Syngnathus scovelli (Gulf pipefish): 125979394
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Entry
125979394 CDS
T08785
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125979394 (prom1a)
04090 CD molecules [BR:
sscv04090
]
125979394 (prom1a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125979394 (prom1a)
CD molecules [BR:
sscv04090
]
Proteins
125979394 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF3587
Tweety
Motif
Other DBs
NCBI-GeneID:
125979394
NCBI-ProteinID:
XP_049593540
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All DBs
Position
1:complement(20552888..20588745)
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AA seq
900 aa
AA seq
DB search
MAKSGTLVLLCMLLGSGELQEPEPRRLPPPPAKLDFGYVPAGVYETVAHYEPGPIGILVH
MVHTFLCAVQPNDFPKDLLIRLAKDKFGALQTEYQKPENIVLSLQALYYEVGFLVCAAVG
VLFTVLVPVVGLFFCLCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCA
YAANQTLSAQVKNIRRLVNSNMRDLHTFANDTPMQIDYLTSQYAIAKNQVLHDVENIGPL
LGGRIRDALDKEVHPALDAGLKMTGVKIDRAIKAMRETKEALENVSVSLQVLQEATSKLD
FNLSLVRANIKRSLNDPGCHDEESDATSAQLCRGILQSLEQLHISANFTRLPNVNAQLEK
MNDVLKTDLSTVINKGYASLNDTPYMVMVQTRPVVDPMQSLVDNIGENIGNLSKMLPVQN
SLSKFTIFISHVHAKIEDQYPEIDKLDFYRWTGCVSLCCILVLVLAFNYLGLLCGTLGYD
KHASPTTRGCISNTGGTMLMAGVGFSFIFSWILMGLLTIIFLVGGNMEKLICEPFHTKEL
FKVVDAPYLVNPEWRNFIPGYLYNDSELDLTAESLYSTCKENKGIYSALRLDKVFNVSSF
LNTTMFTADMVTLLSSVKIDLRGIILLEAESKQNLLDFSEAGLSEINYADYLEEVNKGVT
VVDLLSFAKELEAQTDLMPRGPLQTSLKGHVGTVRQIHSHQVVPMQQAMKYVRARSSLNQ
NMRFLERTASDLPNKVLAILDAINATQYLISQNATHLINQESTKYASTIVGYFHQYIEWV
KTSLAMEVAPCKPFSNVLDTAEIFTCSFLVDSMNVFWMGLGCSTLFLIPSIALAVKLAKF
YRRMDTEDVYDDMGSGNNGYHSEPPQGILNPPVTRVSQNPMNVHLILLFPERQAWQNAWD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagcggaactctagttcttctctgcatgctgctgggctccggggagctccaa
gaaccggagccacgaaggctgccacccccgccagctaagttggacttcggctatgtgccc
gccggagtgtacgagacggtggcccactacgaaccaggacccatcggcattctggttcac
atggtgcacactttcctgtgcgcggtccagcccaacgacttcccgaaagatcttcttatc
agactggccaaggacaagtttggagcccttcagactgaatatcaaaagccagagaacata
gtgctgagcctgcaggcactctactacgaggtgggattcctggtatgtgcggcggtgggt
gtcctgttcaccgtcctggtgcctgtggtgggcctcttcttctgcctgtgccgctgctgc
gacaactgcggtggcgagatgcaccagcggcagaggaagaacgccgactgtcgacgaggc
ctgctgggaacgctgcttttctccacctcgctggtcatcacgattggtgtgttgtgcgca
tacgctgccaaccagactctcagcgctcaggtcaagaacatccgacgtctggtcaacagc
aacatgagggacctgcacaccttcgccaacgacacgccaatgcaaatcgattacctcacc
tcacagtatgccatcgccaaaaaccaagtcctccacgatgtggagaacataggtccgcta
ttaggtggaaggatacgcgacgcgttggataaggaggtgcacccggctttggacgccggc
cttaaaatgacaggagtgaaaatcgaccgagccattaaagccatgcgtgaaactaaggag
gccctggagaatgtgagcgtgtccctgcaagtgctgcaggaggccacgagcaagctcgac
tttaacctgagcctggtccgcgccaacatcaagcgctccctcaacgaccccggttgccac
gatgaagagtcagatgccacctcggcccagctgtgccggggcattctccagtcgctcgag
cagctgcacatcagcgccaacttcacacggcttcccaacgtaaatgctcagttggagaag
atgaatgatgtgttaaaaacagacctcagcaccgtcatcaacaagggttacgcatccttg
aacgacacgccttacatggtgatggtacagacccggcctgttgttgacccaatgcagagt
ttagtggacaacatcggtgaaaacataggcaacctgtccaaaatgttgcccgtacaaaac
tccttgtccaagttcaccatcttcatcagccacgtccacgccaagattgaggaccagtac
cctgaaattgacaagctggacttctacaggtggacgggctgcgtgtctttgtgctgcatt
ctggtactggtgctggccttcaactacctgggcttactgtgcggcacactaggatacgac
aagcacgcctcgcccactacacgaggctgcatctccaacacgggaggcaccatgctcatg
gctggcgtgggtttcagcttcatcttctcctggattctgatgggcctgctgaccatcatc
ttcctggtgggtggcaacatggagaagctcatctgcgagccgtttcacaccaaggaactc
tttaaggtggtggacgctccatacctggtgaatcctgagtggaggaacttcatcccaggg
tacttgtacaacgactcagagctagatctcacggcagagagcttgtacagcacttgcaaa
gaaaacaaaggcatctactccgccctgcgcctggacaaagtttttaatgtatcatctttc
ctcaacaccacaatgttcacagcggacatggtaacccttttgagcagcgtgaagattgac
ctgagagggatcatcttgctggaagcggagagcaagcagaaccttctggatttctccgaa
gcgggtctgtcggaaataaactacgcagattacctggaagaggtcaacaaaggcgtcaca
gtggtggacctgctctcatttgccaaagagctggaagctcagacagacctgatgcctcga
ggtcctctgcaaacgtctctgaaaggtcacgtgggcaccgtgcgacagatccacagccac
caggtggtccccatgcagcaggccatgaaatatgttagagccaggagctcccttaaccag
aacatgaggttcctggagagaacggcctcagacctgccaaacaaagtcttagctatacta
gacgccatcaacgcaacccagtatctcatttcccagaatgcaacacatcttattaatcag
gagagcacaaaatacgcatcaactattgtgggttacttccatcaatacatagagtgggtc
aagacatcactggcaatggaggtggcaccatgcaagcctttcagcaatgtgctggacaca
gcggaaatttttacctgcagcttcctggtggactctatgaatgtgttctggatgggtctg
ggctgcagtacactcttcctcatcccaagcatcgcgttagctgtcaagctggccaagttc
taccgcaggatggacacggaggacgtttatgacgatatgggaagtggtaataatggttat
catagcgagcccccacaaggcatcctaaacccccccgtgaccagagtcagccaaaatcca
atgaatgtgcacctgatccttttgttcccagagaggcaagcatggcaaaacgcttgggat
tga
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