Syngnathus scovelli (Gulf pipefish): 125979369
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Entry
125979369 CDS
T08785
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125979369 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125979369 (ap3b1a)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
AP-3 complex
125979369 (ap3b1a)
Endosome - Golgi transport
125979369 (ap3b1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
125979369
NCBI-ProteinID:
XP_049593466
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All DBs
Position
13:complement(14996369..15011125)
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AA seq
1184 aa
AA seq
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MHRFRRQSRGGHVAVGNTFFSLLGFAKRTGRCLGEGVAEPPEEIRRSGGRFFPIDLQQKK
DTVRAALVICFAELLAMDARLLSFRSEAAVAVRSAAVSAEHLQLSLKADLSQEERTLTLS
ANKSPADRNEDLKEMLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELK
KLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVSIIVPIMMLAI
KEAAADLSPYVRKTSAHAIQKLYSLDPEQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVC
PDRIDLIHKNYRKLCNLLVDVEEWGQVVIISMLTRYARTQFASPWREGAVFAENDDKTFY
DSDPEGKEEEAEAKAYAMDPDHRLLLRNTKPLLQSRNTAVVMAVAQLYWHLAPKQEVSVV
TKSLVRLLRSHREVQYVVLQNIATMSIQRKGMFEPFMKSFYVRSTDNTHIKTLKLEILTN
LANEANISTILREFQTYVKSQDKAFAAATIQAIGRCATNISEVTDTCLNGLVLLLSNRDE
GVVAESVVVIRKLLLTQPTQHGEIIKHMAKLFDKITVPMARASILWLMGEYCERVPKIAP
DVLRKIAKSFTAEEDIVKLQAVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTR
FIRQLIVPGDKSGALNKYARRILLAPKPAPVLQSAFKDRDRFQLGTLSHSLNSKAAGYQE
LSDWPAVAPDQSVRNVEVLEPVNEWAPPVGKAKPPKSDDKFYSDEDEQDEASESSGGGGS
GSSSSSNSSSGSSEASESDSDKEDESSDQSDKSSADSGKSSGESEKSSDGSERRKKTAAK
KKTGKAQVEKCHTADSDSEQTSGSSTRSSSSESGSDSDEPSAAKQQMNEVESKAKVQKTA
EKEVSLLDLDDFFPAPANASESSGLSSNVLADLEGLSLSAVSSTTTTPVTSPSFVPVQSY
DLLHHMSGKGLSAKYHFPRRPCLYGSGMVAVQVTLSNCCERPLEEIHVGERGPAGLHIHP
FNTIERLDPEASVTVSMGIDFNDSTQAANFQLCTKEERFAVFIQPAVGELLTPCGLSETD
FCKEQSQLRGMNETSATIAVATNDMSGQAVARRVASVANVGAVASSESHLHRFAARTVSS
GVLVLVLLDLKEEPGGGAKLTVNTEKSVMASMLLRDLKRALSQA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgattcaggaggcaaagtcgaggaggtcacgtggccgtcggcaatacgttcttc
tcgttgctcgggtttgccaaacggaccgggaggtgtctgggcgaaggagtagcggagcct
ccagaggagataagacgtagcggcggccgatttttcccgatagacctgcagcagaagaag
gacacggtgcgagcggctcttgtgatttgttttgccgagcttctcgccatggacgcgcgt
ttgttgagcttccgctcggaggcggccgtggccgtcaggtcggccgccgtgtcggccgag
cacctgcagctctccttgaaggccgatctgagccaggaagaacgcaccctgacgctctcc
gccaacaagtcgcccgctgacaggaacgaagacctcaaagaaatgctggagagcaacaag
gagtcgctcaaactggaggccatgaagcgggtcgtcgggctgatcgccaaaggaaaaaac
gcctcggagctgtttcccgccgtggtgaagaacgtggccagtaagaacatcgagctgaag
aagctggtgtacgtgtacttggtgagatacgccgaggagcagcaggacctggccttgctt
tccatcagcaccttccagcgggccctcaaggacccaaaccagctgattcgagccagcgcg
ctgagggtcctgtccagcatccgcgtctccatcatcgtccccatcatgatgttggccatc
aaggaggcggcggccgacctgtcgccttacgtcaggaagacatctgcccacgccatccag
