Syngnathus scovelli (Gulf pipefish): 125978804
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Entry
125978804 CDS
T08785
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125978804 (tial1)
03041 Spliceosome [BR:
sscv03041
]
125978804 (tial1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125978804 (tial1)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125978804 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125978804
NCBI-ProteinID:
XP_049592477
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Position
12:complement(4950340..4956583)
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AA seq
375 aa
AA seq
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MDDDCYPRTLYVGNLSRDVTETLVLQLFTQIGQCKSCKMITEHTTNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVRAAFAPFG
KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIAHMGGQWLGGRQIRTNWATRKPPAPK
NSLDNGSKQLRFDDVVSQSSPQNCTVYCGGIQSGLSDTLMRQTFSPFGQIMEIRVFPEKG
YSFIRFSTHDSAAHAIVSVNGTGIEGHIVKCYWGKESPDMTKGSQQVEYGQWGQWNQLYG
SPQQQYGQQYVSNGWQVPSYNMYGQSWNQQGFGVEQSQSPGWVGGFGSQSAQASGSASSV
VSNMTNFNMTGYQTQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgattgctaccccagaacactgtacgtgggaaacctctccagggatgtgact
gaaactctggttttacaacttttcacacaaatagggcaatgtaaaagttgtaaaatgatc
acagagcatacaaccaatgatccctattgctttgtggaattctttgagcatcgagatgct
gcagcagccctagcagctatgaatggaagaaaaatacttggaaaggaagtcaaagtcaat
tgggccaccactcccagtagccaaaagaaagacacatccaatcatttccacgtgtttgtg
ggtgatctaagccctgagatcaccactgaagatgtgagggctgcgtttgcaccttttggg
aaaatctcagatgctcgtgttgtgaaggacatggcgacaggcaaatcaaaggggtatgga
tttgtgtccttctacaacaaactggatgcggagaacgccatcgctcacatgggagggcag
tggctcggaggacgccaaatcaggaccaactgggcaacacgaaaaccacctgctcccaaa
aattcactggacaatggctcaaaacaattgcggttcgatgatgttgtgagccaatccagt
ccacagaactgtactgtgtactgtggaggtatccagtcaggattatcagatacattaatg
cggcagaccttctcaccatttggacagatcatggaaatcagagtcttcccagagaaagga
tattctttcatcaggttttccacccatgacagtgctgcccatgccattgtgtcagttaac
ggcacgggcatcgaaggacacatcgtgaagtgctactggggcaaagaatctcctgacatg
actaaaggttcgcagcaggttgaatatggtcagtgggggcagtggaatcagctctatgga
agtccgcagcagcaatatgggcaacagtatgtgtctaatggatggcaagttccctcctac
aacatgtatggccagtcatggaaccaacaaggctttggtgtagaacagtcccagtcaccc
ggctgggtcggaggattcggctctcaatcagcccaggcttcaggttctgcaagttcagtc
gtgtctaacatgaccaacttcaacatgactggttatcagacacagtga
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