Syngnathus scovelli (Gulf pipefish): 125979262 Help Entry 125979262         CDS       T08785                                  Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125979262  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125979262  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sscv00536]     125979262 Glycosaminoglycan binding proteins [BR:sscv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125979262 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_Tenascin EGF_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd FN3_Tor_3rd DUF4998 hEGF EGF PT Fn3_VIN3 Motif Other DBs NCBI-GeneID:  125979262 NCBI-ProteinID:  XP_049593237 LinkDB All DBs Position 13:complement(13924485..13941763) Genome browser AA seq 2085 aa AA seqDB search MAPRVHMFCLLVSALLGFSSAGLVTKILRHRRHLPQENNITSSGADRQPVVFNHVYNINV PAGHLCSVDLDATESTAPTETAVTSGRYHPADRESQIVFTHRINIPRGACGCAADLPRVQ DLLSRIEMLESEVSALRSRCGGGASVCCEAQAARNARSGPLCGGHGNYSAETCRCTCEPG WKGSNCTDMECPENCEDHGHCEDGKCVCDEPWTGSDCSELLCLNDCLARGLCVNGSCRCE PGFSGEACGQLSCPADCHGNGICVDGRCACAAGYGGDDCSRFACLNDCNNRGACFNGMCI CDAAYRGDDCALLACPDDCNGRGQCVDGRCACDLGFRGDNCGDLSCPSDCLQRGRCVNGQ CVCDEGFSGEDCGVRTCPANCYGRGDCVEGRCKCHAGFTGDDCALLSCPRNCRNRGRCLD GQCVCDEGFAGDDCGRKACPNDCLARGHCRDGVCVCHDGYSGRDCSRVTCPEKCNGRGRC VKGKCQCESGYEGVSCAERSCLNGCHNRGLCVQGQCICDEGYIREDCSEVSPPKNLTVGE VASETVDLSWINDMLVTQYLVTYVPTQPGGLLLDLTVPGDKSTATLKELEPGLEYSIKVY AILSNERSVPVSANVATALPKPEALRFKSVNETSIELVWEQLNFPFDGWEIHFRNMKEEN GKVVSTVPSSQNRFLQSGLGPGQDYEVSISVIKNNTRGPPTIQRVTTNIDAPQRLQVLDV SDSSALIGWSEPAAPTDRVTLLYKPSRASSEGAEVEIFPPDKQHSLEGLKPDTEYTVSLV AHSKNVSSEPATVTFTTALDAPRELLAVLQTENSITLTWRNNQADVDNYRVKYSPLSGAA HSEEMFPRGPGLSTTATITGLKPGTEYGIGVTSVKNERESLPTTINAATDLDPPQGLEQA ESTETSIRIRWKKPHAKVSRYRLVYVSRDGQVEEAEIPASETTFVLRDLTPATSYTVTLT AERGHRMSSPVTLVASTAEAASPSASPSAGPSARPSAGPSASPSARPSVSPSVSPSVGTS VGTSVGPSVSPSVGPSARPSVANLTFSDITWDGFTASWSPLGGDFDSFVVEVTNLDDMAQ SQNLSVSGGALSLGLWGLNANTTYMVVLYPLYRDTFLEPVYGQATTASQPSLGEINVSNV TSESFSVVWNHTEGPLDGFVLEIIDSDWLMKPREYNLSRFATTHQVSGLRPASDYVTFLY GTYKGARTSAVSVVATTAEEPDLSQLVVANVTSDRVSLTWRAAAKTFDNFVVEVRESALP SQAMGQVLPGHARSTLMAGLKARTHYNIKLYASTGGSNTPPLFAEATTEDAPVLGPVSAL SSGPHNLSVSWTIASGHFDGFVVRVGDAEQESEAREFSLPGHAANLTVSDLMDATSYNVE VYGFSHGRRTPSTLVHAVTAPLPKVENLTISNVTPFGFRASWSVKQRQPREDSAWSSSGA FSHFNLVVTDSGWLLEPQEFKVPGNQSHLDIGGLITGIGYEVRLTGVSKAGLLSRPLTAL ALTEAEPEVEHLFVSDITADSFRVSWAADEDLFDRFVIKLRDSKRLSRPQEHIVHGAERT