Syngnathus scovelli (Gulf pipefish): 125979430
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Entry
125979430 CDS
T08785
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
sscv04150
mTOR signaling pathway
sscv04218
Cellular senescence
sscv04910
Insulin signaling pathway
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125979430 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125979430 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
125979430 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125979430 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125979430 (tsc1b)
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Gene cluster
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Motif
Pfam:
Hamartin
Trimer_CC
Sec10_N
Motif
Other DBs
NCBI-GeneID:
125979430
NCBI-ProteinID:
XP_049593596
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Position
13:complement(13624891..13632573)
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AA seq
1257 aa
AA seq
DB search
MAREQPSTGDLLPLLETSDLHQLEEIRGLINEQLSTERGSVLLNGLVDYFLETNSPEAMH
ILCAVREPHDKHLLDKMNECMTKQACRLPTLTMLGHVIRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLITLLPMIPQAGKQHLWEYFDIFGRLASWNLKNPGHISEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKKYEIHDIVIECAKVSLDPKEASCEEGYATMPENFYPQVHLRPQDCTSSPYT
DLYSSYGSSSSTPFSTPRQPLPPPLSLPPLSGTQSNNRSPQTTKRQNSTCEANASNGGKD
PLWSPSSLCGMATPPSSRGMSPNLELSHSASHLPSRFHCTSGGKGTSASSTPATSSPPPT
LSDDFPIISLPANTVHSSPPRKERRHGDGGKPILVRQEPVKDSEKSGATNRDAADAASVS
MTLTELSVFMKKQELELQLRTEKEKEEAAITEELLKITEDKQELSGLRGFDSPFYRTTET
LTGCQTQDKIVTNSQVGGAILDLRHAVSTPDKAENNTSASDVGSEQGGGDSRSSTGGLNQ
SWPFLSGFTPIDHHLHRSPSAPEDEAGKFAMFSPSPCGKTPAPVPYEVFFDLALPRAASL
YIHQKTSEAVHKAALERLSRREEGLEDGEEEGLMTASPLEVLDRLVQQGSDTHDKVLKSL
PLPSKSADWTHFGGSAPSDELHTLRSQLLLLHNQLLYERYKREQHAVRNRRLLRRIINAT
ALEEQNNAMKDQLNLQSVDITSLRESLQVEQQRYRQLWDDRETVVTRLHSQIRQLQQGRD
DYYTKNQELQSKLQECQKRMGELEAELQGANNKVCHTGHLLKQMTIKLRNSEGTQQQMSF
LNKQLLLLGEAHKLSMQELKFAGAANTKRPSSHEAQMLQVSHRKEVETLRQNLLVQGQKL
EAAHQRAAELETLLSKKEHLIAEQKKFLEDVKCQAKAELQASDSRYQAQKRIAQLLQTEI
LQLYSKVEMEVPASLPPGLKADRHAPADSSSILVPDGPSKTRTNEEMDGRPARDSHCDNG
STLLAGHLKASKSSKSTANSVNGSKECGPSLMADRPLSCPRTNPLAMLTPSDAPLTVGSY
PSDKSYIGIRSRELFRNKSESQCGEEEEEDEQPSKAEPCAEPPGPGARLSLAPAPTATPS
PAAPPARPAKTSSESKQQVPGHESPRRKIGRGSLGTGRPRQQQLKIMDYNETHHEHS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggagcagccgagcacgggggacctcctcccgctcttggagacctccgacctc
caccagctagaagagatcagaggccttattaatgaacaactcagcaccgaacgagggtct
gtgctgcttaacgggctggtggactactttttagaaacaaactccccagaggccatgcat
atcctctgcgcagtccgagagccgcacgacaagcaccttctggacaagatgaacgagtgc
atgaccaaacaggcgtgtcggctgcccaccctcaccatgctcggccacgtcatccgcaag
cagccgtcctggatccataagattgcccgataccctcttctgctctcgctgctcaaatgc
ctaaagactgatacggatgtggtggtgctgataactggtgtgctggtgctgatcacgctt
cttcccatgattcctcaagcgggaaaacaacacctgtgggagtactttgatatttttggc
cgcttggcatcctggaacctcaaaaatcccggtcacatttcagaggtttacttgatccac
ctccacgccagcgtctattcgctcttccatcgtctgtacggcatgtacccttgcaacttt
gtgtcctacctgcgctcgcactatagcatgaaggaaaacatggaaacatttgaagaagtg
gtcaagccaatgcttgaacacgtccgaatccaccctgaactggtgacaggaaccaaggat
catgagcttgaccccaccaggtggaaaaagtatgaaatccacgatatcgtcattgaatgt
