Syngnathus scovelli (Gulf pipefish): 125978819
Help
Entry
125978819 CDS
T08785
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978819
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Ferlins
125978819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
Peptidase_C41
Motif
Other DBs
NCBI-GeneID:
125978819
NCBI-ProteinID:
XP_049592528
LinkDB
All DBs
Position
12:complement(3206888..3222699)
Genome browser
AA seq
2060 aa
AA seq
DB search
MLRVIVESACGIPKKILGNPDPIVSVIFRGEKKKTKAVDNELNPVWNEGLEFDLKGLALD
TSSFIDVVVKDYETIGHHKFIGSAKISLKDLAGGHARSLPSKNVPLSNEKQQPIGATINL
LIGYEPPGEAADGDTTHVDSAAYEETDEADADVDVGDHAGSPAGPGTPVQRVKASHKPLR
IGRKKHRALANKPQDFQIRIRVIEGRQLPGNNVKPVVKVNVCGQTHRTRIRSGNNPFFDE
IFFYNVNMLPSELLDESISLRVYDSFSLRADSLMGEFKLDVGFIYDEPGHAILRKWLLLS
DPDDSSSGAKGYLKVSIIVVVTGEEPPTEKRELSEDQDDVESNLLVPAGITMRWATLSLK
VFRAEDMPQMDDAFVQTVKQVFGGDGDRKNLVDPYLEVSFAGKKLCTRIIEKNANPEWNQ
VIHLQVKFPSMCERIKLTMFDWDRVSKDDAIGTTYLNLSKISSAGRELEDTEGDLCNSMS
EYTQGERCNSPSESITATSESGFLPTFGPCYVNFYGSPREFTGLPDPYEELNLGKGEGVA
YRGRLLVELSTLLDGKVDKNIDDISSDDVLVAQKYQRRRKFSLCAVFHSACMLQEPGEPI
QFEVSMGNYGNKLDSTCKPLASTTQYGFAVFDGNHYYYLPWADTKPVVTLTSSWEDIGHR
LDAVNILLSIAERLEHNLSSLKRAIQSKVAEDQLVEIWLKLISHLLEDLNSFQLPEVESQ
PHVTTLDLQIKNMRDAALESLQQAANCMREEATDVKATVSDIEDWLDRIKQLADEPQNSM
PDVIIWMLRGEKRVAFARVPAHRILYSNFSEQACGKHCGRMQTIFMQYPMDKKKGVKIPV
QLRVNMWLGLSALEKKFNSFSEGNFSVYAEMYENQAQLFGKWGTNGLVGRHKSSDVTGKV
KLKKERFLPPRGWEWDDDWFVDPERGLLTEADAGHTEFTDEVFQNETRFPGGEWKPAGEP
YTDVNGEKAQSPSEIECPVGWTWEDDWSFDSNRAVDEKGWEYGVTIPPDDKPKTWVAAEK
MYHIHRRKRLVRPRRKISDKTIADPRREIGEGWEYSSLIGWKFHRKERSSDTFRRRRWRR
KMVPSDRIGASAIFRLEGALGVDVDDEKPSKTDASKLFGANTPTISCHFSRSYIYQLRVY
VYQARNLCAMDKDSFSDPYAHVSFLHLSKTTEVISATLNPTWDQSLIFDDVEIYGDPQTI
ARNPPDVVLELYDSDKVGKDEPMGCCMVPPVVKLNLSVASGNKLQWYPVTKKGRSAGEAL
LAAELLLKDKANEGDLPMAPPRRGDKLYMVPQGVRPVVQLTAIEVLTWGLRNMKSYQLAT
VASPNLIVECGGEIVQTAIIKNFKKNPNFPGSVLLLKVLLPKEEMYTPPIILKVIDHRPF
GRKPVVGQCTIDCLEDFRCDPYRVNNQVCMSARVAMIAAAQDDVVIDIEERPTVKAELQT
EQEEEAVDWWSKFYASIGQQEKCGPYLKKGYDTLQVYDSELEQVEEFQGLTDFCNTFKLS
RGKADGEDDDPSVVGEFKGSFKIYPLPDDPSVQAPPRQFRELPESGPQECLVRIYVVRCI
DLQPKDTNGMCDPYVKISLGRKTVDDRDNYQPNTLNPEIGRMFELSCFLPQDKDLKIAVY
DYDLLSRDEKVGETVIDLENRLLSRFRSCCGIPQTYCVSGMNQWRDQLKPSQILQNVAKI
RGLPPPHFEGDGSTLSFSGNQYRLEDFEETIPTHPHHGPPRERLPLHVLRQQGLVPEHVE
