Syngnathus scovelli (Gulf pipefish): 125979016
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Entry
125979016 CDS
T08785
Symbol
gabrp
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125979016 (gabrp)
04082 Neuroactive ligand signaling
125979016 (gabrp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125979016 (gabrp)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125979016 (gabrp)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125979016
NCBI-ProteinID:
XP_049592995
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Position
1:18889623..18897163
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AA seq
565 aa
AA seq
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MPQSRVAPLLPFPSTFFFILPSALSISPAFHAPFSRCCYHSVLLPSLRLLFSAVYSIHHH
YVRLTGYHQFVNLDLEILQDRGSAQLLIQNVCPAAYIADHVPDLHAQVRQLNSTICVTKS
VEIEFAFLSVVPSASMFPGHNWGEWNDSQLLPTIQKLMKGYNRYLRPNFNEGPVEIGMSL
DIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFIPDSKR
SFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQVCTLQLESWGYNLQD
VVFYWTRGNDSVKGLDTLRLAQYSVESYHTSVSEAVYETGQYPKLVLHFALRRNVLFFIL
ETYVPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAID
VYLGICFTFIFGALLEYACAHFYTMQHQTIEDLHRDLVREFNESSGNGSIPVVSSTQPKD
SVKVSAAAEEPTEQSPNSDTKATGEPKQEKKGQGCSLSSVKDASKKAVSIFIVENPHNID
RHARTVFPMAFLFVNILYWLYYLFH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtcacgagtggcaccactgttgccttttccctccacattttttttcattctt
ccttcagctctaagtatttctccagcttttcatgctcctttttccagatgttgttatcat
tcagtattgctaccttcattacgactgctgttctctgctgtttacagtatccaccaccac
tatgtcaggctgactggctatcaccagtttgtgaatctggatctggaaatcctccaagac
cgaggcagtgcacagttgctgatccaaaatgtttgtccagctgcctacattgctgaccat
gtgcctgaccttcacgctcaggtgagacagcttaactccacaatttgtgtcacaaagagt
gttgaaattgaatttgcatttctctctgtggtccccagtgctagtatgttccccggccat
aactggggggaatggaacgactctcagctcctgccaaccattcagaagctaatgaaagga
tacaaccgctaccttagacccaatttcaatgagggccctgtggaaattgggatgagtctt
gacattgcaagcatcgatgccatctctgaaatcaatatggactacactgcaactatcttc
ctgcgccaacggtggcgagattccagattggtgttcccagggaacgagagtgtcagtgtg
gatggacgcctggtgtcacttctttggatccccgacacctttattcctgactcaaagcgt
tctttcctacatgatgtgacggtggaaaaccgcctcatacgcatattcagcaacgggacc
gtactctatgcactacgcatcacagctaccatcgcctgcaacatggacctgactaaatac
cccatggacagacaggtgtgcaccctgcagctagaaagctggggctacaatctgcaggat
gtagtgttttactggaccagagggaatgattcagtgaagggtctggacacactgcggctg
gctcagtatagcgtggagagctaccacacatctgtgtcagaggctgtgtacgagactgga
caataccccaagctggtgctgcattttgcattgcgcagaaatgttttgttcttcatcttg
gaaacatatgttccctccaccctcttggtggttctctcctgggtctcattctggatcagc
cagtcctctgtaccagccaggacctgcattggtgttactacagtcctgacaatgacgact
ctgatgatgggggctcgcacctccctaccaaatgccaactgcttcattaaggccatagac
gtctacctgggcatttgctttaccttcatatttggtgctctgttggagtatgcctgtgct
cacttctataccatgcaacaccaaaccatagaggacttacacagggatcttgtgagagag
ttcaacgagtccagcggaaatggctccatccccgtcgtcagctccacccaaccgaaggat
tctgtgaaagtaagcgccgccgccgaggagcctacagaacaatcgcccaacagtgacaca
aaggccaccggtgaacccaagcaggaaaaaaaaggtcaaggctgcagcctgtcatcagtg
aaggatgcttcaaagaaggcagtatccatctttattgtggaaaatccacacaacatcgat
cgccatgcccgcaccgttttccccatggcattcctttttgtcaatattctctactggctt
tattatctctttcactga
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