RLITGLMAGTEYEIELYGLSLDHRSQPIIGVAQTGLTTLKGLRFSDVTDSSAVVHWSTPQ SAVDNYHITYAPFEGGSPMSITVDGGVLQALLPNMSPGRMYQVTISAVKGLEESEPSGDV VTTALDRPQSLTALNITDSSARLRWQPPVAAVDEYVITYNSESVAPIVERVSGTELQIGS LRPGTLYSVELFATREAQMSASVLTQFTTKVDPPRDLVAVNIQTDSATLTWRPPLTAISG YSLTFSAADGTTREVMLSSTASSYNMAQLARSTEYTVHLQAIATAGRSQHGTTVFSTVGH LHNYPKDCAELFQNGENTSGVYAIYVAGVESQLIQVYCDMETDGGGWLVFLRRQNGRLEF FRNWKNYTAGFGNMNDEFWLGLGNLHKITSAGQYVLRVDLRDAGDTAYAQYDKFSIAEPR TRYKLYIGTYSGTAGDSMTYHQGRPFSTLDNDNDIAVTNCALSYKGAFWYKNCHRVNLMG KYGDKSHSKGVNWFHWKGHETSIEFAEMKLRPANFGNPESRRKRS NT seq 6258 nt NT seq  +upstreamnt  +downstreamnt atggccccaagagttcacatgttctgcctcctcgtgagcgccttgctcggcttctcatcc gccggcctcgtgacaaaaatactccggcatcgccgccacttgcctcaggagaacaacatc acctcatctggtgcggaccgccagccggtggtctttaaccatgtttacaacatcaacgtc cccgctggccacttgtgctctgtcgacctggacgccacggagagcacggcgcctacggaa acggccgtcacctccggccgctaccatcccgccgacagggagagccagatcgtcttcacc caccgcatcaacatacctcgcggggcctgcggctgcgccgccgacctgccgcgagtccaa gacctgctgagccgcatcgagatgctggagagcgaagtgtcggcgttgaggagccggtgc gggggtggcgcgagcgtctgctgcgaagcccaggcagcaaggaacgcgaggagcggtccg ctgtgcggtggccacggaaactacagcgccgagacgtgccgatgcacgtgcgagcccggc tggaagggcagcaactgcaccgacatggagtgccctgaaaactgcgaagaccacggccat tgcgaggacggcaagtgtgtctgcgacgagccctggaccggttccgactgctccgagctg ctctgcctcaacgattgcctggctcgcgggctgtgcgtcaacggaagctgccgctgcgag cccggattttccggcgaggcctgcggacagctcagctgtcccgccgactgccacggtaac ggcatctgcgtggatggccggtgcgcatgcgcggcgggttacggcggcgacgactgctcc cgcttcgcttgcctcaatgactgcaacaatcgcggcgcttgcttcaacgggatgtgcatc tgcgacgccgcctaccgaggcgacgactgcgccctcttggcgtgtcccgacgactgcaac ggccgaggccagtgcgtcgacgggcgctgcgcctgcgaccttggcttccgaggagacaac tgcggcgacctttcctgtcccagcgattgcctgcagaggggtcgctgcgtcaacgggcag tgcgtgtgcgacgaaggcttcagcggcgaggactgcggcgtcaggacctgcccggccaac tgctacggtcgcggggactgcgtggagggccgctgcaagtgccacgccggcttcaccggt gacgactgcgccctgctgagctgcccccgcaactgtcgcaatcgcgggcgctgcctcgac ggacagtgcgtgtgcgatgaaggctttgccggcgacgactgcggtcgtaaggcctgcccc aacgactgcctggctcgaggccactgccgcgacggcgtgtgcgtctgtcacgacggctac tcgggccgcgactgctcccgggtcacctgtccggagaagtgcaacggcagggggcgctgc gtcaagggaaagtgccagtgtgaaagcgggtacgaaggggtaagctgtgcagagaggagc tgcctcaacggctgccacaacagaggactctgtgtccagggtcagtgcatctgcgacgaa ggctacatccgagaagactgctctgaagtgtcgcctcctaagaatctcaccgtgggtgaa gtcgcctcggagacggtggacttatcctggatcaacgacatgctggtgacgcaatacctg