Syngnathus scovelli (Gulf pipefish): 125979396
Help
Entry
125979396 CDS
T08785
Name
(RefSeq) hyaluronan and proteoglycan link protein 1 isoform X1
KO
K06848
hyaluronan and proteoglycan link protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125979396
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125979396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
V-set
Ig_3
I-set
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
125979396
NCBI-ProteinID:
XP_049593537
LinkDB
All DBs
Position
13:15230214..15233934
Genome browser
AA seq
385 aa
AA seq
DB search
MEASLTVLFCSEPNLRVAKMSGAIRALTLASLWLSAADGFRSFSPEPDFSPNVHETDNAQ
PALSVTSQPSRVLSRRGGNATLPCTVRRDGWPAPNGKMRIKWTKLTSGLLTEVDVLAAAE
QHKRSYGGFHGRVRLRSSSPWDASLVIDDITLDDYGSYKCEVIDGLEDAAAVVSLDLEGV
VFPYSPRLGRYNLKFRDAERACREQDGVVASPEQLREAWRRGLDWCNAGWLSDGSVRYPV
TSPREPCGGQSTPAGVRNYGPRDKDSSRFDVFCFTSHYKGDFYFLPRVGKLTYGEAAAAC
RRDGARLATVGHMYAAWKLAGYDRCDAGWLADGSVRYPVARPRPRCSPARPAVGFLGFPD
KKHKLYGVYCFGPGRRAARRHRGAR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgtctttgaccgtcttattttgcagtgaaccgaatctgcgagtggcgaagatg
agcggcgccattcgtgcgctgacgttggcctcgctgtggctgagcgcggccgatggcttc
cgatcgttttctcccgagccggacttttccccgaacgtccacgagacggataacgcgcag
ccggcgctgtccgtgacgtcacagccttcccgagtgttgtcacggcgcggcggcaacgcc
accttaccttgcaccgtccgccgggacgggtggccggcgcccaatgggaagatgaggatc
aagtggaccaagctgacgtccggcttgctgacggaggtggatgttttggccgccgccgag
cagcacaagagaagctacggaggtttccacggccgcgtgcgcctgcggagctcttcccct
tgggacgcctcgctggtcatcgatgacatcactttggatgattacggaagctacaaatgt
gaggtcatcgacgggctggaggacgcggcggcggtggtgtcgctcgacctggaaggggtg
gtgttcccgtattccccccggctgggccgctacaacctcaagttccgggacgccgagcgg
gcctgccgggagcaggacggcgtggtggcgtccccggagcagctgcgcgaggcttggcga
aggggcctggactggtgcaacgccggctggctgagcgacggctctgtgcgctaccccgtc
acctcccccagggagccctgcggcggccagagcacaccggcgggcgtgcgcaactacggc
ccgagagacaaagactccagccgctttgacgtcttctgcttcacgtcgcactacaaaggt
gatttctacttcctaccgcgggtgggcaagctgacgtacggcgaggcagcggcggcgtgc
cggcgggacggcgcccggctggccaccgtgggccacatgtacgccgcctggaagctggcc
ggctacgaccgctgcgacgccggctggctggccgacggcagcgtccgctaccccgtggcc
aggccccgcccgcgctgcagtcccgcccgcccggccgtcggcttcctcggattccccgac
aagaagcacaagctgtacggcgtctactgttttgggcccggacgccgggcagcacgccgg
caccgaggcgctcgctaa
DBGET
integrated database retrieval system
