Syngnathus scovelli (Gulf pipefish): 125979476
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Entry
125979476 CDS
T08785
Symbol
slc4a5b
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 4 isoform X1
KO
K13857
solute carrier family 4 (sodium bicarbonate cotransporter), member 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125979476 (slc4a5b)
04147 Exosome [BR:
sscv04147
]
125979476 (slc4a5b)
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
125979476 (slc4a5b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125979476 (slc4a5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Band_3_cyto
HCO3_cotransp
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
125979476
NCBI-ProteinID:
XP_049593679
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Position
13:15512238..15524678
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AA seq
1165 aa
AA seq
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MDQHEWRRARDRGHCRYDDNDDEDVEASYLGSPASRRQKRRRRRSSERRHDGEHAARRSH
YERRACQEHRQHARPAFYRDSDNDDDQGRDRHAQIVERADLSVSPAAERLRHILGEDDGT
PTPTIFTEMDTLQQEGGELEWKESARWVKFEEKVEEGGERWSKPHVSTLTLHSLFELRTC
LQTGSILLDLEAFSLAQIVDEMVERQIADGLISEEVKDKIVFVLLRKHRHQTKKPIHRSL
ADIGKSSAAGTNRSPQANLSRTSSAVRRSTDDLPTRRAGSLGGLHHAQSRSMNDISETPS
SDQMRNKFMKKIPRDAEASNVLIGEVDFLDKPFVSFVRLAQATTLGGLTEVPVPTRFLFI
LLGPPGKTKSYNEIGRAIATLMVDELFSDVAYKAREREDLIAGLDEFLDEVIVLPPGEWD
PKIRIEPPKKVPSAEMRKSVLNLNEPPAQTNGSAGGAAGGDDEQLPVQHAVGEELKFTGR
LGGGLWLDVKRKTPWYCSDIYDGFHIQSVSAVLFIYLGCITNAITFGGLLGDATDNYQGV
MESFLGTALAGSVFCLFGGQPLIILSSTGPILIFEKLLYEFCKNNSVDYMELRLWIGIHS
CLQCLVLVLSDASYIIQYMTRFTEEGFSSLISFIFISDAIKKMVGAFKYYPINRSFKPDY
ATSYKCDCVPPDQGEFSFCRSQSAARASRSSFVFLPFSLAATCPEHVSTNVSAASSASLC
FFDESGRKAAPLSPRRSRRRHLSSSGRRQRVASVQRQRSGLDSAEQDGVRGVRRCPGGQS
VQVRARSGPHVLHPLLRHLLHDRGAQEVQVQPLLPHQAASADQRLCHRYLHPSFLRTGRL
SGPGHGQTAHSHAHQAHARRPRLVGDAVREESVVVVPGQLRAGAAGHHPDLHGPADQRRH
RQPQGEQTQERLRVPPGPVLGGHPDGRVLLHGAAVVRGRHRHLHRAHRLAQDGERVQRPR
GAAPVPGGPRAEADRNSGLCPHGTFCVPRPRPAVHPHAGAVRRLPLHGRGFAQRDPVLGA
HQVVPDAAQAPAGLCLPASCPSAPSPPFHPGPDHLPGHPLGPQVHLPGHHLPRDVSLSQQ
QQQQQQQQQEQHGHQWACSRTTWPGWTTSCPTKTRKTKMTRKRRRRRRRKAPPRRRVTRS
VANVAACSFFRLLLPEHNATAFCLR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcacgagtggcggcgcgccagagacaggggtcactgtcgctacgacgacaac
gacgacgaggacgtggaggcatcctacttgggcagtccggcttcccgccggcagaagcga
cgtcgccggcgctcatcggaacgccggcacgatggcgagcacgccgcacgccgctctcac
tacgagcgacgcgcctgccaggagcaccgccagcacgcccggccggccttctaccgggac
agtgacaacgatgacgaccaaggccgcgatcgccacgctcagatcgtggagcgcgccgac
ctctcagtgtcgccggcggccgagcggcttcgtcacatcctgggggaggacgacggcacg
cccacgcccaccatcttcactgagatggacacgctgcagcaggagggcggcgagctggag
tggaaggagtcggccaggtgggtgaagtttgaggagaaggtggaggagggcggcgagcgc
tggagcaaaccgcacgtgtccacgctgacgctgcacagcctctttgagctgcgcacgtgt
ctgcagaccggcagcatcctcctggacctggaggccttctccctagcgcagattgtcgac
gagatggtggagcggcagatcgccgacggcctgatctcagaggaggtgaaggacaagatt
gtctttgtgctgctgcgtaaacaccgtcaccagaccaagaagcccatccatcgctcgctg
