Syngnathus scovelli (Gulf pipefish): 125978892
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Entry
125978892 CDS
T08785
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978892
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125978892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Lpg0393_VPS9
SH2
RA_3
RA_2
RelB
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
125978892
NCBI-ProteinID:
XP_049592693
LinkDB
All DBs
Position
12:complement(614388..628306)
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AA seq
1075 aa
AA seq
DB search
MSSHNIQQPSKRERKSSFFKLIESFALEIGTLKKEMGKKPEPIEEHKTDSMHGLSEEVGG
LFLQASPCSDTATGVRDSGYDSLHRRLSVLDRLINTHCVWLQLDLSHQDAVHILQDRAPG
TFVVRKSSSLQKKVISLRMDKHSPLPVKDFVVKESQFTFSLEGSGLSFADLFRLVAFCCI
SRDVLPFTLKLPEAIASAKTSAELAQIAKLGAGFWDSEWCQKRKGSSSSSSSFFFGATAP
DRGPPPGQQALSVAAAPSRPRLETRTPSELECCQSNGALCFINPLFIKVHHPESEHCPEL
DSSDPSQTHSPEKSSDDDRPASCDSDFSDNQQSNENKAFSLGSATQAQGEKKQSAEDTTS
RSPPSRPPPPQWAPPVRQRSMPEKIAWINVPKEKAEDKERSSSLLSRLGSSLSISPSSSP
PKRLSISSPISIPRPSFPLSFASLSSSPRKAKSSLSSSLEDAQCHLALEEQTIEKALLKA
KLSQQSSGKACTQPRSSLADTMTVSQQVVVRGSAGERAGEDCQDGVSQRLSDVSLSTDSS
DSLDFFSQSSPFFLPALHDPSPPTVADFNTHLPLSLPSSHLLYCSTEDDDDDEEEEDEDE
EEPDYGVGLESDQDQDQDLTMMPPGHRTRRRPSASALVLQKALRGHLRKMSGVFSSLLTP
EKRAIRRVVELSKDKASYFGSLVQDYLSYMGEGAGTPTWQSFASGLELLQTLRQFITQMK
SYLRQSSELGLPIESLIPEDQIDHVLEKAMHKCVLKPLKAMVSAALQEFQVRSGEWQELR
DNMSLAKARQPQEMGVEDTVPPDPIAIEKIKCKFHTMCKLYSPEKKVTMLLRVCKLIYTI
MEDNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMMELLDPSLLHGEGGYYLTSAYGA
MSLIRNFQEEQAARVLSSKTRNTLHQWHQRRTTLHSAPSFDDFQNYLRVALQELASGCTA
KTLPVRPYATVEEVCQLCAIKFKVSDPASYGLFLLMEGNSQQLAADTHPQRIKAELNSRP
QAPPFHFVYRRLADRSASGPPDSSPGPDNVTLTNLSNLTPEPATPSPDLDLRLSR
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccataacatccagcagccctccaaacgggagaggaaaagcagtttttttaag
ttgattgaatcctttgctttggaaattggcactttgaaaaaagagatggggaaaaagcct
gagccaatagaagagcacaagacggattcaatgcatggactgagcgaagaagtcgggggt
ctcttcctacaagcatccccttgttctgacacggcgaccggagtcagggactcgggctac
gattccctccatcggcgactcagcgttttggacaggttaatcaatacgcattgtgtgtgg
ctccaacttgacctaagccatcaggacgccgtacacatcctacaggaccgagcgcctgga
acatttgtggtgaggaagtcttcgagcttgcagaaaaaggtcatctctttacgcatggac
aagcactctccacttcctgtcaaagactttgttgtcaaagagagccagttcactttttct
ttggaaggatccggcctgagttttgcggacctgtttcggcttgtggctttctgctgcatc
agcagggatgtgcttcccttcaccttgaagctcccagaagccatcgcttcagccaaaacc
tctgctgagcttgctcagattgcgaaacttggagcaggtttctgggacagtgaatggtgt
cagaagaggaagggttcctcctcctcctcctcctcctttttctttggagccacagctcct
gacagaggacctccacccggccagcaagcactctctgtcgcagccgccccgagccgccct
