Syngnathus scovelli (Gulf pipefish): 125978820
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Entry
125978820 CDS
T08785
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978820
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Ferlins
125978820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
125978820
NCBI-ProteinID:
XP_049592532
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Position
12:complement(3185021..3206887)
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AA seq
2027 aa
AA seq
DB search
MLRVIVESACNIPKKILGNPDPIVSVIFRDETKKTKAVDSELNPEWNARLEFDLKGLALD
TSSFIDVVVKDYETIGRDKFIGSAKISLKDLAGGHARSLPSKNVPLSNEKQQPIGATINL
LIGYEPPGEAADGDTTHVDSGDHATPVQRVKASHKPLRIGRALANKPQEFQIRIRVIKGR
QLPGNNVKPVVKVNVCGQTHRTRIRSGNNPFFDEILSYNVNMLPSELLDESISLRVYNSF
SLRADSLMGEFKLDVGFIYDEPGHAILRKWLLLSDPDDSSSGAKGYLKVSIIVVVTGKEP
PTEKRELSEDQDDVESNLLVPAGVTMRWATLSLKVFRAEDMPQMDALAVFGHRDRKNLVD
PYLEVSFAGKKLCTRIIEKNANPEWNQVIHLQVKFPSMCERIKLTMFDWDRFSKDDAIGT
TYLNLVKISSAGRELEAITATSESGFLPTFGPCYVNLYGSPREFTDLPDPYEELNLGKGE
GVAYKGRLLVELSTLLDGKVDKNIDDISNDDILVAQKYQRKRKFSLCAVFHSACMLQEPG
EPIQFEVSMGNYGNKLDSTCKPLASTTQYGFAVFDGNHYYYLPWADTKPVVTLTSSWEDI
GHRLDAVNILLSIAERLEHNLSSLKRAIQSKVAEDQLVEIRLKLISHLLEDLNSFQLPEV
ESQPHVTTLDLQIKNMRDATLESLQQAANCMREEATDVKATVSDIEDWLDRIKQLADEPQ
NSMPDVIIWMLRGEKRVAFARVPAHRILYSNFSEQACGKHCGRMQTIFMQYPMDKKKGVK
IPVQLRVNMWLGLSALEKKFNSFSEGNFSVYAEMYENQAHFFGKWGTKGLVGRHNSSDVT
GKVKLIKERFLPPRGWEWDGDWFVDPERGLLTEADAGHTEFTDEVFRNETRFPGGEWKPA
GEPYTDVNGEKAQSPSEIECPVGWTWEDDWSFDSNRAVDEKGWEYGVTIPPDDKPKTWVA
AEKMYHIHRRKRLVRPRRKISDKTIADPRQEIGEGWEYSSLIGWKFHCKERSSDTFRRRR
WRRKMVPSDRNGPSAIFRLEGALGVDVDDEKPSKTDASKLDDEKPSKTDASKLDDEKPSK
TDASKLFGANTPTISCHFSRSYIYQLRVYVYQARNLCAMDKDSFSDPYAHVSFLHLSNTT
EVISATLNPTWDQSLIFDHVEIYGDPQTIARNPPDVVLELYDRDKVGKDEPMGCCMVPPV
VKLNLSVASGNKLQWYPVTKKGRSAGEALLAAELLLKDKANEGALPMAPPRRGDKLYIVP
EGVRPVVQLTAIEVLTWGLRNMKSYQLAPVASPSLIVECSGEIIQTAIIKNFKKNPNFPG
SLLLLKVLLPKEEMYTPPIILKVIDHRPFGRKPVVGQCTVDCLEEFRCDPYRVNNQVCMS
ARVAMIAAAQDDVVIDIEERPTVKAELQTEQEEEAVDWWSKFYASIGQQEKCGPYLKKGY
DTLQVYDCELEQVEEFQGLTDFCKTFKLSRGKADGKDDNPSVVGEFKGSFKIYPLPEGVQ
APPRQFRELPESGPQECLVRIYVVRCIDLQPKDPNGMCDPYVKISLGRKTVDDRDNYKPN
TLNPEIGRMFELSCFLPQDKDLKIAVYDYDLASRDDKVGETVIDLENRLLSRFRSCCGIP
QTYCVSGMNQWRDQLKPSQILENVAKIRGLPPPHFEGDGSTLSFSGNQYRLEDFEETIPT
HPHLGPPRERLPLHVLRQQGLVPEHVETRTLCSSHHPNLSQGRIQMWVDVFPKRLGLPGS
PFDITPRKAKKYFLRAIVWNTTEVTLDETSITGENMSDIYVKGWMPGMEDDKQKTDVHYR
SLDGDGNFNWRFIFAFDYLPAEQLCVVSRKEHFWNLDKTEFRIPPKLIVQIWDNDKFSLD
DYLGSIELDLLNLISPAKTPQKCSLKMLPGMIGSNSSKKSVFNSLFSQKSVRGWWPCAIE
QNGKKVLAGKVEMTLEIVEEKEMEERPAGKGREEPNMNPRLEPPNRPDTSFFWFINPCKT
MKFIICRKFKCFFIFGILLVLVLLFFGILLFSLPNYVSMKIVKPFSK
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggtaattgttgagtctgcctgcaacatccccaaaaagatactgggcaaccct
gatccaattgtttctgttatattcagagatgaaacgaagaaaactaaagctgttgacagt
gagctaaatcctgagtggaatgcgagactggagtttgatttaaagggattagccttggac
acatcttcattcattgacgtggttgtgaaagactatgaaactatcggccgtgacaagttc
ataggctctgcgaaaatctcactgaaggacttggccggtggccacgcgagatcactcccg
