Syngnathus scovelli (Gulf pipefish): 125978749
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Entry
125978749 CDS
T08785
Symbol
rrbp1a
Name
(RefSeq) ribosome-binding protein 1a isoform X1
KO
K14000
ribosome-binding protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125978749 (rrbp1a)
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Gene cluster
GFIT
Motif
Pfam:
Rib_recp_KP_reg
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Motif
Other DBs
NCBI-GeneID:
125978749
NCBI-ProteinID:
XP_049592330
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Position
12:complement(8910706..8922574)
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AA seq
1346 aa
AA seq
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MDIYDPQTLGILVFGGFMVISAIGIALVSTFSMKETSYEEALAKQRRELGKTQSGSTEKK
KKDKTADKKNRGKKKEEKPNGMIPEAKTNIEKGQAGQVPKPVASPIVATAPASKSAQPKP
KAVKQCPTPTESSPVPESSPIPSPKDKKKKKSAKIEETSTLPQPGKSSSVPSVQATEPAK
AKTVAASAPTKVVPTTSASSKASPVSPSTKSTSKSAPPSAKSGSPSTKSDNVAPASAKST
PASGKSTPASPKSAPAKDKSAPAKDKSAPAKDKSAPAKDKSAPAKDKSAPAKDKSAPAKD
KPAPAKDNSAPAKDKSAPAKDKSAPAKDKSAPAKDKSAPAKDKSAPATDKSAPAKDKSTP
AKDKSAPAKEKSAPAKEKSDPAKDKSAPAKDKSAPAKDKSAPAKEKSAPAKEKSAPAKDK
SAPAKDKSAPSTDKSAPVKDKSTASKDKSTASTDKSAASTDKSGPPKDKSAPPKDKSTPP
KDKSAASTKSGKSTTAVSKSAAAPTKSSAVPAKSAPLLESVIKDVPVMAVPPVGSSAPKP
QEPKKKASKKKSESVEVGDSADTPLYLPYKTLVSTIRSMVFSEREAHSLIEMLSEKGGII
QDTWHIATQKGDPVAMLKKQLEEKAKQLGAQQEDSSAAKNRLRELTKELAAEKSKVASVE
TRLSSQLSKREQEMIALQARMQASYQDHVAQSQKLTAKIVSLQDQIEKGPNAQLARLQQE
NSILRDALNQATSQAESKQNAELAKLRQECAKLTKELGEKTEILHTDEHVRRGLEAKVSA
TEKQLSLLQANHAESQQGLQRKLEEVCEELRTTQTAKNTLQDSLKKAQQDTSALTEFQVR
MGNLEAQVKERAAQVDTLTAQLEGTQVEKQQLVQQLASVNSLLEASKSEKQQASEQQINA
AELQQLKLSLQERDNQLNTLQEELKQFQIKKAAAENTISELEQRLKSEDAGLIASLQDEL
KNLKEMVQVKDTTQSDVSAEQIKSSLTAKEALVISLQEQLKESKQNEAAMIQLKAFESET
KESLQKLFPLVSLETQQPNWLQGFTIKAQDVLKQHNQQSKSSQESPELFEKLKEAEENNM
TLQAECEQYRTVLAETEGMLKHLQKSVEEEESVWRSKLSNSEEQLKAALEEVQKFESEKQ
SIKQLKEQMMLLEAQLEKQSDNHCIAEEMEQLRLQLSGSQKQLDLAHKEVQAHKEELAKV
REQLSQVALSGQPEQNGPTVAHPSQVLSEFNQTSEKLQGETAARQKLSEEFQQAQETITE
LQAQLELLRDSAESQQGDSEDVAQLKERLEKEKKLSKDLGQAATKLQHLLKATQEQLSKE
RETVVTLQEHLDTKGEYVELKEGTSV
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggatatctatgacccccagacccttggtatattggtttttggcggattcatggtgatc
tctgcaattgggatcgctcttgtgtctaccttctcgatgaaggagacctcttatgaagag
gctctggcgaagcagcgtagagagttaggtaagacacagtcaggtagcacagaaaaaaag
aaaaaggacaaaacagctgacaaaaagaaccgtggaaagaaaaaggaagaaaagcccaat
ggaatgatccccgaagctaaaacaaacattgagaaaggtcaagctggtcaagtccccaag
cctgttgcttcaccaattgtggctactgctcctgcctctaaatctgcacagccgaagcca
aaagctgtcaaacaatgcccaactcctactgaatcctcacctgtgcccgagtcctcaccc
ataccttcacctaaagacaaaaagaagaagaagtcagctaagattgaggaaacctccaca
ctgcctcaaccgggcaaatcctcatcagttccttcagtccaggccacggaacctgccaag
gccaaaactgtagccgcctctgctccaaccaaagtagttcccacaacttctgcatcttcc
aaggcttctcctgtttcaccatcaaccaaatctacttctaagtctgctccgccctcggct
aaatcgggttcgccttctaccaaatctgataacgttgcccccgcctctgccaagtccacc
cccgcttcaggcaagtccacaccagcttcacccaagtccgccccggccaaagataagtcc
gccccggccaaagataagtccgccccggccaaagataagtccgccccggccaaagataag
tccgccccggccaaagataagtccgccccggccaaagataagtctgccccggccaaagac
aagcccgccccggccaaagacaactccgccccggccaaagacaagtccgccccggccaaa
