Syngnathus scovelli (Gulf pipefish): 125978880
Help
Entry
125978880 CDS
T08785
Name
(RefSeq) PDZ domain-containing protein 7-like
KO
K21882
PDZ domain-containing protein 7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125978880
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125978880
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
USH complex and associated proteins
125978880
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
125978880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125978880
NCBI-ProteinID:
XP_068508727
LinkDB
All DBs
Position
12:complement(3350893..3357702)
Genome browser
AA seq
842 aa
AA seq
DB search
MAHSQREMTNGGGHPHVHNGGQAGGSHSYMLKRQQKQGRRRRSSSPMGRVILINAPVQGG
DESEDIHTVTVDKTLDGRLGFSVRGGSEHGLGIFVSKVDDHSSAAQAGLAVGDKLVEVNG
VSLESITMSSAVKVLTGNSRLRMVVRRVGKIPGIRYSKEKTTWVDLIHRRMVVEEGGRTP
SEASSDSALRRIVHLFTTSDDYYLGFNIRGGREFGLGIYVSKLDPGGLAEQHGIKMGDQI
LAANGVSFDDITHSNAVEVLKSHTHVMLTIREAGRYPAYKEMVAEYGWLDKLSNGSALAS
GSSQGYDSHSSVSSSPVSSLSGLSQLLFPPPIFGSNMVDVSITTENRPTAVATADTAIQT
ESSSSPSRTIGATLLLKDTVIRGEGEVGRDERGRHQGPKTKVLMALSRPRKPIRRSQSHI
TLSEEQKQKKKVEKKTHSSDDKQAKLQRSKTFLNLFFKKDRKERSPSKEKGNNGMISRAG
LKGEQASLRHVEEMSNKLLSPDEVAAVMRHCQRFLSEKILEDLVRPLLAILDRPEKILLL
RDIRTLIPPSELSRFDSMVIPFEVQAYNLLKNPAGEKDTRRPERLIGQTIDTLPSPVLRS
PRGGTPRRHLVTPVPDFRGGFLLQPVENVPRAAHAIDSMEGLTLSPSQVFTPLLDVPVDT
FTSSSSSSSSSFNGLRGSERGRSPVRRTRREASPDSTLSGRPQDFAEVSIRVSSPRRTRT
PLKDVFASPPAVTPNGHSQTPADYDISTLTISKAKPSLGISVSGGVESRIQPVIKIESVF
PGGAASMNPALKAGYELLSVDDESLQGVTHQHAVDAIRRSFSNKGKEPMVLVVKVPKETP
AH
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcccagagggagatgacaaatgggggtgggcaccctcacgtccacaatgga
ggacaagccggggggtcccacagctacatgctgaagaggcaacaaaaacaaggacgcaga
cggaggtcttcctcacccatgggccgagtcatcctcatcaacgctcctgtacagggagga
gatgagagtgaagacatccacacggtgacagtggacaagactttagatggacgtctgggt
ttcagcgtcagaggcgggtctgaacatggactggggatttttgttagtaaggtggatgat
cacagctcagcagctcaagccggcctggccgtgggggacaaacttgtggaggtgaacggc
gtaagtctggagagtatcaccatgagtagtgccgtgaaggtcctgactggaaacagccgt
ttgaggatggtagtgcgacgtgtgggaaagattcccggcatacgctactccaaggagaag
accacgtgggtggacctgattcacaggaggatggtggtggaagagggtggacgcacacct
tctgaggccagctcggacagcgccctccgcaggatagtgcatctcttcaccacgtcagat
gattactacctgggcttcaacatccgaggaggacgagagtttggattgggaatttacgtc
tcaaagttggacccgggtgggctggcggagcagcatggtatcaaaatgggggatcagatc
ctggcggccaatggggtcagctttgatgacatcacacacagcaacgccgtggaggtcctg
aagagtcacacgcatgtcatgttaacaattagggaagctggaagatatcctgcatataag
gagatggtggcggagtacggttggctggacaaactttccaatgggtcggcgttggcgtca
gggtcttcccaaggctacgactcgcactcgtccgtctcgtcgtcccccgtgagctccctc
agtggtctctcccagctcctcttccctcctcctatctttggctccaacatggtggacgtg
tccatcaccacggagaaccggcccactgccgtcgccaccgctgacacggccatacagacg
gagtcatcctcctcccccagccggacaatcggcgccacgctgctcctgaaggacaccgtc
atacgtggggagggagaggtggggcgggatgagagaggacggcaccaaggtccaaaaacc
aaggtcctcatggctctcagtaggcctcgcaagcctattagacgctcccagagtcacatc
accctgtcagaggagcagaagcagaagaaaaaagtggaaaaaaagacacacagctcagac
gacaagcaagccaaactgcagcgttccaaaactttcctcaacctctttttcaagaaagat
cgcaaagagaggagcccatccaaagaaaaagggaataatggaatgatctcccgcgcaggc
ctgaaaggagagcaggcgtccctgcggcacgtggaggagatgtccaacaagctgctcagc
ccggacgaggtggccgccgtcatgagacactgtcagcggtttctgtccgagaagattctg
gaggatttggtgcgccccctgctggccatcttggaccggcctgagaagatactgcttctc
cgtgatataaggacgctgattcccccgagcgagttaagtcgttttgacagcatggtgata
ccttttgaagtccaggcctacaatcttctcaagaatccagcaggggagaaagacactcga
cgacccgaacgattaatcggtcagacgattgacacattaccttctccagttctacgttcc
cctcgtggaggaacccctcgacgccacctcgtaacgccagtcccagactttcgtggcggc
ttccttctccagcctgtagagaacgtgccacgggccgctcacgcgattgacagcatggag
ggactgactttgtctccgtcacaggtgttcacccccctgctggacgtacccgtcgacact
ttcacctcctcttcctcttcctcctcctcgtccttcaacggccttcgaggaagcgaacga
ggaaggtcccccgtgaggaggacgaggagggaggcgagtcccgactccactttgagcggt
cgcccgcaggactttgctgaagtcagcatacgtgtttcctcgccacgacggaccaggacg
cccctgaaggatgtttttgcaagcccccccgcggtcacacctaatggacactcccaaact
ccagcagactacgacatctccactctgactatctccaaagccaaaccgtcgctaggtatt
agcgtgtctggaggcgtcgagtcgagaattcagcccgtcatcaagattgagagcgtcttc
cctggaggagccgcttcaatgaatcccgctctcaaggccggctacgaactgctgagcgtg
gatgacgagagtctgcaaggcgtaactcaccaacacgccgtcgacgccatccgccgctcg
ttcagtaacaagggcaaagagcccatggtactggtggtcaaggtcccgaaggagacgcct
gcccactaa
DBGET
integrated database retrieval system
