Syngnathus scovelli (Gulf pipefish): 125978821
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Entry
125978821 CDS
T08785
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125978821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125978821
03036 Chromosome and associated proteins [BR:
sscv03036
]
125978821
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125978821
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
125978821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
125978821
NCBI-ProteinID:
XP_049592535
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Position
12:complement(3287388..3295729)
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AA seq
1211 aa
AA seq
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MDEHIAAMCEQLIKAVNVTMDAESSQIYRLEALKFFEEFKEKSQLCVPCALRLADKAQPA
VIRHFGLQVFEHVIKFRWNDMQQPEKIQVKDCTMQLLSNGTHSILAEETYIKDVLSRVVV
EMIKREWPQNWPNMLKEMETLSSEGEAQTELVMLILLRLAEDVITFQTLPNQRRRDIQQT
LSRNMDSIFSFLMSILHQNIEEYQKMKGSPQHEMKARAHCKVAVATLNTLAGYIDWVPLV
YITSGNCRLLESLCLLLSEPDLQLEAAECLLIAISRKGKLEERKPFMLLFDDVAINYMLS
AAQSADCSASSETQPIEMMERHYVFLKRLCQVLCALGTQLISLVGSDVKVNVPVNLSKYL
EALLAFTTHSSLFLKSSTMATWTSMFKHETLSQQPVVVEVALKFLRTAISNLLKMGFPTR
NDHPSCQYSRVDFDSDEDFRYFFSLFRAQLGENVRSASRLVPLEAFQMAATSLQYQLGNA
APLVDGRCSLFSTPLLEWDAVTVFVECVLSQMFHSLAEEKLPVDGGVELLQAVLSYNSQD
PLIMSCVISNMSALFPFVKHRLQFLPRVLCKLFEVLTFEAVQENQEVKAPRTRGVNNVRR
HSSCAIIKICRDFPQLILSYFDMFYNHVKTLFSNDARLTVLQKYALVESLVLISNEFKDF
EKQKALLDELLASMMADWTSNATKLVLSSPAMFLSFVGADQAASEQHQEEDPVGTNRGRL
GFCLSCMLAVVKRSRCPADPEAAKAAGFLVGHSPSGSPIYRNPCAPQFLAFLPNLLALIK
TLNSLFAPENRAHLSENFTKVFDLTEGEKNVVLGLSQSVLDSYDTPAFKTNLERMQFFLT
QLYDNCFQILGNAGVSLQQEFFDVDRLAEEISASVFFSLDHVPDYRLRPIIRFFLKQMVV
SCPAKYNDSLLCPLLGPLFNYVLQRLNVKWQVILQRASVNGEEEEEVVVSQESQVTEEML
EEQLVRLLTRDILDFITACCISRKYPETAVKQEEIEEEDMMMDAPQASSTAAVTNELTEL
GKSLMKDENIYMTLLSFSFTSLSWRDATYCHRTASIICWTLLRPVVGCNLLPEAVSWFFV
SVLKGLQMHGQHEVCYASLSLLAMQLYESLRGRYTDLRTVMTQIPNINIESLDMYDRGLL
EPTAQKLSEKKRKEKFKKLIAGTVGKALCQQFRKEVHIRNLPSLYKKAKPDRDLLCSDET
TGLTALFSQRE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcatatagctgccatgtgtgaacagcttattaaggctgtgaacgtgaccatg
gatgcggaatcgagtcaaatataccgtctggaggcccttaagtttttcgaggagtttaaa
gagaaaagtcaactgtgcgtcccatgcgccttacggctagccgataaagcccagcctgct
gtaatcaggcattttgggttgcaagtttttgaacatgtcatcaagttccgatggaacgat
atgcaacaaccagagaaaatccaggtcaaagactgcaccatgcaactgttgtcgaacggt
acacattcgatcctggcggaggaaacctacatcaaggatgttctctctcgtgtggtggtg
gaaatgatcaagagggaatggccgcaaaattggccgaatatgcttaaggagatggaaact
ctttcgagcgaaggggaggcccagacggagttggtgatgctgatcctgctgaggctggcg
gaggatgtgatcaccttccagacgctgcctaaccagcgccgccgagacatccagcagacg
ctctcgcgaaacatggacagcatcttcagcttcctcatgagcattctacaccaaaacatc
gaagagtaccaaaaaatgaaagggtctccacaacatgaaatgaaggccagggctcactgc
aaagtggccgtggccaccctgaacacgctggccggctacatcgactgggtgcccctggta
tacatcacatcgggcaattgtcgtctgctggagagcttatgtctgctgctgagcgagccg
gaccttcagctggaagcggccgagtgcctcctgatcgccatcagccgcaagggcaagctg
