Syngnathus scovelli (Gulf pipefish): 125978898
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Entry
125978898 CDS
T08785
Symbol
ebf3b
Name
(RefSeq) transcription factor COE3 isoform X1
KO
K09103
early B-cell factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125978898 (ebf3b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125978898 (ebf3b)
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Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
125978898
NCBI-ProteinID:
XP_049592707
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All DBs
Position
12:4075737..4148905
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AA seq
582 aa
AA seq
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MFGIQETIPRGGTTMKEEPLGGLNSVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPTSEKTNNGIHYKLQLLYSNGVR
TEQDLYIRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEGTPPYLENAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ
IPSLANTASHGMMGVNSFSSQLAVNVSESQGNDQVGYSRNTSSVSPRGYISSSTPQQSSY
NTVSNSMNGYGNAGMNLGVPSSPGFLNGSSANSPYGIKQKSAFAPVVRPQASPPPSCTSA
NGNGLQGEPPSPPHPFPTDYWSDTAAQASVRFAMSGLVVPPM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagacgataccgcggggcggcacgaccatgaaggaggaaccgctc
ggcggtctcaactcggtgcgctcatggatgcacacggccggcgtcgtggacgccaacaca
gccgcgcaaagtggagtcggcctggcccgggcgcactacgagaagcagcccccgtccaac
ctcaggaagtccaatttcttccacttcgtgctcgccttgtacgacaggcaggggcagcca
gtggaaatcgagaggacggcttttgtcgactttgtggagaaggaaaaagagccaaccagt
gaaaaaaccaacaatgggatacattacaaactacagttattgtacagtaacggtgtcaga
acagaacaggatctttacattcggctaattgattccatgacgaaacaggccatagtttac
gagggccaagacaagaatccggaaatgtgcagagttcttctgacccacgaaatcatgtgc
agccgatgctgcgacaagaaaagctgcgggaacagaaacgagaccccgtcagacccggtg
atcatcgacagattcttcctaaaattcttcctcaagtgcaaccagaactgtctgaagaat
gccgggaacccacgagacatgcgcagattccaggttgtcgtatcgacgaccgtcaacgtg
gacggccacgtactggccgtctctgacaacatgttcgtacacaacaattccaagcatggg
cgaagggctcgcagactcgacccttcagaaggtacgcctccttatctggagaatgcagcc
accccgtgcatcaaggcaatcagccccagcgagggatggaccactggaggagccaccgtc
atcatcataggggacaacttcttcgacggcctacaggtggtcttcggcaccatgctcgta
tggagtgagctgataactccccacgctatccgcgtccaaacaccacctcggcacatcccc
ggcgtggtggaagtcacgctgtcctacaagtccaagcagttctgcaaaggtgcccccggg
agatttgtgtacactgccctcaacgagcccaccatcgactacggtttccagaggctgcag
aaggtcatccccagacaccccggcgaccccgaaaggttacccaaggaggtgttactgaag
cgggcggctgacctcgtcgaggccctgtacgggatgccccacaacaatcaggagatcatt
ctgaagagggcagctgacatcgccgaggccctgtacagcgttccccgcaaccacaaccag
atcccctctctcgccaacacagcctcccacggcatgatgggagttaactccttcagcagc
cagctagcagtcaacgtgtctgagtcacaagggaacgaccaagtgggttacagccggaac
accagcagcgtgtccccccggggctacatctccagcagcaccccgcaacagtcgagctac
aacaccgtcagcaacagcatgaacggctacggcaatgccggcatgaacctgggcgtgcca
agctccccggggttcctcaacggatcctctgccaactccccatatggaattaaacaaaag
agcgccttcgcccccgtggtccgaccccaggcctccccacccccctcctgcaccagcgcc
aacggcaacggactgcaaggtgagcccccctcaccccctcatcctttccctacggactac
tggtcagatactgctgctcaggcctctgtccggtttgccatgtccggcctcgtcgtccca
ccaatgtaa
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