KEGG   Syngnathus scovelli (Gulf pipefish): 125979369
Entry
125979369         CDS       T08785                                 
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
  KO
K12397  AP-3 complex subunit beta
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04142  Lysosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    125979369 (ap3b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sscv04131]
    125979369 (ap3b1a)
Membrane trafficking [BR:sscv04131]
 Endosome - Lysosome transport
  Others
   AP-3 complex
    125979369 (ap3b1a)
 Endosome - Golgi transport
    125979369 (ap3b1a)
SSDB
Motif
Pfam: Adaptin_N AP3B1_C AP3B1_C_2 Cnd1 HEAT_2 INTS1_R4
Other DBs
NCBI-GeneID: 125979369
NCBI-ProteinID: XP_049593466
LinkDB
Position
13:complement(14996369..15011125)
AA seq 1184 aa
MHRFRRQSRGGHVAVGNTFFSLLGFAKRTGRCLGEGVAEPPEEIRRSGGRFFPIDLQQKK
DTVRAALVICFAELLAMDARLLSFRSEAAVAVRSAAVSAEHLQLSLKADLSQEERTLTLS
ANKSPADRNEDLKEMLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELK
KLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVSIIVPIMMLAI
KEAAADLSPYVRKTSAHAIQKLYSLDPEQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVC
PDRIDLIHKNYRKLCNLLVDVEEWGQVVIISMLTRYARTQFASPWREGAVFAENDDKTFY
DSDPEGKEEEAEAKAYAMDPDHRLLLRNTKPLLQSRNTAVVMAVAQLYWHLAPKQEVSVV
TKSLVRLLRSHREVQYVVLQNIATMSIQRKGMFEPFMKSFYVRSTDNTHIKTLKLEILTN
LANEANISTILREFQTYVKSQDKAFAAATIQAIGRCATNISEVTDTCLNGLVLLLSNRDE
GVVAESVVVIRKLLLTQPTQHGEIIKHMAKLFDKITVPMARASILWLMGEYCERVPKIAP
DVLRKIAKSFTAEEDIVKLQAVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTR
FIRQLIVPGDKSGALNKYARRILLAPKPAPVLQSAFKDRDRFQLGTLSHSLNSKAAGYQE
LSDWPAVAPDQSVRNVEVLEPVNEWAPPVGKAKPPKSDDKFYSDEDEQDEASESSGGGGS
GSSSSSNSSSGSSEASESDSDKEDESSDQSDKSSADSGKSSGESEKSSDGSERRKKTAAK
KKTGKAQVEKCHTADSDSEQTSGSSTRSSSSESGSDSDEPSAAKQQMNEVESKAKVQKTA
EKEVSLLDLDDFFPAPANASESSGLSSNVLADLEGLSLSAVSSTTTTPVTSPSFVPVQSY
DLLHHMSGKGLSAKYHFPRRPCLYGSGMVAVQVTLSNCCERPLEEIHVGERGPAGLHIHP
FNTIERLDPEASVTVSMGIDFNDSTQAANFQLCTKEERFAVFIQPAVGELLTPCGLSETD
FCKEQSQLRGMNETSATIAVATNDMSGQAVARRVASVANVGAVASSESHLHRFAARTVSS
GVLVLVLLDLKEEPGGGAKLTVNTEKSVMASMLLRDLKRALSQA
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgcatcgattcaggaggcaaagtcgaggaggtcacgtggccgtcggcaatacgttcttc
tcgttgctcgggtttgccaaacggaccgggaggtgtctgggcgaaggagtagcggagcct
ccagaggagataagacgtagcggcggccgatttttcccgatagacctgcagcagaagaag
gacacggtgcgagcggctcttgtgatttgttttgccgagcttctcgccatggacgcgcgt
ttgttgagcttccgctcggaggcggccgtggccgtcaggtcggccgccgtgtcggccgag
cacctgcagctctccttgaaggccgatctgagccaggaagaacgcaccctgacgctctcc
gccaacaagtcgcccgctgacaggaacgaagacctcaaagaaatgctggagagcaacaag
gagtcgctcaaactggaggccatgaagcgggtcgtcgggctgatcgccaaaggaaaaaac
gcctcggagctgtttcccgccgtggtgaagaacgtggccagtaagaacatcgagctgaag
aagctggtgtacgtgtacttggtgagatacgccgaggagcagcaggacctggccttgctt
tccatcagcaccttccagcgggccctcaaggacccaaaccagctgattcgagccagcgcg
ctgagggtcctgtccagcatccgcgtctccatcatcgtccccatcatgatgttggccatc
aaggaggcggcggccgacctgtcgccttacgtcaggaagacatctgcccacgccatccag