gaggaaaggaaaccgtttatgctgctctttgatgacgtcgccatcaattatatgctttct
gcagcccagtcagcagattgctcagcctcctctgaaacgcaaccaattgagatgatggag
cggcactacgtgttcctcaagaggctgtgtcaggtgctgtgtgcactgggaacccagctc
atctcactggtgggttctgatgtcaaagtgaacgttcctgtaaacctcagcaagtacttg
gaagccttgttggctttcacgacacattccagcttgtttctgaagtcgtccacgatggcg
acctggacgtccatgttcaaacacgagacgctctcccagcagcccgtcgttgtggaagtg
gccctcaagttcctcaggacggccataagcaacctcctcaagatgggtttccctaccagg
aacgaccacccgagttgtcagtattcacgtgtggactttgacagcgatgaagatttcaga
tatttctttagcttgttccgcgctcaactgggagagaacgtgaggagcgcaagtcgcctc
gttcccttggaggcttttcagatggccgcaacgtcgctgcaataccagctcggcaatgcc
gctcctctggtggacgggcgctgctcgcttttctccacgccactgctggagtgggacgcc
gtgaccgtgttcgtcgaatgcgtgttgtctcagatgtttcatagcctcgcggaggagaag
ttgcccgtggacggcggcgtcgagctgctgcaggccgtgctgagctacaactcccaagat
cctctcatcatgtcctgcgtgatcagcaacatgtcggcgctcttccccttcgtcaagcac
agactccagttcttgcctcgggtcctttgcaagctgtttgaagttcttacatttgaggct
gttcaagaaaatcaggaagtcaaggcaccacgcacccgaggtgtaaataacgtgaggagg
cactcgtcctgtgccatcatcaagatttgcagagattttccacagttgattttgtcttat
ttcgacatgttttacaaccacgtgaagacgctgttctccaacgacgccaggcttaccgtt
ctgcagaagtacgccctggtggagtctctggtgttgatcagtaatgagttcaaggatttt
gagaagcaaaaggctctcttagatgagctgctggcctccatgatggctgactggacctca
aacgctaccaagctcgtgctctcctctcccgccatgttcttatccttcgtcggagccgac
caggctgccagcgagcagcaccaagaagaggaccccgtcggtaccaacagggggaggctg
ggcttctgcttgagttgcatgttggccgtggtgaagcggtcgcgctgtcccgccgacccg
gaagccgccaaggccgcaggcttcctcgtgggacactcgccgtcaggctctcccatctac
agaaacccctgcgccccccagtttttggctttcctgcctaaccttctggctctcatcaaa
actttaaacagtttgttcgcgccggagaacagagctcacctgagtgagaacttcaccaaa
gtgttcgacctgacggaaggagagaagaacgtggttctcggtctgtctcaaagcgttctg
gattcgtacgacacgccggcgttcaaaaccaacctggagcgcatgcagttctttctcacc
cagctgtacgacaactgtttccaaatcctgggaaacgccggcgtctcactgcagcaggag
ttcttcgacgtcgacaggctggccgaagaaatctccgcgtcggttttcttctccctcgac
cacgtgcccgactatagacttcgacccatcattcgcttttttctaaaacaaatggtggtg
tcgtgtccagccaaatacaacgacagtctcctctgccccctgctcggcccgctcttcaac
tacgttctccagcgattaaacgtgaagtggcaagtcattctccagagggcttctgtcaat
ggtgaggaggaagaggaggtggtcgtgagtcaggagagtcaggtgacagaggagatgttg
gaggagcagctggtgcgtcttctcaccagggacatactggatttcatcactgcgtgctgc
atttcaaggaaatatcccgaaactgctgtcaaacaggaggaaatagaagaggaggacatg
atgatggatgctccgcaggcatcatctactgccgcggtcacgaatgagctcactgagctg
gggaaaagcctcatgaaggatgagaacatctacatgaccctgttgtccttttccttcacc
tcgctgtcatggagggacgccacgtactgccaccgcaccgcttccatcatctgctggacc
ctcctgcggccggtggtcggatgtaaccttcttcctgaggcggtctcttggttcttcgtc
agtgtcctcaaaggtctccagatgcacgggcagcacgaggtgtgctacgccagcctctct
ctgctggccatgcaactctacgaaagcctgcgtggtcgttacacagatctgaggacggtg
atgacccagatccccaatatcaatattgagtccctggacatgtacgatcgcgggctcctg
gagcccactgcgcagaagctcagcgagaagaagaggaaagaaaagttcaagaaactcatc
gctgggaccgttgggaaagctctgtgccagcagttcaggaaagaagtccacatccggaat
cttccatctctctataagaaggcgaagccagacagggatttgctgtgcagcgacgagacg
accgggctcacggcgctcttcagccaaagagaataa
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