Syngnathus scovelli (Gulf pipefish): 125979405
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Entry
125979405 CDS
T08785
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125979405 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125979405 (xrcc4)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125979405 (xrcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XRCC4_C
XLF
PAXX
Anticodon_2
DivIC
Motif
Other DBs
NCBI-GeneID:
125979405
NCBI-ProteinID:
XP_049593561
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Position
13:complement(15240003..15242023)
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AA seq
304 aa
AA seq
DB search
MPAEMHSSVREIPLSSEPDSSYFLRVDESGRGLAYGFQLLLSDGRHAWSGEASEASVSQE
AAELEMSTEKYVQDLREALTGEAGVHSYRFALAPATPDGALTLTYDKVQKDISFRLGSTR
LGPVTEPEQIVGALLSRSLERAASLERHNRELREHNLRLRREHVRFGAELERYTSGKEAL
EAELYARFLHVLNEKKAKMRGLRQTLEQLREAGSGEKRERAAEEPEGDAAPAAVASSGGA
RSPGLCDDSLIDIGDVAPSRKRRFRRPGALDVAVERAHASRSDSPAAASQPPAAEEVEDL
FEDL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagagatgcactcgtccgtgagggaaatcccgctctcgtccgagcccgactcc
tcctacttcctgcgtgtggacgagagtgggcggggcttggcctatggtttccagctgctg
ctcagcgatggacgacacgcttggagtggagaagcgagcgaggcgtccgtgagtcaggag
gcggctgaactggagatgtccacggagaagtacgtccaggacctgcgggaggcgctgacg
ggggaggcgggcgtccactcttaccgcttcgccctggcgccggccacgcccgacggcgcc
ctcacactgacctacgacaaagtgcagaaggacatctcgttcaggctaggctcgacgcgg
ctcgggcccgtcaccgagcccgagcagattgtcggggctctgctgagccgcagtttggag
agagccgcttctctggagcggcacaaccgggagcttcgggagcacaacctacggctgcga
cgggaacacgtccgcttcggcgctgagctggagcgctacaccagcggtaaggaggccctg
gaggcggagctttacgctcgctttcttcacgtcctcaacgagaagaaagccaagatgcgc
ggcctgcgacagacgctcgagcagcttcgggaagccgggagcggcgagaagcgagagcgg
gcggctgaggagccggagggagacgcggcgccggcggccgtcgcatcttccggcggggcg
cgctctcctggcctgtgcgacgacagcctgatcgacatcggcgacgtggcgcccagtcgc
aagcggcgcttccgccgcccgggagccttggatgtggccgttgagcgagcgcacgcaagc
aggagcgactccccggcggcagccagtcagccgccggcggcagaagaagtcgaggacctc
tttgaggacttgtga
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integrated database retrieval system
