Syngnathus scovelli (Gulf pipefish): 125979254
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Entry
125979254 CDS
T08785
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125979254 (erbin)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
125979254
NCBI-ProteinID:
XP_049593219
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All DBs
Position
13:10599694..10616143
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AA seq
1350 aa
AA seq
DB search
MSKRSFFVRLVPCRCLRGEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELFLDANQIEDL
PKQLFNCQLLQRLSMPDNDVTVLPPGVANLVNLRELDVSKNSIQEFPENIKNCKVLTIVE
ASVNPISKLPDGFTQLMSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQ
KLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGTLKQLLYLDVSKNN
LEMVDEQICACESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMELPDSIGGLSSL
DELDCSFNEIEALPPSIGQCAAMRTFAADHNFLSQLPPEMGNWKNATVLFLHSNKLESLP
EEMGDMHKLKVINLSNNKLKNLPYSFTKLSQMTAMWLSENQSKPLIPLQKEEDPETHKTV
LTNYMFPQQTRTEDYVPNSDSESFNPVLWEEQRKHRAQVAFECDEDKDERETPPREGNLK
RYPTPYPDELKNMVKTAQSVAHRLKEDESSEESGRDPKTPAERNHIGVQDVGVKVIDAPR
SNGLASDLEAKACNTTFTIPNIPEGISRDTESESFSSQQAPLKSSESSTINHEDTLEDSE
ELSDEEEEMRIAEMRPPLIEISINQPKVVTLSKDKKDDSKDADSLLDDTVANSNQNNSNC
SSPSRMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRHEDENMNPSKDAGELLHNGNGS
ETSLQALLRAQRGATEPAGDYDLSMEARLAFIEKGLNNGLGDGYTKWDQINMNVSHPATD
NMGEPRNGLVGLQESDGKRGFDNRHFQNGNQQVSDGSSGGGQMSHSTEELSPERRCQPPQ
VSKSQSISNIDAGGMKMYSFDGDAAAENRMASGSGPDPTSTAQGQSIVRSKSASLLDDHN
LQVSPSTEQLSSSIPPTSTSRYPVPSSGPTGASPPQYNVQYSSKDGMWAQRMPMPPEHQG
YLPPATHSLANTNYSNRNQAPPYPLQPQQRAPPMGSKPPGDMWTKERLHSTSNQSRGGTL
QRQSSATSTSSMGDYLTYRDIHTLARGPLAMSQAAQRPISNRTYSIDIAAPTRPPGARPQ
PHELPERTMSVSDFHYPHSSPSKRPNVRVKSEHSLLDGSGGLVSGAPGRVPADWRDQVMR
HIEAKKMEKNALSRSFNSYNAPLGCAPHRDCYYGSCRDVFGPYAAAAFSDDVFGPPGQQS
YTMDSRRKVPLMNGQAVSSARTHGSQTSMARHPSREQLIDYLMLKVSHQAPGPLRQPHEI
HVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEGPASKILQPGDKILQANGYS
FVNIDHGNAVSLLKTFPSTVDLTIVRDVQA
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgcagcttcttcgttcgcctagtgccgtgccgctgcttgcggggcgaggag
gaggcggtgacatcactggactactcccactgcagcctggaaacagtacccaaggagatc
ttcagctttgagaagacgctgcaggagctctttctcgatgccaaccagattgaagatcta
cccaaacaactattcaactgtcagctgctccagcgactgagcatgcccgacaatgacgtc
acggtgttgccgccaggcgtcgccaacctcgtcaacctcagggagcttgacgtcagcaaa
aacagtatccaggagtttccagagaatatcaagaactgcaaagtgctcactatcgtggaa
gccagcgtcaatcccatttccaagctccctgatggcttcacccagctcatgagcctgagc
cagctctacctgaacgacgctttcctggagttcctaccagctagttttggcaggctgaca
aagctgcagattctggagctgagagagaaccagctgaagatgttgcccaagagcatgcag
aagctcacacagctggaaaggttggacctgggcagcaacgagttcactgaagtgcctgag
gtattggagcagctgactggaatcaaggagctctggatggacgggaaccgtctgacgttt
ttgcctgggatgctgggcacgctcaagcaactgctctacttggacgtttccaagaacaac
ctggagatggtggacgagcagatctgcgcctgcgagagtctgcaggacctcctgctgtcc
aacaacgccctcacccaactgccaggctctatcggctcgctgaagaaactgacggctttg
aaggtggatgagaaccaactgatggagcttcccgactccatcggagggctgagctctctg
gacgagctggactgcagcttcaacgagatcgaagccttgccgccgtccatcggccagtgc
gcggccatgcgcaccttcgccgccgatcacaacttcctcagccagcttccccccgagatg
ggcaactggaagaacgccaccgtgctgttcctgcactccaacaagctggagtcgctcccg
