVITVKASDLDE GENGAVLYSLLGPHSDAFSLDPNTGLVRSRRLLQSSESFNLTVVATDQGRPPLWTTADLI ITVIDVNDNRPVFVRPTNGTTIHISEEQPPGLPVYEVYATDSDEGVNGEVRYGFLQTGGG NRDWENFHIDATSGVITTTVKLDREKQSLHSLIIVARDMGQPVPYETTQPLQVALLDIDD NEPVFLKPPRGSLPYQKLSVPEHSPPGTVVGNVTRAVDADEGPNAIVYYFIAGGNSDGNF GLSLDGELKLYRELDREEIPVYSIIIKASSNKSWSPSRGQRASQAKALDPARDPSLLEVR IELEDINDQKPRFAKAEYTAGVAANAKVGSELIKLVAIDNDIGNNSLVQYHIVTIRYFPS QSNGSEDVGSIFIIGLTDGIIRTYDLFTAYSPGYFQLEILACDLAGHSTTTNVNIYILRD DQRVKIVFNEIPDLVRENQDEFINLLSNITGAVVNLDDIQFHVDKKGRVNYAQTDMLVHM VNNQSNTIQDVERVIQMIDENKEQLRNLFRKYNVVDVQPAVTDKLPDDITTLQLVIIILA VLLCLAGILFVSMNWHYRRVHQRKLKAIVAGSSGNQGLMDILDMPNTNKYSFEGANPVWL DPFCHNLELAAQADHEDDLPENLSEITDLWNSPARTHGTFGREPQAKPDDDRYLRAAIQE YDNIAKLGQIMREGPIKGSLLTVVLDDYLRLKKLFAARLVTVSTSQGENSSVTELIQSDL DDDEEERRSMGGGRGTLRFKHKLPMELKGPEGVHVVHGSTGTLLTSDLSSLPEDDQRALA RSLEALNADGGIYSERNARTESAKSTPMHRHKDGEVPESPLEITEL NT seq 5901 nt NT seq  +upstreamnt  +downstreamnt atggaacaacagaaggtgaccatcaccatacttgatgagaatgacaacagtccagaattt gacatcacatctgatacttcagtggacattctggaaaacaccgccatgggaaagaaagtg gccgtagttctgggaagagatcgagatacaggactgaatggactggtcaactttacttta gtcgcgggcaatatggaagatgtgtttaagatcaagacggtgaaccacacatatggggag gtcttcgtcaatgctccactggacagagagtctgtggatcgctacctgctcaaggtgcgc gctgcagacaatgggtcacctccacgacacacagaccactccctcaccatcaatattcta gatgtcaatgacaatgcacctattgttgagagtccaaggggctacaatgtcagcataagc gagaatgtcggcggagggacatcagtcctgcgtgtgatggctacagactgggacacgggt cctaacgccatgctgttttattacatcacggccggaaaccaagacctgaccttccgcatg gaccgcatgacaggagaaatggtgacacggcccgcccctcctgatcgagagcgtcaacag gagtacagactcattgtgactgtggaggatgatggcatgcctcctctgtcgacttccacc accatcaacgttcgcattgtggatgaaaatgacaacgcccctgaatttccagaggaggag tatgttacagtgctgagtgagggccctgacacagtgggcgccaccatcgctatagtaacg gccattgatccggatgaggatctgaatggcactttgcgatatgccatcactcatggcaac cttgtccaaacttttcatatcaacagcaatactgggaggatcacagctgtgaaggagctt gactatgagatcagtcatggacactatgctctggtggtcacagcgacggatcaaagtcca aatcctgctcatcgcttgacatctagcacaacggtgctggtcaacgtactggatgtgaat gatgtgactcccactttcccgagaccctatgagggaccctttgaggtgaccgagggccag ccgggtcctcgggtctggacactcaaagccactgatgaagactctgggctgaatggcaaa gtggagtacagcatcactggtggaaataatcaaaatgagttcatgatatctcccgtggag ggggaacttcgagtgagaaaggatgttgagttggatcgagagaccactaccttttacaac atcactgtcacagcccgagacctgggcacaccttcacgcaatagctcggttgtagttggg gtccaagttcgagacatcaacgacaacgaccccatcctcctcaacctgcctcacaacacc agtgtgagtgagggcgcctctatccatacatctgtggcacgagtccgagcgaaagatgcg gatagcggactcaatgcgttgctcacctataacatcactgctggcaaccaagatggagcc ttctacattaatgacacatcaggtgtggtgcaagtgaacaggccactagacagagagcga gtggctgagtacagactcaccatcactgtcaaagataatcctgagaaccctcgcattgct cgccgggattcagacctcctggttataactatacttgatgagaatgacaacagacctatc tttaccagaaatagttatagagctgagatcacagagaactctgcagcaggcagtaatgta acagtgttgaatgggcccgttctggccgtagataaagatattggacgcaatgccgtcgtc aagtatcgtctgtttggagcaagggtggaccttttcactgtggatgctgacactggagtt attcgtgtgcaacggggagccaagttggatcgtgaggcgtttcaggagcctcggatcgag ttgatcctagttggggaggacatcgggggattaaacagcagtgttcctttcacagtgaca atcctggatcagaatgacaaccctcccgttttcaacccttctagtttcagtgtgcgactc cccgagaatagtcccaccggtgtcgtggtgacccaactttccgccatggatgctgactcc ggttcaaacggctggctcacgtaccgcttagtaagcggcgctcaggatcgctttgtggtt gacgcgatctccggtgccgttctagtcggcaacagcaccctggatagggaagagcgtggg tcttatcgcctggttgtcatggcaaccgaccgcggcacaccacccatgtccggcacagcc acgctaactgtcatccttgatgatgtcaatgattcgcgaccgcgttttatagagcctctg acaatgattaacgtcaacgagtccacgccgcccggggtggtggtcgccacgttaacagct gaggacccggacctgcatccacgactggagtattatatcatatcagtggaagcaaaagat gatgggaacaatcctgtagatggcctgcaggagtcctttgggattgatttgcacactggt