gccgacatcgggaagtcgtccgccgccggcaccaaccgtagtcctcaggccaacctgagt
cgcaccagctcggccgtccggcgctccaccgatgacctgccaacacgacgcgccggcagc
ctgggaggcctgcatcacgcgcagagccgcagcatgaacgacatttcggaaacgcccagc
tccgaccagatgaggaacaaattcatgaagaagattccccgcgatgccgaggcgtccaac
gtgctgatcggcgaggtggattttctggacaagcctttcgtgtcctttgtgcgcttggct
caggccacgacgctgggcggcctcaccgaagtcccggtgcccaccaggttcctcttcatc
ctcctgggtcctccgggcaagaccaagtcgtacaacgagatcgggcgcgccatcgccacg
ctgatggtggacgagcttttcagcgacgtagcctacaaagcgcgggagcgcgaggacctt
atcgctggcttggacgagttcctggatgaggtcattgtgctgcccccgggagaatgggac
cccaaaatccgcatcgaaccccccaagaaggttccgtcggcggagatgaggaagtccgtg
ctgaacttgaacgagccgccggctcagaccaacggctcggccgggggggcggccggcggt
gacgacgagcaacttcccgtccagcacgcggtcggcgaagagctcaagtttactggcagg
ctcggcggcggcctgtggttggacgtgaagaggaagacgccgtggtactgcagcgacatc
tacgacggcttccacatccagagcgtctcggccgtgctcttcatctacttgggctgcatc
accaacgccatcaccttcggcggcctgctgggcgacgccaccgacaactaccagggcgtg
atggagagcttcctggggacggcgttggccggaagcgtcttctgtttgttcggcgggcag
ccgctcatcatcctcagctccaccggccccattctcatctttgagaagctcctctacgag
ttctgcaagaacaacagcgtggactacatggagctgcgcctgtggatcgggatccactcg
tgcctgcagtgcttggtcttggtgttgtccgacgccagctacatcatccagtacatgacc
cggttcacagaggaaggcttctccagcctcatctccttcatcttcatctccgacgccatc
aaaaagatggtgggcgccttcaagtattaccccatcaaccgctccttcaagcccgactat
gccacgtcctacaagtgcgactgtgtgcctccagaccagggtgagttctccttctgcagg
tcccaaagcgccgctcgcgcttcacgttcatcttttgtgttcctccctttctcgctggcg
gccacgtgccctgaacacgtgagtaccaatgtcagcgccgcttcctcagcgtcactttgc
ttctttgacgagagcggccgtaaggcggctcctctttctccacgcagatctcgccggcga
catctcagctcctctggccgacgacaacgcgtcgcttccgttcaacgccagcgatctgga
ctggactcggctgagcaagacggagtgcgtggagtacggcggtgccctggtgggcaaagc
gtgcaagtacgtgcccgatctggccctcatgtccttcatcctcttcttcggcacctactc
catgaccgtggcgctcaagaagttcaagttcagccgctacttccccaccaagctgcgtca
gctgatcagcgactttgccatcgttatctccatccttcttttctgcggactggacgcctt
tctgggcctggacacggccaaactgcacattcccatgcacatcaagcccacgcgcgccga
ccgcggctggttggtgatgccgttcgggaggaatccgtggtggtggtacctggccagctt
cgtgccggcgctgctggtcaccatcctgatcttcatggaccagcagatcagcgccgtcat
cgtcaaccgcaaggagaacaaactcaagaaaggttgcgggtaccacctggacctgttctg
ggtgggcatcctgatggccgtgtgctccttcatggggctgccgtggtacgtggccgccac
cgtcatctccatcgcgcacatagactcgctcaagatggagagcgagtccagcgcccccgg
ggagcagccccagttcctgggggtccgcgagcagaggctgaccggaattctggtctttgt
cctcacgggactttctgtgttcctcgcccccgtcctgcagtacatccccatgccggtgct
gtacggcgtcttcctctacatgggcgtggcttcgctcagcgggatccagttctgggagcg
catcaagttgtacctgatgccgcccaagcaccagccggactttgccttcctgcgtcatgt
ccctctgcgccgagtccaccttttcaccctggtccagatcacctgcctggccatcctctg
ggtcctcaagtccaccttcctggccatcatcttccccgtgatgtctccctcagccagcag
cagcagcagcagcagcagcagcagcaggagcagcacggccaccaatgggcttgctcacgc
acgacctggcctggctggacgacctcctgcccgacaaagacaagaaaaacgaagatgaca
agaaaaagaagaagaagaagaagaagaaaagcgccgccgaggcggagagtgacgaggagt
gttgctaacgttgctgcctgcagtttcttccgcttgcttctccctgagcacaacgccacg
gccttttgtctgcgctag
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