Syngnathus scovelli (Gulf pipefish): 125978950
Help
Entry
125978950 CDS
T08785
Name
(RefSeq) atlastin-2 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978950
Membrane trafficking [BR:
sscv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125978950
Autophagy
ER-phagy
ER-phagy recepters
125978950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF3040
Motif
Other DBs
NCBI-GeneID:
125978950
NCBI-ProteinID:
XP_049592829
LinkDB
All DBs
Position
12:complement(11311299..11319216)
Genome browser
AA seq
619 aa
AA seq
DB search
MAEVSGLRSRAHLEPNCKSTRAEQGSSSVQDVTVVRRSQRSALARPEDLEDDLLLGKMNS
DWTPSPDEGVQELQEEEEEKARPVQILLANEDEHSFELDSAALEKILLQEHVRDLNVVVV
SVAGAFRKGKSFLLDFMLRYMYNQQKKQWIGGDDDPLTGFTWRGGCERETTGIQVWNEVF
VVDKPDGSKVAVLLVDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHL
QLFTEYGRLALEEVYLKPFQSLMFLIRDWSFPYEYDYGLEGGNAFLTGRLQVKQNQHEEL
QNVRKHIHSCFSNIGCFLLPHPGLKVSTNLYFDGRLRDIDGDFKRQLSQLVPLLLAPEQL
VVKEIGGNKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLTAVAGAKDMYNKN
MEQVCGGDKPYIAPADLERSHDEFREHSVRYFRSVKKMGGDEFCQRYQNQLEAELNEAFG
NFCKHNDGKNIFYAARTPATLFAIMFVAYVVSGVMAFVGLSTLAALANLLMGLALLSLCA
WAYVKYSGEFREVGTIIDLVAETLWEQVLKPLSEHYMEDNVRQTVVNSLKASLTEPGGSG
GGSSSSQQQQQQNAKLKTH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgagcgggctgaggagcagagctcacttagagcccaactgtaaaagcaca
cgagctgagcaaggctcgagcagtgtccaagatgtcaccgtggttcgacgcagtcagagg
agtgctctagccagacccgaggacctggaggatgacttgcttctgggaaagatgaactcc
gactggactccttcacctgatgaaggcgttcaggaattacaggaagaggaagaggagaag
gcccggccggtgcagatcctgctggccaacgaggacgagcacagctttgagctggactcc
gccgcgttggagaagatcctgctgcaggagcacgtgcgggacctcaatgtggtggtggtg
tcggttgctggcgccttccgcaagggcaagtccttcctgctggacttcatgctgcgctac
atgtacaatcagcaaaaaaagcagtggataggcggtgacgatgacccgctgaccggtttc
acgtggagaggaggctgcgagagggagaccaccggaattcaagtctggaatgaagtcttt
gtggtggacaagccggacggcagcaaggtggccgtcctcctggtggacacgcagggagcc
ttcgacagccagtctaccattaaggactgtgccacagtgtttgccctcagcacgatgacc
agctccgtgcaggtgtacaatctctcgcaaaacattcaggaagatgacctgcagcatctt
cagctcttcacagagtacggccgcctggccttggaagaagtctacttgaaaccttttcag
tccctcatgttcctcattcgggattggagtttcccctacgagtacgactacggcctggag
ggaggcaacgctttcttgacggggcgcctgcaggtgaagcagaaccagcacgaggagctg
cagaacgtccgcaagcacatccactcgtgcttctccaacatcggctgcttcctgctgcct
cacccgggcctcaaggtgtccaccaatctctactttgatggccgactgagagacatcgac
ggggactttaagcggcagctgtcgcagctggtgccgctgctcctggcacccgaacaactg
gtggtgaaggagatcggcggcaacaaagtcacatgtcgagatcttgtggagtacttcaag
gcgtacatcaagatctatcaaggtgaagagctgcctcatccaaagtccatgttgcaggca
acggcggaagccaacaacctgactgccgtagctggagccaaagacatgtacaacaagaac
atggagcaggtgtgcggcggcgataagccatacatcgcccccgccgacctggagcgctcc
cacgacgagttccgcgagcactctgtgcgctacttccgctcggtgaagaaaatggggggt
gacgagttttgccagcgctaccagaaccagctggaggccgagctgaacgaggcctttgga
aacttctgcaagcacaacgacggcaaaaacatcttctacgcggcgcgcacgcccgccacg
ctcttcgccatcatgtttgtcgcctacgtggtgtcgggcgtaatggcctttgtgggtctg
agtacgctggcggcgctggccaatctgctgatgggcctggcgctcttgtcgctctgcgca
tgggcgtacgtcaagtactctggcgagttccgtgaggtgggaaccatcatcgacctggtg
gcagagacgctgtgggaacaggttctcaagccgctcagtgaacattacatggaagacaac
gtgcggcagacggtagtcaactcactcaaagccagcctgaccgaacctggcggcagtggc
ggcggctcgtcctcttcacagcagcagcagcagcaaaacgccaagttaaagacgcactga
DBGET
integrated database retrieval system