aagctttacagcctggatcccgagcagaaggagcacctgatcgaagtgatcgagaagctc
ctgaaggacaagagcacgctggtggcgggcagcgtggtgatggctttcgaggaggtgtgc
ccggatcgcatcgacctgatccacaagaactaccgcaagctgtgcaacctgctggtggac
gtggaggagtggggccaggtggtcatcatctccatgctgacgcgctacgcccgcacgcag
ttcgccagcccctggcgggagggggccgtgtttgcggaaaacgacgacaagaccttctac
gactcggacccggaagggaaagaagaggaagcggaggcgaaagcttacgcgatggacccg
gaccaccggctgctgctccgcaacaccaagccgctgctgcagagtcggaacacggcggtg
gtgatggcggtggcgcagctttactggcacctggcgcccaaacaggaagtcagcgtggtg
accaagtcgctggtgcgcctgctgaggagccacagggaggtccagtatgtggttctccag
aacatcgccaccatgtccattcagaggaaggggatgtttgagcccttcatgaagagcttc
tacgtccgctccactgacaacacgcacatcaaaacactcaagttggagatcctgaccaac
ctggcgaacgaggctaacatctccaccatcctgagagagtttcagacgtacgtgaagagt
caggacaaagcctttgcggcggccaccatccaggccatcgggaggtgcgccaccaacatc
agcgaggtgaccgacacctgcctcaacgggctggtgctgctgctgtccaacagggatgag
ggcgtggtggccgagagcgtggtggtcatccggaagttgctgctgacccagcccacccag
cacggcgagatcatcaagcacatggccaagctctttgacaaaatcaccgtgcccatggct
cgcgccagcatcctgtggctcatgggcgagtactgcgagcgcgtgcccaagatcgcgccc
gacgtgctgcgcaagattgcaaagagcttcacggcggaggaggacatcgtcaagctgcag
gccgtcaacctggcggccaagctctacctcaccaactccaagcagaccaagctgctgacc
cagtacatcctcaacctgggcaagtacgaccagaactacgacatccgggatcgcactcgc
ttcatacggcagctgatcgtgcccggcgacaagagcggcgccctcaacaagtacgctcgg
cgcatccttctggcccccaagcccgcccccgtgcttcagtcggccttcaaagatcgagat
cgtttccaactgggcacgctttcgcacagtctcaacagcaaagccgccggataccaggag
ctgtcggactggccggcggtggcgcccgaccagtccgtcagaaacgtggaggtccttgag
ccggtgaacgagtgggcgccgcccgtcgggaaggccaagcctcccaaatccgacgacaag
ttctactcggacgaggacgaacaggacgaagcgtcggagagcagcggcggcggcggcagc
ggcagcagcagcagcagcaacagcagcagcggcagcagtgaagcgtccgagtcggacagc
gacaaagaggacgagagcagcgaccagtccgataagagctccgccgactctgggaaaagt
tccggcgaatcggaaaagagctctgacggctcagagcggaggaagaagaccgccgccaaa
aagaagacgggcaaagctcaggtggagaaatgccacacagctgacagtgactccgagcaa
accagcggctcatccacccgaagctcctcctcggagtccggctcggactctgacgagcct
tctgccgcgaagcagcagatgaacgaggtggagtccaaagccaaggtgcaaaagacagcc
gagaaggaagtgtccttgctggatctcgatgactttttcccggcgcccgcaaacgccagc
gagtcttcggggctctcctccaatgtgctggccgacctggaaggactttcgctctctgcc
gtctcctccaccaccaccacgccggtgacgagtccgtctttcgtgccggtgcaaagctac
gacttgcttcaccacatgagcggcaagggcctgtctgcaaagtaccacttcccccgccgg
ccgtgcttgtacgggtccggcatggtggccgtgcaggtcacgctgagcaactgctgcgag
cgccccctggaggagatccacgtgggagagcgcggccccgccggcctccacattcaccct
ttcaacaccatcgagcgcttggatccggaggcttccgtgacggtctccatgggcatcgac
ttcaatgactccacgcaagcggccaacttccaactctgcaccaaagaggagcgctttgct
gttttcatccagcctgccgtgggcgaactgctgacaccctgcggcctctctgagacggac
ttctgcaaagagcaaagtcaactgcggggcatgaacgagacctcggcgaccatcgccgtg
gcgacgaacgatatgtccggccaagccgtcgccaggcgagttgcgtcggtggccaacgtg
ggcgccgtggcctcctccgagagtcatctccacaggtttgcggctcgcacggtgagcagc
ggggtcctggttctggtgcttctggatttgaaggaggagccgggcggcggcgccaagttg
accgtcaacaccgagaagagcgtcatggcgtccatgttgctgcgagacctcaaacgggcc
ctcagccaggcatag

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