gataagtccgccccggccaaagataagtccgccccggccaaagataagtccgccccggcc
aaagataagtccgccccggccactgataagtccgccccggccaaagacaaatccaccccg
gccaaagacaaatctgccccggccaaagagaaatctgccccggccaaagagaagtccgac
ccagccaaggacaagtccgccccggccaaggacaagtccgccccggccaaggacaagtcc
gccccggccaaggaaaagtccgccccggccaaggaaaagtccgccccggccaaagacaag
tccgccccggccaaagacaagtccgccccgtccacagataagtccgccccggttaaagac
aagtccaccgcgtcaaaagacaagtccaccgcgtccacagacaagtccgcggcgtccaca
gacaagtccggcccgcccaaagacaagtccgccccgcccaaagacaagtccaccccgccc
aaagacaagtcagccgcctcaaccaaatcaggaaagtctaccacggctgtatccaagtct
gctgctgctccaaccaagtcttcagcggtacccgccaagtctgccccacttcttgaatct
gtcattaaagatgttcccgtcatggctgtacctccagttgggtctagtgcaccaaaaccc
caggagcccaagaagaaggcctccaagaaaaaatctgagagtgtggaagttggggattcc
gctgacactccactgtatctaccctacaagactttggtgtccaccatcaggagcatggtc
ttcagtgagagagaagctcacagcctcatcgagatgttgtccgagaaaggcggtatcatc
caggacacctggcacatagccactcagaaaggagacccagtggccatgctaaagaaacaa
ttggaggagaaggcaaaacagctgggggctcagcaagaagactcctctgcagctaagaac
cgtctgagagagctgactaaggagctggctgctgagaagtccaaggtggctagtgttgag
accaggctgagctctcagctaagcaagagggagcaggaaatgattgctttgcaagctcgc
atgcaggccagctaccaggaccatgtagcacaatcccagaagctcactgccaagattgtc
agcctgcaagatcagatagaaaaaggtcccaatgcccagctggcccgtctccagcaggag
aactctatcctccgtgatgctctcaaccaagctaccagtcaggctgagagcaaacaaaat
gcggagctagccaaactgcgtcaggaatgtgcaaagctaaccaaggaacttggagagaag
actgaaattctgcatactgacgaacatgtgaggagagggttggaggccaaggtctctgcc
acagagaagcagctgtctttgctgcaggccaaccatgcagagagccagcaagggttgcaa
aggaaactggaggaggtatgtgaggagctgagaactacacaaactgcaaaaaacaccctg
caggactctttgaagaaggcccagcaggacaccagtgcactcacagagtttcaggtgcga
atgggaaatcttgaagctcaggtcaaggaacgcgccgctcaggtggacactctcactgct
cagctagagggaacacaggttgagaaacaacagcttgtgcaacagttggcgtccgtcaac
tctttgcttgaggccagtaagagtgaaaagcaacaggcgtctgagcagcagataaatgct
gcagaactgcagcaattgaagctcagcctgcaggagagggataaccagttgaacactctt
caagaggaactgaaacaatttcagataaagaaggcggcagcggagaacacaatttctgag
ctagagcagagactcaagagtgaggatgccggcctcatcgcctcgcttcaagatgaactt
aaaaaccttaaagagatggtacaagtaaaggacactacacaatcagatgtctctgcagaa
cagataaagagcagtctgacagcgaaggaggcccttgtcatatcactacaagagcagctg
aaggagtcaaagcaaaatgaagctgcaatgatccagctaaaagcttttgaaagtgaaacc
aaagaatctctccaaaaactcttcccacttgtatctttagaaacacaacagccaaattgg
ttgcagggttttacgatcaaagctcaggatgttcttaaacagcacaaccaacaatccaag
tcaagtcaggaatcccctgagttgtttgaaaagctgaaggaggcggaggagaacaacatg
accctgcaagcagagtgtgaacagtacaggacagttttagctgaaacggaaggaatgctg
aaacatctgcagaagagtgtggaggaggaggagtcggtgtggaggtctaaattgtcgaac
tccgaggagcaattgaaagcggctttagaagaagtacaaaagttcgagtcagagaagcaa
agtataaagcagttgaaagagcagatgatgcttctggaagcacagctagagaagcagtca
gataatcattgcatcgctgaggagatggaacagctaagattgcagctgtctggcagtcag
aagcagctggacttggcccacaaggaggtccaggcacacaaggaggaacttgctaaggtc
agagagcagctgagccaagtcgcgttgagcggccagcccgaacagaacggccccacagtg
gctcatccgagtcaggtattgtccgagttcaatcagacaagtgagaagctgcaaggggag
acggctgcgagacagaagttgtctgaagagtttcagcaggcccaggaaaccatcacagag
cttcaagcgcaactggagcttctgagagattcagcagagtcacagcaaggtgactcggaa
gatgttgctcagctcaaggaacgtctggagaaggagaagaagttgtccaaagacctgggc
caggcagccaccaagctccagcaccttctcaaagcaacacaggagcagctgagtaaagaa
cgagagacggtggttacactacaggagcacctagataccaagggagagtatgtggaatta
aaggagggaacatccgtctga
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