Syngnathus scovelli (Gulf pipefish): 125978899
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Entry
125978899 CDS
T08785
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04382
Cornified envelope formation
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125978899
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125978899
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125978899
09158 Development and regeneration
04382 Cornified envelope formation
125978899
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125978899
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125978899
03036 Chromosome and associated proteins [BR:
sscv03036
]
125978899
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125978899
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125978899
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125978899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
125978899
NCBI-ProteinID:
XP_049592715
LinkDB
All DBs
Position
12:complement(4058496..4063622)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQHEQE
SKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKISERDKRAEGYNLKYEDGRLIDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHI
NSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN
VFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRRDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggttgcaggaggaaatgatttccagtggtgtttctctcaagtaaaaggagcg
atagatgaagatgttgcggaagccgacataatctccacggttgaattcaactattcggga
gagctgctcgctacgggagacaagggcggcagagtagtgatatttcaacacgagcaggag
tctaaaaatcgtcctcacctacgcggcgagtacaacgtttatagcacttttcagagtcac
gagcctgaatttgactacttgaaaagtttagaaattgaggagaaaatcaataaaattagg
tggctaccccaacagaatgctgctcactttctcctttctacaaacgataaaactatcaaa
ttgtggaaaataagtgaacgagacaagcgggcggaaggctacaacctgaaatatgaagat
ggccgacttatagacccttttagaatcacctctttacgggtaccggtgctaatgcccatg
gatctcatggtagaagccagcccgcggaggatctttgcaaatgcgcacacctatcacatt
aattccatttctgtaaatagtgaccacgaaacgtacctctctgcagatgacctaagaata
aatttatggcacttggaaatcacagacagaagttttaatattgtagacatcaagcccgct
aatatggaggagctgacggaagtcatcacagcggccgagtgccatccccaccaatgcaac
gtatttgtgtacagcagtagcaaaggcaccatccgattgtgcgacatgcgagcggcggcg
ctctgcgaccgccactcaaaattctttgaggagcccgaggatcccagcagccgctccttc
ttctccgagatcatctcgtccatctcagacgtgaagttcagtcacagcgggcgctacatg
atgacacgtgactacctctctgtcaaagtttgggacctcaacatggagaaccggccagtg
gagacgtatcaggtccatgaataccttcgcagcaaactgtgctctttgtatgaaaatgac
tgcatctttgacaagtttgagtgctgctggaatggcagtgacagtgccatcatgacgggc
tcgtacaacaacttcttccgaatgttcgaccgcaacacccggcgggacatcacgctggag
gcgtcgcgggagagcagcaaaccgcgggccacgctcaagccacgcaaggtatccacgggc
ggcaagcggaagaaggacgagatcagcgtggacagcctggacttcaacaagaagatcctg
cacacagcctggcaccccaaagagaacgtgatcgccgtggccgccaccaacaacttgtac
attttccaggacaagatcaactag
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