aagctttacagcctggatcccgagcagaaggagcacctgatcgaagtgatcgagaagctc
ctgaaggacaagagcacgctggtggcgggcagcgtggtgatggctttcgaggaggtgtgc
ccggatcgcatcgacctgatccacaagaactaccgcaagctgtgcaacctgctggtggac
gtggaggagtggggccaggtggtcatcatctccatgctgacgcgctacgcccgcacgcag
ttcgccagcccctggcgggagggggccgtgtttgcggaaaacgacgacaagaccttctac
gactcggacccggaagggaaagaagaggaagcggaggcgaaagcttacgcgatggacccg
gaccaccggctgctgctccgcaacaccaagccgctgctgcagagtcggaacacggcggtg
gtgatggcggtggcgcagctttactggcacctggcgcccaaacaggaagtcagcgtggtg
accaagtcgctggtgcgcctgctgaggagccacagggaggtccagtatgtggttctccag
aacatcgccaccatgtccattcagaggaaggggatgtttgagcccttcatgaagagcttc
tacgtccgctccactgacaacacgcacatcaaaacactcaagttggagatcctgaccaac
ctggcgaacgaggctaacatctccaccatcctgagagagtttcagacgtacgtgaagagt
caggacaaagcctttgcggcggccaccatccaggccatcgggaggtgcgccaccaacatc
agcgaggtgaccgacacctgcctcaacgggctggtgctgctgctgtccaacagggatgag
ggcgtggtggccgagagcgtggtggtcatccggaagttgctgctgacccagcccacccag
cacggcgagatcatcaagcacatggccaagctctttgacaaaatcaccgtgcccatggct
cgcgccagcatcctgtggctcatgggcgagtactgcgagcgcgtgcccaagatcgcgccc
gacgtgctgcgcaagattgcaaagagcttcacggcggaggaggacatcgtcaagctgcag
gccgtcaacctggcggccaagctctacctcaccaactccaagcagaccaagctgctgacc
cagtacatcctcaacctgggcaagtacgaccagaactacgacatccgggatcgcactcgc
ttcatacggcagctgatcgtgcccggcgacaagagcggcgccctcaacaagtacgctcgg
cgcatccttctggcccccaagcccgcccccgtgcttcagtcggccttcaaagatcgagat
cgtttccaactgggcacgctttcgcacagtctcaacagcaaagccgccggataccaggag
ctgtcggactggccggcggtggcgcccgaccagtccgtcagaaacgtggaggtccttgag
ccggtgaacgagtgggcgccgcccgtcgggaaggccaagcctcccaaatccgacgacaag
ttctactcggacgaggacgaacaggacgaagcgtcggagagcagcggcggcggcggcagc
ggcagcagcagcagcagcaacagcagcagcggcagcagtgaagcgtccgagtcggacagc
gacaaagaggacgagagcagcgaccagtccgataagagctccgccgactctgggaaaagt
tccggcgaatcggaaaagagctctgacggctcagagcggaggaagaagaccgccgccaaa
aagaagacgggcaaagctcaggtggagaaatgccacacagctgacagtgactccgagcaa
accagcggctcatccacccgaagctcctcctcggagtccggctcggactctgacgagcct
tctgccgcgaagcagcagatgaacgaggtggagtccaaagccaaggtgcaaaagacagcc
gagaaggaagtgtccttgctggatctcgatgactttttcccggcgcccgcaaacgccagc
gagtcttcggggctctcctccaatgtgctggccgacctggaaggactttcgctctctgcc
gtctcctccaccaccaccacgccggtgacgagtccgtctttcgtgccggtgcaaagctac
gacttgcttcaccacatgagcggcaagggcctgtctgcaaagtaccacttcccccgccgg
ccgtgcttgtacgggtccggcatggtggccgtgcaggtcacgctgagcaactgctgcgag
cgccccctggaggagatccacgtgggagagcgcggccccgccggcctccacattcaccct
ttcaacaccatcgagcgcttggatccggaggcttccgtgacggtctccatgggcatcgac
ttcaatgactccacgcaagcggccaacttccaactctgcaccaaagaggagcgctttgct
gttttcatccagcctgccgtgggcgaactgctgacaccctgcggcctctctgagacggac
ttctgcaaagagcaaagtcaactgcggggcatgaacgagacctcggcgaccatcgccgtg
gcgacgaacgatatgtccggccaagccgtcgccaggcgagttgcgtcggtggccaacgtg
ggcgccgtggcctcctccgagagtcatctccacaggtttgcggctcgcacggtgagcagc
ggggtcctggttctggtgcttctggatttgaaggaggagccgggcggcggcgccaagttg
accgtcaacaccgagaagagcgtcatggcgtccatgttgctgcgagacctcaaacgggcc
ctcagccaggcatag
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