tccaagaatgtgcccttgagcaatgagaagcagcagccaattggggcaactattaatttg
ctcattggctatgaaccacccggggaagcggctgatggcgacacaactcacgtggacagc
ggagatcatgcaacacctgtccaacgcgtgaaggcgagccacaagccgctccgcattggt
cgagccctggctaataagccccaggaattccagattcgtattcgggtcatcaagggccga
cagctgcccggcaacaatgtcaagccggtggtgaaggtgaacgtatgcggccagacgcat
cggacgcgaataagaagtggcaataaccccttcttcgatgagatactttcctacaatgtc
aacatgctcccttcagagctgttggatgagagcatcagtctaagggtttataattccttc
tcccttagagctgacagtctaatgggcgagtttaagctggatgttggcttcatctacgat
gaaccgggtcatgccattctgaggaaatggttgctgctgagtgaccccgatgattccagc
tcaggcgccaaaggttacttgaaagtcagcattatcgtggtggtgactgggaaagagcca
ccgactgagaagagagagctgagcgaggatcaggatgacgtcgaaagtaatcttctggtg
ccggcaggcgtcacgatgcgatgggccacgctcagcctcaaagtgttccgtgcagaggac
atgccgcaaatggatgcattggcggtctttggccatagagataggaagaacttggtggat
ccgtatttggaggtcagctttgctggaaaaaagctgtgcaccagaatcattgagaaaaat
gcaaatcctgaatggaatcaagtcatccacctccaagtcaagttcccgtccatgtgtgaa
cgcatcaagttgaccatgtttgactgggatcgattcagcaaggacgacgccatcggaaca
acgtacttgaacctcgtcaagatctcctccgctggcagagagcttgaagcaatcactgca
acaagcgagtctggtttcctgccaacatttggaccttgttatgtcaacttgtatggcagc
ccaagggagtttacggatctccctgacccgtacgaggaacttaaccttggcaagggcgaa
ggtgtcgcctacaaaggtaggctccttgtcgagctatccactctgctggacggaaaggtg
gataagaacatagacgatatttccaatgatgacatcctggtggcacagaaataccagcgt
aagaggaagttctccctctgcgccgtgttccacagtgcctgcatgcttcaagagccgggc
gagcccatccagttcgaggtcagcatgggaaactacggcaacaagctggactccacctgc
aagcctctggcatccaccacccagtacggctttgctgtgtttgacggtaaccactattac
tacttgccctgggcggacacaaaacccgtggtaacgctgacttcctcctgggaagatatc
ggccaccgtttggacgccgtcaacattcttctctctattgcggaaagactcgagcacaac
ctgtcttctttgaaaagggccatccagtccaaggtggctgaggaccaactggttgaaatt
cggctaaaactcatcagtcatttgcttgaggacttgaacagtttccagcttccagaggtg
gaaagccagccccacgtgaccacgctggatctccagataaaaaacatgcgtgacgcgacg
ctggagagcctccaacaggcggctaattgcatgagagaggaggccacggatgtcaaggca
actgtcagtgacatcgaagactggctggacagaatcaaacagctggcagatgagcctcag
aatagcatgcccgacgtgatcatctggatgttgagaggagagaagcgcgtcgcttttgcc
cgtgtcccggctcaccgcattctctactccaacttcagcgaacaagcttgtggcaaacac
tgcggacgcatgcagaccatcttcatgcagtacccgatggataaaaaaaaaggcgtcaaa
attcccgttcagctgcgggtcaacatgtggctcggtctctccgcgttggagaagaagttc
aacagcttctctgagggaaacttcagtgtatatgcagaaatgtatgaaaaccaggcccac
ttttttgggaaatggggaaccaagggtctggtgggtcgccacaactcctcagacgtgact
ggaaaagtgaaactgataaaggagcgcttcctgccaccgcgtggatgggagtgggatggc
gactggttcgttgatcctgagcgcggcctgttgacagaagccgacgcgggccacacagag
ttcaccgacgaggtttttcgaaacgaaacacgtttccccggtggagagtggaaacctgct
ggggagccttacactgatgtgaatggcgaaaaggctcagagcccctcagagatcgagtgt
cccgtcggatggacttgggaagacgactggagttttgacagcaacagagctgtcgacgag
aaaggctgggagtacggagttaccattccacctgatgacaaacccaaaacctgggtggca
gcagaaaagatgtaccacatccatcgtaggaagagactcgttagacccagaaggaagata
tcggataaaaccatcgctgatccgaggcaagaaataggcgaaggctgggagtattcttcc
ctcatcggctggaagtttcattgcaaagagcgctcgtccgacacgttccgtcgccgacgc
tggcgaaggaagatggtcccgtcggaccgcaacgggccatccgccatcttcaggctggaa
ggcgcactgggggttgacgtggacgacgagaagcccagtaaaacggatgcttccaaactg
gacgacgagaagcccagtaaaacggatgcttccaaactggacgacgagaagcccagtaaa