TRTLCSSHQPNLSQGRIQMWVDVFPKRLGLPGSPFDITPRKAKKYFLRAIVWNTTEVTLD
ETSITGENMSDIYVKGWMPGMEDDKQKTDVHYRSLDGDGNFNWRFIFAFDYLPAEQLCVV
SRKEHFWNLDKTEFRIPPKLIVQIWDNDKFSLDDYLGSIELDLLNLISPAKTPQKCSLKM
LPGMIGSNSSKKSVFNSLFSQKSVRGWWPCAIEQNGKKVLAGKVEMTLEIVEEKEMEERP
AGKGREEPNMNPRLEPPNRPDTSFFWFTNPCKTMKFIIWRRFRWLFIIGILLVLVLLFFG
ILLFSLPNYVSMKIVKPFSK
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggtaattgttgagtctgcctgcgggatccccaaaaagatactgggcaaccct
gatccaattgtttctgttatattcagaggtgaaaagaagaaaaccaaagctgttgacaat
gagctaaatcccgtgtggaatgagggactggagtttgatttaaagggattagccttggac
acgtcttcattcattgacgtggttgtgaaagactatgaaactatcggccatcacaagttc
ataggctctgcgaaaatctcactgaaggacttggccggtggccacgcgagatcactcccg
tccaagaatgtgcccttgagcaatgagaagcagcagccaattggggcaactattaatttg
ctcattggctatgaaccacccggggaagcagctgatggcgacacaactcacgtggacagc
gcggcctacgaggagactgatgaggccgatgccgacgtggacgtaggagatcatgcggga
agcccggcgggtccgggcacacctgtccaacgcgtgaaggcgagccacaagccgctccgc
attggtcgcaaaaagcacagagccctggctaataagccccaggatttccagattcgtatt
cgggtcatcgagggccgacaactgcccggcaacaatgttaagccggtggtgaaggtgaac
gtatgcggccagacgcatcggacgcgaataagaagtggcaataaccccttcttcgatgag
atatttttctacaatgtcaacatgctcccttcagagctgttggatgagagcatcagtcta
agggtttatgattccttctcccttagagctgacagtctaatgggcgagtttaagctggat
gttggcttcatctacgatgaaccaggtcatgccattctgaggaaatggttgctgctgagt
gaccccgatgattccagctcaggcgccaaaggttacttgaaagtcagcattatcgtggtg
gtgactggggaagagccaccgactgagaagagagagctgagcgaggatcaggatgacgtc
gaaagtaatcttctggtgccggcaggcatcacgatgcgatgggccacgctcagcctcaaa
gtgttccgtgcagaggacatgccgcaaatggatgatgcatttgttcagacggtaaagcaa
gtctttggcggggatggagacaggaagaacttggtggatccgtatttggaggtcagcttt
gctggaaaaaagctgtgcaccagaatcattgagaaaaatgcaaatcctgaatggaatcaa
gtcatccacctccaagtcaagttcccgtccatgtgtgaacgcatcaagttgaccatgttt
gactgggatcgagtcagcaaggacgacgccatcgggacaacgtacttgaacctcagcaag
atctcctccgctggcagagagcttgaagacacagaaggtgacctttgcaacagcatgtct
gaatacacacaaggtgaacgttgcaacagcccgtctgaatcaatcactgcaacaagcgag
tctggtttcctgccaacatttggaccttgttatgtcaacttctatggcagcccaagggag
tttacgggtctccctgacccgtacgaggaacttaaccttggcaagggtgaaggtgtcgcc
tacagggggaggctccttgtcgagctgtccactctgctggacggaaaggtggataagaac
atagacgatatttccagtgatgacgtcctggtggcacagaaataccagcgtaggaggaag
ttctccctctgcgccgtgttccacagtgcctgtatgcttcaagagccgggcgagcccatc
cagttcgaggtcagcatgggaaactacggcaacaagctagactccacctgcaagcctctg