gtcacgtatgtgcccacccaacccggcgggctccttttggacttgaccgtgcccggggac aaaagcacggccacgctcaaagagctggagccgggtttggagtacagcatcaaggtctac gccattctgagcaacgagaggagtgtgccggttagcgccaacgtagccacagctcttcca aaaccagaagctttgagattcaagtctgtgaacgagacctccatcgagctggtgtgggag cagctcaactttcccttcgatggctgggagatccacttccgcaacatgaaagaagaaaat ggaaaggtggtgagcacagttccctcatctcaaaaccgcttcctccagtctggcctgggg ccgggtcaggactacgaggtgtccatcagtgttataaagaacaacaccaggggaccaccg acgatccaacgagtcacaaccaacatcgacgccccgcagcggctccaagtgttggacgtg agcgactcctcggcgctgatcggctggtctgagcccgcggcgccgacggaccgggtgacg ctgctttacaagcccagccgagcctcctccgagggcgccgaagtggagatcttcccgccg gacaagcagcacagcctggaaggcctgaagcccgacaccgagtacacggtgtcgctggtg gcccacagcaagaacgtcagcagtgagccggccaccgtcacctttaccacagctctggac gccccccgggagttgctggccgtgctgcagacagaaaacagcataaccctgacgtggcgc aacaatcaggccgacgtggacaactatcgtgtgaaatacagcccgctgtctggcgctgcc cacagcgaggaaatgttcccgcgaggaccgggactaagcaccacggccacaattacgggg ctaaagccagggaccgaatacgggattggcgtgaccagtgtgaagaatgagcgggaaagc ctcccaaccaccataaacgcagcgacagatctggaccctccccaaggtctggagcaagcc gagtctacggagacgtccatccgcataagatggaagaagccgcacgccaaggtgtcccga taccggctggtgtacgtctccagagacggacaagtggaggaggcggagatccccgcctcg gagacgaccttcgtcttgcgcgacctgacgccggcaacgagttacaccgtcaccttaacg gccgaacgaggccacaggatgagctcgccggtcactctggtggcatccacagcagaggca gccagcccctcagcgagcccctcagcgggcccctcagcgaggccctcagcggggccctca gcgagcccctcagcgaggccctcagtgagcccctcagtgagcccctcagtggggacctca gtggggacctcagtggggccctcagtgagcccctcagtggggccctcagcgaggccctcc gtggccaacctcaccttctccgacataacctgggacggcttcacggcttcctggagcccc ttgggcggcgacttcgacagctttgtggtggaggtaacaaacttggacgatatggcgcag agccagaacctgagtgtgtcgggcggcgcgctcagcctgggcctgtggggcttgaacgct aacaccacctacatggtggtcctgtaccccctctaccgggacacctttctggagcccgtg tacggccaagccaccacagcgtctcagccgtcgctcggcgaaattaacgtgtccaacgtg acgtccgagagcttctcggtggtctggaaccacaccgagggccccttggacgggtttgtc ctggagattattgactctgattggctgatgaagccgagggagtacaacctgtcccgcttc gcaacgacacatcaggtgtcggggctgcggcccgcctcggactatgtaaccttcctctac gggacgtacaaaggagcccgaacgagcgctgtcagtgtcgttgcgaccacagcggaagag ccagatttgtcccagctagttgtcgctaacgttacctcagaccgagtgtctctgacgtgg cgggcggctgccaagacgtttgataactttgtcgtagaagtcagagagtctgctttgccc tcgcaggccatgggtcaggttctgccgggccacgcgcgctccacgctcatggccggcctt aaagcccgtacacactacaatataaagctgtacgccagcaccggcggcagcaacacgccg ccgctattcgctgaggccacgacagaggacgcccccgtgttggggccggtgagcgcgcta tctagcggtccgcataacctcagcgtgagctggactatcgcgtccggccactttgacggc