gcagtgtttgtacgcaacccactcaacagagaacaggtagctacttttgagattatcgtg tctgtccatgacaatgccagtgaggttattgacaagtctggcagtgtcccaaacgcaaga ctaaccatcaacattttggatgtgaatgacaacgctcctcgtttccggccctttggagtg acaaatttcaccgagaagattttggagggagcgcagccaggcacaacacttctctctgtt tcagctgtggacccggacaaaggccccaatggccaggtcatctatcagctgctccactta ccacgaggaggttatgtcagactggaagacccctccaccggtaagattgtggccaaccag acagtggattttgaacaagtgcaatggctgaactttacgattcgcgcaagggaccatgga agtcctcctcggattgccgaactgcctgtttttctacgtatagtagatgtcaatgacaac aacccggtttttctacaaccgtcatatcaggagcctgtttttgaaaacgtgaaccttggc acaaccatagttcgtgtcagtgcaacagatgccgattcaggtctctttgctgttgttgag tacagcttagtagacggagagggcaagtttggcatcaaaccaaaaactggagaaatatac attctctctcccttggatagagaaacaaaggaccactacactctaactgctgttgcccga gacaaccctggtgggagctcaaataacaggcgagagaactctgtccaggtcctcgtgaca attctcgacgtcaacgattatcgtccacgtttctctgagagagtattcaccaccagcgtg tttgagaacgagcccagtggaacatcagtgatcacagtgaaggcttctgacctggatgaa ggcgagaatggggcagtcctctacagcctattgggaccccattcagatgccttctctctg gatcccaacacaggacttgtgcgttctcgccgtctgcttcagtcgtctgagagtttcaac ctgactgtggtggccacagaccaggggcgtccccccttgtggacaaccgctgacctcatc atcacagtcatagatgtcaatgacaaccggcctgtgtttgtcagaccgaccaacggaacc accatccatatctcagaggagcagcctccaggcctgccggtgtatgaagtctatgcaaca gactcggacgagggtgtcaacggagaagtgcgctatggcttcctgcagactggaggaggc aacagagactgggaaaacttccatattgatgctacatccggagtcattacaacgacagtc aaattggacagagagaaacagtccttacacagtcttatcattgtggcccgtgacatgggc cagccagtgccttatgaaaccacacaacctctgcaggtggcgctgttggatattgacgac aatgagccagtctttctcaaaccaccacgtggcagcttgccttaccagaagctttccgta ccggaacactcccctcctgggactgtggtggggaatgtgaccagggctgtagacgccgat gaaggccccaatgccattgtttactactttattgcagggggaaacagcgatggaaacttt ggcttgagtctagacggagagctaaagttgtacagggaactggatcgtgaggagatccca gtctattccatcatcatcaaggcctccagtaacaagagttggagtccttccaggggtcaa agggcttcacaggccaaagctttggaccctgcccgagaccccagcttgctggaggtgcgg attgaattagaagacatcaatgaccaaaaaccgcggtttgccaaggcagagtacactgcg ggagtggctgctaatgccaaagtgggctcagagctcattaaactggtggcaattgataat gacatcggcaacaacagcttggtgcagtatcacattgttaccattcgttactttccatct cagagcaacggcagcgaggacgttgggagcattttcattattggtttgactgatggtatc atccgcacctatgacctcttcactgcttacagtcctggatattttcagctagaaattttg gcatgcgacctggcaggacatagcaccaccactaatgtcaatatctacatcctgcgggat gaccagagggtcaagatagtcttcaatgagatccctgatttggtccgtgaaaatcaagat gaattcattaacttgctctccaacatcactggtgctgtcgtaaacctggatgacatacag tttcacgttgacaaaaagggccgggtgaattatgctcagacggacatgctggtacacatg gtcaacaatcaaagcaacaccattcaagatgttgaaagagtcatccagatgattgatgaa aacaaggaacagttgagaaatttgtttagaaagtacaacgtggtggatgttcagcccgcc gtcactgacaaactgcctgacgacatcaccaccctgcagctggtcatcattattctggct gtgctgctgtgcctggcaggaatattgtttgtctcaatgaactggcattatcgcagagtg catcagaggaagctcaaagctatcgttgcgggatcatcagggaaccaaggcttaatggat attctggacatgcccaacaccaacaagtactcctttgagggagctaatccagtgtggctg gatccattctgtcacaatctggagctggccgctcaagcagaccatgaggatgacctgcct gagaacctcagcgagataacggacctgtggaacagccctgcgcgcactcatgggacattc ggccgtgagcctcaagcgaagcctgatgatgatcgttatttgagagcagcgattcaggag tacgacaatattgctaaacttggccagatcatgagggaagggcccatcaagggttccttg ctcacagtggtcctggacgactacctgagactgaaaaaactttttgcagccagactcgtc actgtttccaccagccagggagaaaattcatcagtcactgagctgatccagagtgatttg gatgatgacgaggaagagcgtaggagcatgggtggaggtcgcggcactctgcgtttcaaa cacaagcttcccatggagctgaaagggccagagggcgtgcacgtggtgcacggcagcaca ggcaccctactcacctccgacctcagcagtctgccagaagatgaccagcgggcactggca cgttctctcgaggctctaaacgctgatggggggatttactccgagcgcaacgcccgcacc gagtcggccaagtcgactccaatgcaccgtcacaaggacggcgaggtaccggagagcccc ttggaaatcactgagttatga

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