Syngnathus scovelli (Gulf pipefish): 125978756
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Entry
125978756 CDS
T08785
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125978756 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978756 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125978756 (snx5)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Macropinocytosis
Sorting nexins
125978756 (snx5)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125978756 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF6664
Motif
Other DBs
NCBI-GeneID:
125978756
NCBI-ProteinID:
XP_049592346
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Position
12:complement(8924573..8930398)
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AA seq
398 aa
AA seq
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MTATLDESDKEKMRSVSVDLNNDTSLLIDIPDALCERDKVKFTVHTKTTLNSFQKPEISV
PRQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMK
QELEAEYLAVFKKTVQVHEVFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKEMFGG
FFKNMVKSADEVLISGIKEVDDFFEQEKMFLLDYYSKIKDSTAKAEKMTRTHKNIAEDYI
QISSTLNSLSAEDSTTNRKHMEKLSDLFEKLRKVEGRVASDQELKLTELLRYYMRDIQAA
KDLLYRRARALADYENSNKALDKARLKSKDIPQAEEHQQLCLQKFDKLSESGKKELTSFK
GRRVVAFRKNLIEMAELEIKHAKNNVTLLQGCIELLKN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacagccactttagacgaaagcgacaaggaaaagatgcgctctgtgtctgttgacctc
aataatgacacatctctgcttattgacattcctgatgcactctgtgaaagagacaaagtc
aagtttacggtccacacaaagactacacttaatagtttccagaagccagaaatctcggtt
cctcggcagcatgaagatttcatttggttacatgacacgctggtggagacggaggactac
gctggcctaataatcccaccggcacccccaaagcctgactttgaaagcccaagagagaag
atgcacaaattgggagaaggtgaagccactatgaccaaggaagagtacactaaaatgaag
caagagctggaagctgagtacctggctgtgttcaagaaaactgtccaagtccatgaggtt
ttcctgcagagactctcttctcatcccattctaagcaaagacagaaactttcagattttc
ctagagtatgaccaggatctcagtgtcagaagaaagaatgccaaggagatgtttggagga
ttctttaagaacatggtgaagtcagctgatgaagtccttatctcaggaataaaggaagtc
gatgacttttttgagcaggagaagatgttccttctcgactattacagcaagattaaagat
tccactgccaaagcagaaaaaatgacccgcacgcacaaaaatatcgcagaagattacatt
cagatctcatccactctgaattctctttcagcagaagatagcacaactaataggaagcat
atggagaagctctcagatctttttgagaagctcagaaaagtggagggaagagtagcatct
gatcaagagctcaagctcaccgagttgctaagatattacatgcgagatatccaggcagca
aaggatcttctctaccgacgagctcgcgcattagctgactatgagaactccaacaaggcc
ttggataaggctcgactgaaaagcaaggacattccccaggctgaggaacaccaacagctg
tgtctacagaaatttgacaagctttctgagtctggaaagaaagagctcaccagtttcaaa
ggcaggcgagttgtggcatttagaaagaatctcattgagatggccgaactggagattaaa
catgccaagaacaatgtgacactattgcaaggctgcattgaactgctcaagaactga
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