KEGG   Syngnathus scovelli (Gulf pipefish): 125979373
Entry
125979373         CDS       T08785                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125979373 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sscv03009]
    125979373 (wdr36)
Ribosome biogenesis [BR:sscv03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    125979373 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_RIG_1st WD40_like
Other DBs
NCBI-GeneID: 125979373
NCBI-ProteinID: XP_049593477
LinkDB
Position
13:15281514..15286852
AA seq 886 aa
MAGGGGSSLFSGFRLLGLYCNHVPHVLRYHRKHREFYLVTSVGKCLHTYNVNRLGIVAIS
NSLQDDITCLAADRMLTFAAAGSLVLAFAKNKEVVMRYRGHKQEVRLLLPFGDQLISVDG
GGLLVVWDVQSGEVYTQLHFEPVAFEVSALMHPSTYLNKVLLGSCQGPLQLWNLKSSKLL
YTFAGWSAGVTVLQQSPAVDVVGVGTATGRIVIHNIRLDETLMAFTQDWGPITSLAFRTD
GPPTLAAGSPQGHLALWDLERRQLAAQLRHAHKTAVNASFLHGEPLLITTAADNAIKVWI
LDQEGGGARLLRNRQGHSAPPTTIRHYDGKNILSAGQDGTLQSFSTVHERLNKNLGHGSL
NKKKEQKKKKGLSYEELRLPAVTAFSCAAARRSDWDGIVACHRGRLATTTWSYQRCTMGE
YHLRPPPGCGSGAVATAVDITSCGNFALVGSSCGRVDVYNLQSGLHRGCYGDEQKAHGGA
VRGVATDTLNQQTVTAAADGLLKFWRFKTRRLEDQIQLNTAPASMKLHRESGMLAVALDD
FTLLAVDVETRRAVRKFAGHLGSTNDMTFSPDGRWLITVGMDCAVRTWDLPSGSLVDCFL
VPVAPVGVSMSPTGDFLATSHVDSLGVCLWTNKSLRGPVGLRPLPPDYRPETETLPGAPE
AEREVTSEEEEGPDEAYASAEQLGAELVTLSQLPESRWKHLLCLDTIKRRNKAATPPVSG
PSAPFFLPTVPGLTPRFSQPQQEMQSKVSSCSLPSRGSKFSCALEAGLGAGSFTVPAELL
KSFGPSAVSVELAGLSPEGGGASGGGLFLAFIRMIESMLASGRDFDLAHAYLSLFLKLHL
RSLAQDAVAMEALVRLSSRLEAGWAELRASFNQSLCLLTYAKSALL
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggcgggaggaggcggaagtagtttgttcagcggattccggcttttggggctttactgc
aaccacgtgccgcacgtgctccgctaccatcgtaaacatcgggagttctatctggtgact
tcagtcggcaaatgtttgcacacgtacaacgtcaatcgtttgggcatcgtggccatcagt
aacagcctccaggatgacatcacgtgcttggcggcagacaggatgttgactttcgccgcc
gccggctcgctggtgctggccttcgctaagaacaaagaggtggtgatgcgttaccgtgga
cacaaacaggaagtgcgcctgctgcttcctttcggcgaccagctgatctcggtcgatggc
ggcgggctcctcgttgtctgggacgttcaaagcggcgaagtgtacacgcagctgcacttt
gagcccgtcgccttcgaggtgtcggccttgatgcaccccagcacctacctgaacaaagtc
ctgctggggagttgccagggcccgttgcagctgtggaacctcaagagcagcaagttgctg
tacacgtttgccggctggtcggccggcgtcactgtgctgcagcagagcccggcggtggac
gtggtgggtgtcggcacggcgacgggccgcatcgtcattcacaacatccgactggacgag
acgctgatggccttcacgcaggactggggccccatcacgtcgctggcttttcgaacagac
gggccgcccacgctggcggcgggaagccctcaaggtcacctggccttgtgggacctggag
cgacggcagcttgcggctcagctgagacacgcccacaagacggcggtgaacgccagcttc
ctgcacggcgagccgcttctcatcaccaccgccgctgacaacgccatcaaggtctggatc
ctggaccaggaagggggaggagccaggttgctgaggaatcgccagggtcacagtgccccg
cccaccaccatccgtcattatgatgggaaaaacatcctcagcgcaggtcaagatgggaca
ctgcagtctttttctaccgtccacgagcgactgaataagaacctcggacacggctcgctc
aataagaagaaagagcagaagaagaagaagggcttgtcgtacgaagagctgcggctgccc
gctgtcaccgccttctcctgcgcggcggctcgccggtcagactgggacggcatcgtggcg
tgtcaccgtggtcgcctggcgaccaccacctggagctaccagcgctgcaccatgggggag
taccacctcaggccgccgccgggatgcggcagcggcgccgtcgccacggccgtcgacatc
acttcctgcgggaactttgccctcgtggggtcttcgtgcggccgcgtcgatgtttacaac
ctgcagtccggacttcaccgcggttgctatggagacgagcagaaagctcacggcggcgca
gtgcggggcgtggccaccgacacgctcaatcagcagactgtcaccgccgcggccgatggg
ctcctcaagttctggcgcttcaagacccgcagactggaagaccagatccagctaaatacg
gcgcccgcgagcatgaagctccacagggagagcggtatgctcgcggtggctctggatgac
ttcacgctgctggcggttgacgtggaaaccaggcgagccgtccgcaagtttgccggtcac
ctcggcagcaccaacgacatgactttcagcccggacggccgctggttgatcaccgtcggg
atggactgcgccgttcgcacatgggacctcccgtccggcagtctggtggactgcttcctg
gttcccgtggcgccggtgggcgtgtccatgtcccctaccggagacttcctggcgacttcg
cacgtggacagcctcggcgtgtgcttgtggaccaataagagcctgcgtgggcccgtgggg
ctccgcccgctgccgcccgactaccggccagagacggagactctgccgggggcgccggag
gccgagcgggaggtgacatcggaggaggaggagggacccgacgaggcgtacgcctcggcc
gagcagttgggggcggagctcgtgacgctgtcgcagctgccggagtccagatggaaacat
ctgctgtgcctggacactatcaagagaaggaacaaagcggcgacgcctcccgtgtcgggg
ccgtctgcgcctttcttcctgcccaccgtgccgggcttgacgccgcgcttctcccaaccg
cagcaggaaatgcagtccaaggtgtcgagctgcagtctgccctctcggggctcaaagttc
agttgtgctctggaggcgggtctcggcgcggggtcgttcaccgtccccgcggagctcttg
aagagtttcggtccgtctgccgtgtcggtggagctcgccgggctgtcacctgaagggggc
ggagccagcggcggcggcctctttttggccttcattcgcatgatcgagagcatgctggcc
agtgggcgggactttgatctggcgcacgcctacctgtcgctctttctcaagcttcacctg
cgctcgctggcccaggatgccgttgccatggaagcgttggtccgcctctcctcgcggctg
gaggctgggtgggcggagctccgcgcatccttcaatcagtcgctttgtttgttgacgtac
gccaagagcgcacttttgtga

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