Syngnathus scovelli (Gulf pipefish): 125979477
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Entry
125979477 CDS
T08785
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03272
Virion - Hepatitis viruses
sscv04145
Phagosome
sscv04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125979477 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125979477 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125979477 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125979477 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125979477 (scarb1)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125979477 (scarb1)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125979477 (scarb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
125979477
NCBI-ProteinID:
XP_049593688
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Position
13:15506714..15512092
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AA seq
502 aa
AA seq
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MVTCKSQVAVGFLVAGVLALVFGTILAIVGPLIIDQQIVKNTVIDPQNQMTYRMWKDIPV
PFYMSVYFFHVLNPKEVLNGEKPMLEQRGPYVYRKRCQKDNITFHANNTVTYLEYRRYFF
EPGMSAGNESDVVTIPNMLVLGAAVMMENLPFALRLMISATFKSFKEGPFLTKTVGELMW
GYDSGLVDFLNKYLPGTLPSSGKFGLFSEFNNSNTGLFTVFTGQDDIGNVHRVDSWNGLT
ELSYWRTPQCNMINGTAGQMWPPFMTRDSTLAFYSPDACRSMELVYQRAGSMKGIPLYRY
VAPKTLFANGSDYAPNQGFCPCRQSGLLNVSSCRHNSPVFISHPHFFNADPVLLDFVHGL
QPTEDQHGLFIDIHPQTGVPLNVSIRLQLNLYVKRVSGITETGKIPETVMPMIWFEESGY
MDGHVLDTFHTNLVVLPAVMEVTQYGFITLGLVTAAVAAIVWHRSRKEPCQDLAHGNGAP
QKSKRGDSGLQTHVWRIWAEEN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtgcaaaagccaagtggcggtgggcttcttggtcgcgggggttctcgcgctg
gtgtttgggaccatcctggccatcgtgggtccgctcatcatcgaccagcagatcgtcaag
aacacggtgatcgacccgcagaaccagatgacgtaccgcatgtggaaggacatcccggtg
ccgttctacatgtccgtctacttcttccacgtcctcaaccccaaggaggtcctgaacggc
gagaagcccatgctggagcagcgaggcccttacgtgtacaggaagcgctgccaaaaggac
aacatcacgttccacgccaacaacacggtgacttacctagagtaccggcgctacttcttt
gagcccggcatgtcggccggaaacgagtccgacgtggtcaccatccccaacatgctggtg
ctgggcgcggcggtgatgatggagaacctcccgtttgccttgcgactgatgatcagcgcc
accttcaagtcgttcaaggagggccccttcctcaccaagacggtgggcgagctcatgtgg
ggctacgacagcggcctggtggacttcctcaacaagtacctgcccgggacgctgccctcc
tccggcaagtttggactcttcagcgagttcaacaactccaacacgggcctgttcaccgtc
ttcacgggtcaggacgacattggcaacgtgcacagggtggactcctggaacggcctcact
gagctgagctactggcggacacctcagtgcaacatgatcaacggcacggcgggtcagatg
tggccgcccttcatgacccgagactccacgctggccttctacagccccgacgcgtgcagg
tccatggagctggtgtaccaacgggcgggcagcatgaagggcatccccttgtaccgctac
gtggcgcccaagacgctcttcgccaatggcagcgactacgcccccaaccagggattctgc
ccttgccgccagtcgggtctgctcaacgtcagcagctgccgccacaattctcccgtcttc
atttcgcatccgcacttcttcaacgccgaccctgtcctgctggactttgtgcacgggctc
cagcccaccgaggaccagcacgggctcttcatagacatccacccgcaaacgggcgtcccg
ctcaacgtgtccatccgcctgcagctcaacctttacgtcaagcgagtgtcaggaattacc
gagacgggcaagatccccgagaccgtcatgcccatgatctggtttgaggagagcggctac
atggacgggcacgtcctggacaccttccataccaacctggtggtgctgcccgctgtcatg
gaggtcacgcagtacggcttcatcacgctcggcctggtcactgccgccgtcgccgccatc
gtctggcacaggagccgcaaggagccctgccaagatctggctcacggcaatggcgccccg
cagaaaagcaagcggggagactcagggcttcaaacgcacgtgtggcgtatatgggcagaa
gaaaactaa
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