cgactggaaactcgcaccccttcggagctcgagtgttgccagtcgaatggggcgctctgc
ttcatcaacccacttttcattaaggttcatcatccagagagcgagcactgtcctgaatta
gattcctctgatccgagtcaaactcacagcccggaaaaaagcagcgacgacgacaggcct
gcaagttgtgactccgatttcagtgacaaccaacagtccaatgaaaataaggcgtttagc
cttggtagcgccacgcaagcacaaggtgaaaaaaagcaaagcgctgaagacaccacgtca
cggtctccgccgagtcgtccacccccgccacagtgggcccctcccgtccggcagcgcagt
atgcccgagaaaattgcctggatcaatgtccccaaggagaaggcggaagacaaggagcgc
agcagtagcctcttatcccgtctgggttcttcacttagtatcagcccctcgtcgtcccct
cccaaaagactcagcatcagctcccctatctccatcccgagaccttctttccccctctct
ttcgcgtctctgtcctcctcgcctcgaaaggccaaatcctccctgtcttcctccctggag
gatgcccagtgtcacctggcgctagaggagcaaactattgaaaaggcgcttctgaaggcc
aaactatctcagcagagcagcggcaaagcttgcacgcagccccgcagcagtcttgcggac
acaatgaccgtaagccaacaagtggtggtgcgcggaagcgctggagaacgagcaggagag
gactgccaggatggggttagccaacgtctcagtgacgtgagcctttccacggattcttca
gactccttggatttcttctctcagtcgtcgcctttcttccttcctgccctccatgacccg
agtccacctacggtggccgatttcaacacccacctccccctttcgctgccctcgtcccat
cttctgtattgtagcacggaggacgacgacgacgacgaggaggaggaggacgaagacgaa
gaggagcccgactacggcgtcggcctggaaagcgaccaggaccaagaccaggacctgacc
atgatgccgcccgggcacaggaccaggcggcggccgagcgccagcgctttagtcctccag
aaagcgctgcgaggtcatctgcgcaagatgagtggcgtttttagctccctgttgacacca
gagaagagagccattcgcagggtggtggaattgtccaaagacaaagcctcctacttcggc
tccctggtgcaggactacctgagctacatgggggaaggggcaggcaccccgacctggcaa
agctttgcctctggactggaactccttcaaacgctgcgtcagtttatcacacaaatgaag
agttacctgcgacaaagctccgaacttggtttgcccatagagagcctgatacctgaagac
caaatagatcacgtcttagagaaagccatgcacaagtgtgttctgaagcctctcaaagcc
atggttagtgcggcactgcaggagtttcaagtgcgcagcggggaatggcaggagctgagg
gacaacatgtctctggccaaagctcgccagccgcaggaaatgggcgtggaggacacggtg
ccgccagatcccatcgctatagagaagatcaagtgcaagtttcacaccatgtgcaagctg
tactctccggaaaagaaggtcaccatgctgctgagggtttgcaaactcatctacaccatt
atggaagacaattcaggccgtctgtacggtgcagatgacttcctgccgatgctgacctac
gtgttggcacaatgcgacatgccgcagctggacaatgagatactttacatgatggagcta
ctggatccctcgctgcttcacggagaaggtggctattatttgacgagcgcgtacggagca
atgtcattgatccgcaacttccaagaggagcaagctgccagggtgctgagctccaagacg
aggaacacgctgcaccagtggcaccagcgacgcaccactctgcactcggcgccatccttc
gatgacttccaaaattacctgcgggtggcgctgcaggagctggctagcggctgcaccgct
aagaccctcccagtccgcccctacgccaccgtggaggaagtgtgtcagctgtgcgccata
aagttcaaagtgtctgaccctgccagctatggcttgttcctgctgatggagggcaacagc
cagcagctggcagcagacacccatcctcagaggatcaaggcggagctcaacagccggccg
caagctccccccttccattttgtttaccgccgcttggccgatcgcagcgcctcgggccct
ccggactcttcgcccggtcccgacaacgtcactttgaccaacctgagcaacctcactcct
gagccagccaccccctcccctgatttggacctcagactgtcacgttaa
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