gcatccaccacccagtacggctttgctgtttttgacggtaaccactattactacttaccc
tgggcggacacaaaacccgtggtaacgctgacttcctcctgggaagatatcggccaccgt
ttggacgccgtcaacattcttctctctattgcggaaagactcgagcacaacctgtcttct
ttgaaaagggccatccagtccaaggtggctgaggaccaactggttgaaatttggctaaaa
ctcatcagtcatttgcttgaggacttgaacagtttccaacttccagaggtggaaagccag
ccccatgtgactacgctggatctccagataaaaaacatgcgtgacgcggcgctggagagc
ctccaacaggcggctaattgcatgagagaggaggccacggatgtcaaggcaactgtcagt
gacatcgaagactggctggacagaatcaaacagctggcagatgagcctcagaatagcatg
cccgacgtgatcatctggatgttgagaggagagaagcgcgtcgcttttgcccgtgtcccg
gctcaccgcattctctactccaacttcagcgaacaagcttgtggcaaacactgcggacgc
atgcagaccatcttcatgcagtacccgatggataaaaaaaaaggcgtcaaaattcccgtt
cagctgcgggtcaacatgtggctcggtctctctgcgttggagaagaagttcaacagcttc
tctgagggaaacttcagtgtatatgcagaaatgtatgaaaaccaggcccagttgtttggg
aaatggggaaccaacggtctggtgggtcgccacaagtcctcagacgtgactggaaaagtg
aaactgaaaaaggagcgcttcctgccaccacgtggatgggagtgggatgacgactggttc
gttgatcctgagcgtggcctgttgacagaagccgacgcgggccacacagagttcaccgac
gaggtttttcaaaacgaaacacgtttccccggtggagagtggaaacctgctggggagcct
tacactgatgtgaatggcgaaaaggctcagagcccctcagagatcgagtgtccagtcgga
tggacttgggaagacgactggagttttgacagcaacagagctgtcgacgagaaaggctgg
gaatacggagttaccattccacctgatgacaaacccaaaacctgggtggcagcagaaaaa
atgtaccacatccatcgtaggaagagactcgttagacccagaaggaagatatcggataaa
accatcgctgatccgaggcgagagataggcgaaggctgggagtattcttccctcatcggc
tggaagtttcatcgcaaagagcgctcgtccgacacgttccgtcgccgacgctggcgaagg
aagatggtcccgtcggaccgcatcggggcatccgccatcttcaggctggaaggcgcactg
ggggttgacgtggacgacgagaagcccagtaaaacggatgcttccaaactatttggtgcc
aacactcccaccatttcctgccactttagccggtcttacatttaccagctgcgagtctat
gtgtaccaggcgaggaatctttgtgccatggacaaggacagcttctcagatccgtacgcc
cacgtgtcattcctccatctgagcaagaccacagaagtcatcagtgccacgttgaacccc
acctgggatcagagtctcatctttgacgatgttgaaatctacggagacccacaaaccatc
gcccgcaacccgccagacgttgtcctggagctttacgacagcgacaaagtgggtaaagat
gagcccatggggtgctgtatggtcccccctgtggtcaaactcaacctcagtgtcgcttct
ggcaataaactgcaatggtaccccgttaccaagaaaggccgcagcgctggagaagcactg
ctggcggctgagcttctactgaaggacaaggcgaacgaaggagatcttcctatggctcct
cctcgacgaggggacaagctctacatggttcctcaaggagtcagacctgttgtgcaactc
actgccattgaggtcttgacttggggcttgaggaacatgaaaagctaccagctggccacg
gtcgcttctcccaacttgattgtggaatgcggcggcgagatcgttcaaacggccatcatc