acggatgcttccaaactatttggtgccaacactcccaccatttcctgccactttagccgg
tcttacatttaccagctgcgagtctatgtgtaccaggcgaggaatctttgtgccatggac
aaggacagcttctcagatccgtacgcccacgtgtcattcctccatctgagcaacaccaca
gaagtcatcagtgccacgttgaaccctacctgggatcagagtctcatctttgaccatgtt
gaaatctacggagacccacaaaccatcgcccgcaacccgccagacgttgtcctggagctt
tacgaccgcgacaaagtgggtaaagatgagcccatggggtgctgtatggtcccccctgtg
gtcaaactcaacctcagtgtcgcttctggcaataaactgcaatggtaccccgttaccaag
aaaggccgcagcgctggagaagcactgctggcggctgagcttctactgaaggacaaggcg
aacgaaggagctcttcctatggctcctcctcgacgaggggacaagctctacatagttcct
gaaggagtcaggcctgttgtgcaactcactgccattgaggtcttgacttggggcttgagg
aacatgaaaagctaccagctggccccggtcgcttctcccagcttgattgtggaatgcagc
ggcgagatcattcaaacggccatcatcaagaatttcaagaagaaccccaacttccctgga
tccctcctgctactcaaagtgcttctccccaaagaagagatgtacactccccctatcatc
ctgaaggtcatcgaccacagacccttcgggaggaagccggtggtgggtcagtgcaccgtc
gactgcttggaggagttccgctgcgacccctatcgagtcaacaatcaagtctgcatgtca
gccagagtggcaatgatagcggccgctcaagatgacgttgttatcgacatcgaggagagg
ccgactgtcaaagctgagcttcaaactgagcaggaagaggaagcggtcgactggtggagt
aaattttacgcctctattggacagcaggagaagtgcgggccttacctgaagaagggatac
gacacgttacaagtgtatgattgtgagcttgagcaagtggaagagtttcagggactcact
gatttttgcaaaacttttaaactctcgcgaggaaaggcagacggaaaggacgacaatcct
tcagttgtgggagagttcaagggctcgttcaagatctacccgctacccgaaggcgttcag
gctcccccccgacaattccgagagcttcccgaaagcgggcctcaggagtgtctggtcaga
atttacgtggtgcgctgtattgacttgcagcccaaggacccaaacggcatgtgcgatccg
tacgtgaagatttccctcgggaggaaaactgtggatgacagagataactacaaaccaaac
actctcaatccagaaattgggaggatgttcgagctgtcctgctttttgccacaagacaaa
gatctgaagatcgcagtctacgactacgacttagcgagccgggatgataaagtaggcgag
accgtcatcgatttggagaatcgactgctgtcccgtttcaggtcctgctgtgggataccg
cagacctattgcgtctctgggatgaatcagtggagagaccagctgaaaccttctcagatc
ctcgagaatgtggccaagattaggggccttcctcctccacactttgagggagatggaagc
actctgtctttttcggggaaccaatacaggctggaggattttgaggaaaccattcccact
cacccccacctcggcccgcctagagagagactgccactgcatgtcctcagacagcagggt
ttggtacccgagcatgtggagaccaggaccctgtgcagctcccatcacccaaacttgtcc
caggggcggattcaaatgtgggtggacgtctttcccaaacgcctcggtctgccgggatct
ccgtttgacatcactccacggaaagccaagaagtacttcttgcgtgccattgtttggaat
acaactgaagtgactctggatgaaacaagcatcacgggagaaaacatgagcgatatctat
gtgaaaggttggatgccaggaatggaggacgacaaacagaagacagacgttcattacaga
tcactggacggcgacggcaatttcaactggaggttcatctttgctttcgactacctgccc
gccgagcagctgtgcgtggtttccagaaaagagcacttttggaatctggacaagaccgag
ttcaggatacctcccaagttgatcgtacagatatgggacaatgacaaattctccttggat
gactacttgggctcaattgaactggacttactcaatctaatctcccctgcaaagaccccg
caaaagtgcagcttgaaaatgttgcccgggatgatcggctccaactcatccaagaagtcc
gtcttcaactcactcttctcccaaaagtcggttcggggctggtggccgtgcgccattgag
cagaacgggaagaaagtccttgccgggaaagtagaaatgacactggaaatcgtggaggag
aaggagatggaagagagaccggcagggaaaggcagagaagagcccaacatgaacccaaga
ctagagccacccaaccgtcccgacacgtcgttcttctggtttataaacccttgcaagacc
atgaagttcatcatatgccgaaaattcaaatgttttttcatcttcgggatcctactggtg
ttggtcttactcttcttcgggattcttttgttttctctacctaactatgtttccatgaaa
attgtgaagcccttctccaagtga
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