Syngnathus scovelli (Gulf pipefish): 125978926
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Entry
125978926 CDS
T08785
Symbol
zranb1b
Name
(RefSeq) ubiquitin thioesterase zranb1-B
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125978926 (zranb1b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125978926 (zranb1b)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125978926 (zranb1b)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C64
125978926 (zranb1b)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125978926 (zranb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
DAAF9_N
Motif
Other DBs
NCBI-GeneID:
125978926
NCBI-ProteinID:
XP_049592805
LinkDB
All DBs
Position
12:complement(4408039..4417225)
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AA seq
742 aa
AA seq
DB search
MTELVAKWACEYCTYENWQSAIKCTMCRAQRPSAGAIITEEPFKSVPPLDPVGLGNSPTQ
GSSSLLICPDSSARPRVRAPDAPEISSKWSCHMCTYLNWPRAIRCTQCLCHRQHASHQGQ
PRSPTESPQTSGSGCRPAPSSTATDPCEEYNDRNRLNTHAQHWTCAACTYENWSKAPKCV
VCDHPRPGHGPLAEPIKLASEPERQQPSSKFIDADIGNWRGGSMGSQGGQGVVGVVGLSG
GCSSSRRSPPSSKRESEVNMDFQRIEVASGAGVSSQEELQVDFKKLKQIKNRMRRTDWLF
LNACVGVVEGDLAAVEAYKTSGGDIARQLSSDEVHLLNRPSAFDVGFTLVHLAIRFQRQD
MLAVLLTEVSQQAAKCIPAMVCPELTEQIRREVAASLHQRKGDFTCYFLTDLVTFTLPAD
IEDLPPAVQEKLFDEVLDRDVQKELEEESPIINWSLELGTRLDSRLYALWNRTAGDCLLD
SVLQATWGIYDKDSVLRKTLHDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLREEQWQED
WAFILSLASQPGSSLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGFTRFQGVYLPLL
WEQSFCWKSPIALGYTRGHFSALVAMENDGFDNRGAGANLNTDDDVTVTFLPLVDNDRKL
LHIHFLSAQEMGNEEQQEKLLRSWLDCCVTEGGVLVALQKSSRRRNHPLVTQMVEKWLDG
YRQIRACAALSDGEEEEEDDDE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctggtcgccaagtgggcctgtgaatactgcacctacgagaactggcagtcg
gccatcaagtgcaccatgtgccgcgcgcagcggcccagcgcgggcgccatcatcactgag
gagcccttcaagagcgtaccaccgctggaccccgtcggcctcggcaacagccccacccag
gggagctcctctttgctcatttgtcccgactccagcgcgcggccacgcgtccgtgcgccc
gacgccccagagatcagttccaagtggtcctgtcacatgtgtacctacctgaactggcct
cgcgccatccgctgcactcagtgcctgtgtcacaggcagcacgccagtcatcaaggacag
ccacggagtccgaccgagtcgccccagacctcaggctccgggtgccgcccggcgccctcc
tccactgccacggacccctgcgaggaatacaatgaccgcaatcggctcaacacacacgcg
cagcactggacctgtgccgcctgtacttacgagaactggtcaaaggcgcccaagtgtgtc
gtgtgcgaccacccgcggcccggacacggcccgctagccgaacccatcaaactggcgtcc
gagcccgaacggcagcagccgtcctccaagtttatcgacgccgatataggaaactggcgg
ggcggcagcatggggagccaggggggacagggagtcgttggcgtggtgggtttgagcggg
ggctgcagcagcagccggaggtcgccgccatcctccaaacgcgagtcggaggtaaacatg
gactttcagaggatcgaggtggcgtcgggggccggggtcagcagtcaggaggagctgcag
gtggatttcaaaaagctcaagcagatcaagaaccgaatgaggaggacggattggctgttc
ctcaacgcctgtgtcggcgtggtggagggcgacctggcggctgtagaggcctacaagacg
tcgggcggcgacatcgccaggcagctgtcgtccgacgaggtgcacctgctcaaccgtccg
tcggcgttcgacgtaggcttcacgctggtgcacctcgccatccgcttccagaggcaggac
atgctggccgtgctgctcaccgaggtgtcccaacaggcggccaagtgcatcccggcgatg
gtgtgtcccgagctgacggagcagatccgccgcgaggtggctgcctccctccaccaacgc
aagggggacttcacctgctacttcctcacggacctggtcaccttcaccttgccagcagat
attgaggatttacccccagccgttcaggaaaagctttttgacgaggttttggaccgagat
gtgcaaaaagagctggaggaggagtctcccatcatcaactggtcgctggagctcgggacc
cgtctggacagccgtctgtacgccttgtggaaccgcacggccggcgactgcctgctggac
tcggtactgcaggccacgtggggcatctacgacaaggactcggtcctgcgcaagacgctc
cacgacagcctgcacgactgctcacactggttctacacgcgctggaaggagtgggagtcg
tggtattcgcaaagcttcggcctgcacttttctctgcgggaggaacagtggcaggaggac
tgggccttcatcctgtcactggccagtcagcccggatccagcttggagcagactcacatt
ttcgttcttgcacacatacttcggaggcccatcatcgtctacggagtgaagtactacaaa
agtttccgtggggaaacgctcgggttcactcgctttcaaggcgtgtacttgcccctgctg
tgggagcagagcttctgctggaagagccccatcgcgctgggctacacgcgcggccacttc
tccgccctggtggccatggagaacgacggcttcgacaatcgcggcgccggcgccaacctc
aacacagacgacgacgtcaccgtcaccttcttgccgctcgtcgacaacgaccgcaagctg
ctgcacatccacttcctctccgcgcaagaaatgggcaacgaggagcagcaggagaagctg
ctgcgctcgtggctggactgctgcgtgacggaaggcggcgtgctggtggccctccagaag
agctcacgccgacgcaaccacccactcgtcacgcagatggtggagaagtggctggacggc
tatcggcagatacgagcctgcgccgcgctgtccgacggcgaggaggaggaggaggacgac
gacgagtga
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