aagaatttcaagaagaaccccaacttccctggatccgtcctgctactcaaagtgcttctc
cccaaagaagagatgtacactccccctatcatcctgaaggtcatcgaccacagacccttc
gggaggaagccggtggtgggtcagtgcaccatcgactgcttggaggacttccgctgcgac
ccctatcgagtcaacaatcaagtctgcatgtcggccagagtggcaatgatagcggccgct
caagatgacgttgttatcgacatcgaggagaggccgactgtcaaagctgagcttcaaact
gagcaggaagaggaagcggtcgactggtggagtaaattttacgcctctattggacagcag
gagaagtgcgggccttacctgaagaagggatacgacacgttacaagtctatgattctgag
ctggagcaagtggaagagtttcagggactcactgatttttgcaacacttttaaactctcg
cgaggaaaggcagacggagaggacgacgatccttcagttgtgggagagttcaagggctcg
ttcaagatctacccgctacccgacgacccgagcgttcaggctcccccccgacaattccga
gagcttcccgaaagcgggcctcaggagtgtctggtcagaatatacgtggtgcgctgtatt
gacctgcagcccaaggacacaaacggcatgtgcgatccgtacgtgaagatttccctcggg
aggaaaactgtggatgacagagataactaccaaccaaacactctcaatccagaaatcggg
aggatgttcgagctgtcctgctttttgccacaagacaaggatctgaagatcgcagtctac
gactacgacttactgagccgggatgaaaaagtaggcgagaccgtcatcgatttggagaat
cgactgctgtcccgtttcaggtcctgctgtgggataccgcagacctattgcgtctctggg
atgaatcagtggagagaccagctgaaaccttctcagatcctccagaatgtggccaagatt
aggggccttcctcctccacactttgagggagatggaagcactctgtctttttcggggaac
caatacaggctggaggattttgaggaaaccattcccactcacccccaccatggcccgcct
agagagagactgcctctgcatgtcctccgacagcagggtttggtacccgagcatgtggag
accaggaccctgtgcagctcccatcaaccaaacttgtcccaggggcggattcaaatgtgg
gtggacgtctttcccaaacgcctcggtctgccgggatctccgtttgacatcactccacgg
aaagccaagaagtactttttgcgtgccattgtttggaacacaactgaagtgactctggat
gaaacaagcatcacgggagaaaacatgagcgatatctatgtgaaaggttggatgccagga
atggaggacgacaaacagaagacagacgttcattacagatcactggacggcgacggcaat
ttcaactggaggttcatctttgctttcgactacctgcccgccgagcagctgtgcgtggtt
tccagaaaagagcacttttggaatctggacaagaccgagttcaggatacctcccaagttg
atcgtacagatatgggacaatgacaaattctccttggatgactacttgggatcaattgaa
ctggacttactcaatctaatctcccctgcaaagaccccgcaaaagtgcagcttgaaaatg
ttgcccgggatgatcggctccaactcatccaagaagtccgtcttcaactcactcttctcc
caaaagtcggttcggggctggtggccgtgcgccattgagcagaacgggaagaaagtcctt
gccgggaaagtagaaatgacactggaaatcgtggaggagaaggagatggaagagagaccg
gcagggaaaggcagagaagagcccaacatgaacccaagactagagccacccaaccgtccc
gacacgtcgttcttctggtttacaaacccttgcaagaccatgaagtttatcatatggcga
agattcagatggcttttcatcatcgggatcctactggtgttggtcttactcttcttcggg
attcttttgttttctctacctaactatgtttccatgaaaattgtgaagcccttctccaag
tga
DBGET
integrated database retrieval system