tttgttgtccgtgtcggtgacgccgagcaagagtctgaggcgcgagagttcagtttgccc ggccacgccgcaaaccttaccgtctctgacctgatggacgccacgagctataacgtggaa gtttacggcttttcccacggccgccgcactccctccacgcttgtccacgccgtcacagca cctttacccaaagtggaaaacctgaccatttccaacgtcacccccttcggcttccgtgcg tcgtggagcgtgaagcagcggcagccgcgggaagactcggcgtggtcctcctccggggct ttcagccactttaacctagtggtgaccgactcgggatggcttttggagcctcaggagttc aaggttccaggaaaccagagccacctggacatcggggggctcatcaccgggataggctat gaggtcaggctgacgggcgtgtcaaaggcggggctcctctctcggcccctcaccgcgctt gccctcacagaggcagaacccgaggtggagcacctctttgtctccgacatcacggccgac agtttccgcgtgtcgtgggcggcggacgaagacctctttgacagatttgtcatcaaacta cgggacagcaaaagattgtcccgtcctcaggagcacattgtccacggtgctgagcggacc aggctaatcactggactcatggcaggcacagagtacgaaattgaactttacggcctttct ttggaccaccgctcccaaccgatcattggggttgctcagacaggcctgactactctaaag ggccttcgtttctccgacgtgaccgactcgtcagccgtggtccactggtccacgcctcag tccgcagtcgacaattatcatatcacctacgcgccatttgaaggaggaagcccgatgagc ataaccgtggacggcggcgtgctgcaggctctgctgcccaacatgagtcccggcaggatg taccaggtgaccatcagcgcggtgaagggcctggaggagagcgagccgagcggcgacgtc gtaaccaccgctttggaccgacctcaaagtctgacggcgcttaacatcacagacagctcg gcccggttgcgatggcaaccccccgtggctgcggtggacgaatacgtgataacgtacaat tccgagtcagtggccccgatcgtggagcgtgtttctggaaccgagttgcagataggctcg ctgcgtccaggcactctctactcagtggaactcttcgccaccagggaggcgcagatgagc gcgtctgtgctgacacaattcaccaccaaggtggacccccctcgagatctggtggccgtc aacattcaaacggacagcgccactctgacatggagacccccgctaaccgccattagcggt tactcgctcaccttctccgcagcagatggcaccacccgggaagtcatgctgagttccacc gcctcttcgtacaacatggcccagctggccaggtccacagagtacacggtacacctgcaa gccatcgccacagctgggcggagccaacacgggaccacagtctttagcacagtgggccat ctgcacaattaccccaaagactgcgctgagctcttccagaacggggaaaacacgtctggc gtgtatgccatctacgtggccggcgtcgagagccagctcatccaggtctattgcgacatg gagacggatggcggcggatggctggtcttcttgagacggcaaaatggaaggctcgagttc ttcaggaactggaagaactataccgctggttttgggaacatgaacgacgagttctggctg ggtctgggcaaccttcacaagatcacctccgctggccagtacgtgctgcgcgtggacctg agggacgctggagacacagcctacgctcaatatgacaagttctccattgcagagcccaga acacgctataaactttacatcggcacctacagtgggacagcaggtgactccatgacttac caccagggccgtcctttctccactttggacaacgacaatgacatcgccgtcaccaactgc gctttgtcctacaagggagccttctggtacaaaaactgccatcgtgtcaacctgatggga aaatatggagacaaaagtcacagtaagggcgtcaactggttccactggaagggccacgag acctccatcgagtttgctgagatgaaactccgaccggccaactttgggaatcctgagagc aggaggaaaagatcgtag

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