gccaaagtgtctctggacccgaaggaggcctcctgtgaggaaggatatgccaccatgcct
gagaacttctaccctcaagtccatctgcgaccacaagactgcacttccagcccttacacg
gacctctacagcagctatggaagctcttcatccactccgttctccactccgcggcagccg
ctgcctccgcccctgtctttgccccccctctcagggacacagtccaacaatcgtagccca
cagaccaccaaacggcagaactccacctgtgaagctaacgcctccaatggcgggaaggac
ccactgtggagcccctcctctttgtgtggaatggccacgcccccttcatccaggggcatg
tcgcccaacttggagctctcccacagtgcctcacaccttcccagccgcttccactgcact
tccggagggaaaggaacatctgcctccagtactccagccacttcatcaccgccccccacc
ctgtcagatgactttcccatcatctccctaccggccaacacggtccactccagtccaccc
agaaaagaacgcagacatggcgacggtgggaaaccaatactggtgagacaggaacccgtg
aaagactctgagaaaagcggcgcgaccaacagagatgccgcggacgccgcgagcgtgtcc
atgacgttgaccgagctgtcggttttcatgaagaaacaagagttggagcttcagttgaga
acggaaaaagaaaaagaggaggcggctatcactgaggagctgctcaagatcacagaggac
aagcaggagctttcaggcttgaggggattcgactcccctttctaccgcaccaccgagact
ctgaccggctgtcagacgcaagacaagatcgtcaccaacagccaagtgggcggggccatc
ctggacctacgccacgcggtgtctacgccggacaaagcggagaataacaccagcgccagt
gacgttggaagcgaacagggagggggtgacagccggagttcaaccggcggcctcaatcag
tcctggcccttcctgtcaggtttcacccctatcgatcaccacctccaccgaagcccctcg
gccccagaagatgaagcgggaaagtttgcgatgttctcgccaagcccctgcggcaagacc
ccggcgccggtgccgtacgaggtgttcttcgacctagctctgcccagggcggcctcgctt
tacatccatcagaagacatcggaggccgtccacaaagcggcgctggagaggctctcgaga
cgggaagaggggctggaagacggcgaggaggaggggcttatgaccgcttcaccactggag
gtgctggatcgccttgttcagcaggggagcgacacccacgataaagtcctcaagagctta
cctttgccaagtaagtcagctgactggacgcactttggagggtcggctccatctgacgag
ctccacacgctgcggagccagctgctcctgctgcacaaccagctgctttacgagcgctac
aagcgagaacagcacgccgtccgcaacaggcgcctcctgcgacgcatcatcaacgccacc
gcgctggaagagcagaataatgccatgaaggaccagctgaacctgcagagtgtggacatc
acgtccctgagggagagtctccaggtggagcagcagcgctacaggcagttgtgggacgac
cgcgagacggtggtgacccgtttgcacagtcagatccgacagcttcagcaagggcgggat
gactactacaccaagaaccaggagctgcagagcaagttacaagagtgtcagaaaaggatg
ggcgaattagaggcggagcttcagggagcgaataacaaagtctgtcacactgggcacctg
ctcaaacagatgaccatcaagttacgcaacagtgagggcacccagcagcaaatgagcttc
ctgaacaaacagctgctgctccttggggaggcacacaaactgtccatgcaggaactgaag
tttgcaggcgccgctaataccaagcgacccagcagccacgaggcccagatgctgcaagtg
tcccacaggaaggaggtggagactctgagacagaacctgctggtccagggccagaaactg
gaggcagcgcatcagagagccgctgagctggagacgctactctccaagaaggaacacctc
attgctgaacagaagaagtttcttgaggatgtcaaatgtcaagcaaaggcagagctgcag
gcctccgacagcaggtaccaggctcagaagagaatcgcccaactgctgcagaccgaaatc
ctgcaactgtacagcaaagtcgagatggaagttccagctagcttgccgccggggctgaaa
gctgaccgacacgcgcctgccgattccagcagcatcctggtgcccgatggaccaagtaaa
actcgcaccaatgaggagatggacggtcgaccagcacgagactcccactgcgacaacggc
agcactttattagcagggcatctcaaggcgagcaaatcttccaagagcaccgccaactcg
gtcaacggcagcaaggagtgcggcccgtctctaatggccgaccgccccctgtcttgcccc
cgcaccaacccgctggcaatgctgacgccatccgacgcccccctcaccgtgggctcctac
cccagtgacaagagctacatcggcataaggtcgcgcgagctctttcgtaacaaaagcgag
agtcaatgcggcgaggaggaggaagaggacgagcagccgtcgaaggctgagccgtgcgca
gagccgccgggtcccggcgcccgcctcagcctcgcgcccgccccgactgcgaccccgagc
ccggccgctcctcctgctcgacctgccaagacttcctcggagtccaaacagcaggtcccc
ggtcatgaaagccctcgtaggaagatagggcggggctccttggggaccgggcggccccgg
cagcaacagcttaagatcatggactacaacgaaacgcatcatgagcacagttag
DBGET
integrated database retrieval system