gaggagatgggcgacatgcacaagctgaaggtcatcaatctgagcaacaacaagttgaag
aacctcccctacagtttcacgaagctcagccaaatgacagccatgtggctctctgaaaac
cagtccaaacccctgatcccgcttcagaaggaagaagaccccgagacccacaaaaccgta
ctgaccaactacatgttcccgcagcagacccgaaccgaagactacgtccccaactccgac
tcggaaagcttcaatccggtcttgtgggaggaacagcgtaagcatcgagctcaggtggcc
ttcgagtgcgacgaggacaaagacgagagggaaactcctccgagggagggcaacctgaag
cgttaccccacgccgtatcccgacgaactgaagaacatggtgaagacggctcagtcggtg
gcgcaccggctcaaggaggatgagtcgagcgaagagtcgggtagagaccccaagaccccc
gcggaaaggaaccacattggtgtgcaggacgtgggagtcaaggtgatcgacgctccccgc
tctaatggccttgcatcagacttggaggccaaagcttgcaacaccaccttcaccatccca
aacattccagaaggcatatctagggacacagagtccgagtccttcagctcccaacaggcc
ccgctcaaatcgtccgagagttccaccataaaccacgaagacacgctggaggactctgag
gagctgtcggacgaagaggaggagatgaggattgccgagatgaggcctcctctcatcgag
atctccattaaccagcccaaagtggtgacactgagtaaagacaaaaaagatgacagcaag
gacgctgactcgttgctcgatgacacggtggccaacagcaaccagaacaacagcaactgc
tcgtcgccgtcacgcatgtcggactccgtgtcgctgaccaccgacagcagccaggacaac
tccctgtgcacccctgagagagaagccaagatgcccttcctccccaagagcaggcacgag
gatgagaacatgaacccctccaaagacgccggggagcttctccacaacggcaacggctcg
gaaacgtccctccaagcgctcctgagggcgcagcggggagccacggagccggcgggtgac
tacgacctgtctatggaagcccgactggccttcattgagaagggactcaacaatggcctt
ggagacggctacaccaagtgggaccagatcaacatgaacgtttcgcacccggcgacagac
aacatgggggagcctcgtaatggtttagtgggattgcaggaatcggacggcaagcggggt
ttcgacaaccgccatttccagaatggaaaccagcaagttagcgacgggtcctcgggcggc
ggccagatgtctcacagcactgaggaactgtcccctgagaggaggtgccaacctccccag
gtcagcaagtctcagagcatcagcaacatcgatgcgggcggcatgaaaatgtactcgttt
gacggcgacgcggcagcagagaataggatggcgagcggcagcggccccgatccaacgtcc
acggctcagggccagagtatagtgaggagcaagtccgcctccttgctggacgatcacaac
ctccaagtctctccaagcacggagcagttatcttcgtccatacctcccaccagcaccagc
aggtacccggtgccctccagcgggcccacaggagcctccccgcctcagtacaacgtccag
tactcaagcaaagacggcatgtgggcccagaggatgcccatgcccccagaacaccaaggc
tacctcccccccgccacccattcgctcgccaacaccaactactctaaccgcaatcaggca
ccgccgtacccgctgcagccccagcaaagggcgccccccatggggtccaaacctccaggg
gacatgtggaccaaggagagactccactctaccagcaaccagtccaggggaggcactcta
cagcggcagagcagcgccacctccacctcctccatgggcgactacctgacctaccgggac
attcacaccctcgccaggggcccgctggccatgagccaggcggcacagcggcccatctcc
aaccgcacgtacagcatcgacattgccgctccaaccaggccgcccggcgctcggccgcag
ccccacgagctcccagagaggaccatgtcggtcagcgacttccattaccctcacagtagc
cccagtaagagaccgaacgtcagggtcaagtcggagcattcgctcctggacggatccggt
ggacttgtatcgggggcgccaggaagagtcccggccgactggagggaccaggtgatgcgg
cacattgaggctaagaagatggaaaagaacgcgctgtcccgctcctttaattcttataac
gcgccacttggctgcgcgccccaccgcgactgctactacggcagctgtagggacgtgttc
gggccctacgccgccgccgccttcagcgatgacgtctttggtccacccgggcagcagagc
tacacaatggattcgcgcagaaaagtgcctctgatgaacggtcaggcggtctcgtctgct
cgtacccatgggagtcagacctccatggcccgccacccctccagagagcagctcatcgat
tacttgatgctcaaagtctcccaccaggctccggggcccttgcggcagccgcatgagatc
cacgtgaaggtggagaaaaatccagaacttgggttcagtatatccggaggagtgggaggt
cgcggaaacccctttcgtccagatgacaatgggatctttgtaacgagagtccagcctgaa
ggaccagcgtctaagattcttcagcccggtgataaaattctccaagcgaacggctacagc
tttgtgaatatcgaccatgggaacgcagtgtccctcctcaagaccttccccagcactgtg
gatctgacaatcgtgagagatgtgcaagcgtaa
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