Syngnathus scovelli (Gulf pipefish): 125979488
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Entry
125979488 CDS
T08785
Name
(RefSeq) dynein axonemal assembly factor 1 homolog
KO
K19750
dynein axonemal assembly factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125979488
04812 Cytoskeleton proteins [BR:
sscv04812
]
125979488
Cilium and associated proteins [BR:
sscv03037
]
Motile cilia and associated proteins
Dynein assembly factors
125979488
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
125979488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
125979488
NCBI-ProteinID:
XP_049593715
LinkDB
All DBs
Position
1:complement(21364007..21368637)
Genome browser
AA seq
1454 aa
AA seq
DB search
MEKAASTPIKVGALKSNENILLKKFAGPRMTKEFLKNHCKQNRLYCTPYLNDTLYLHFKG
FSIIENLEEYTGLKCLWLESNGLQRIENLDAQINLRCLFLQQNLIHKLENLAPMQKLCSL
NVSNNYINTIENISCLPQLSTLQIAHNKLEVVHDIQHLSKCVALTVLDLSHNLLHEPGIL
PILEAMPELRVLNLIGNKVVSMIPNYRKTLIVRLRHLTFLDDRPVFPRDRACAEAWALGG
LELERKEREQWDTQDRKKIQESLDALALIKKKAQRRRRLREEAERGDSEASTTSSCEESA
SENIQSFVQDTLNAHDEFHQSQTKRNKTQQDKDSDLEQLDEGLLLGNEARRELFTRVNHD
DLKLPSVRVASEKYSPGLLEARLVAEELLQIEDLPALENVEPLVDNIQSFVQNPLEANEG
FLQGHTIPQAEENQEKGEDYKSKQLEEYVENDNQHKMSKTDIEHAQRGDNEQEQDLVFKE
RRESITILNPEQKLSSVKVDSLEEPSVLEDSVFLHLDDILDDFKPDAEKIGSLLHNTLKA
HEENVQNQTIPQADKGHEKGEDSKEKPDGALEAKEMSEVEEHDENAWQVGQDEGQVLDNE
AGRGPTTIITPQCQHIQLPLETCSPEELQDLSSLLTGLQNTESRNIDDHVEHVKSRAENI
PVEETLEASEQFLQIQTILEPDEMKEKDKDSKLVQLCGLEIRNKEELPEEQKKAQLVDVE
EDHVLANKTRRESSIFVNSEPQEEHTDHNPYLEDVEPTIEGSNRLVQETLEDSHQSQTRL
LHIDHPILEDVKPPTDIIQGFVQDTRQDDEKVSESQTTEPSDEDKDSKSEQFDKGLETRA
EDDSCEKQSQQADGDNHVLCDEVLLEPIIFLDNEHQETLLHSVVVEYPEGPQDPCLEGTR
QPNEILFCIDNRPDLEDVESTAVTIKCLVQDTLEVHDDFLQREIPKSNENLEKDIATKSK
QLDKELAIRTQEFMSGEQKEHVQEADGEKNHVLDDAITAEPTTIVNHEHKENQLPSVKVE
PSEEPLRTQVEDGVSLHTDCLNLGNIKPLSTDIRSYEFLQSQTTQQSDENQKNWSEGLEI
EINDQMSEDDKKQVWQVDTGKDLLLVDEIRQIEQPEHQDEHFSTVWIDYSEGWQDAVPLC
IDDILLEDMQPSSKTIQSFVKDTLLEAQEEILQSQTFQSIENQENNNDSEAEHQGVDTEA
GLEMIEELGEQAQKADGKGAQILSGEVGREPTVIINSQHWESQLLSAMADLLEEPQSSET
QGKASLSIDDILLEYVQPPSENIHSLLRYTPEVHETIPCIEEFKSEMEVEMKYMISGDKE
EKTQHMDKGEIQETELLLMTFDSEEPHSLGLQGPGLDGVESFPLEFLEMSFPQQVFKAKV
LLEDGCEAGSVWRDILTCGPDNKSLFLMSGSSKSLEPPHDSSLLYPEDVENPLDVELEEN
SNVIQSRCLIVELE
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcagcttccacgccaataaaagtcggtgctttgaaaagcaacgaaaatatt
ttgttgaaaaaatttgccgggccacggatgaccaaggagttcctgaagaatcactgcaag
caaaacaggctctactgcacgccgtatttaaacgacacgctctaccttcactttaaggga
ttctccatcatcgagaacttggaggagtacactgggctcaagtgtctatggctcgagagt
aatgggctacagcgcattgaaaacttggatgcgcagatcaatctgcgctgcctgttcctg
cagcagaacctgatccataaactggagaacctagcgcccatgcagaaactatgctccctc
aatgtctccaacaactacatcaacaccatcgagaacatctcctgccttcctcagcttagc
accctgcagattgcccacaacaagctggaggtggtccatgacatccagcacctaagcaaa
tgcgttgcactcacagttctggacctatcccacaacctgctccatgagccagggattctc
cccatcttggaggccatgcctgaactccgcgtcttgaatttgataggcaacaaggtggtg
agcatgattcccaactataggaagacactaatcgtccgccttaggcatctcaccttcctg
gacgaccggcccgtctttcctagggacagagcctgtgccgaggcctgggccctgggtggt
ctcgaattggaacgcaaggagagggagcaatgggacacccaggaccggaagaaaatacag
gagagcttggatgctttggctttgattaagaagaaagcacagcggagacggcgccttaga
gaggaagcggagcgaggtgactctgaggcatccaccacttcctcatgtgaggaatcggct
tcagagaacatccaaagttttgtacaggacacactaaatgcccacgatgagttccaccaa
agtcaaacaaaacgcaataaaacccagcaagataaggactcagacttggagcagcttgat
gaagggctgcttcttggcaatgaagcacgaagggaactttttactagagtaaaccatgac
gacctgaagcttccttcggttagggtagcttctgaaaaatatagtcccggtcttttagag
gctagactggtggctgaagagctgctgcaaattgaagaccttcctgctcttgaaaatgtg
gaaccgcttgttgacaacatccagagctttgtacagaacccattggaagccaacgaaggg
tttctccaaggccatacaatcccacaagctgaggaaaaccaggaaaagggcgaagattat
aaatcaaaacagcttgaagaatacgtagagaatgacaatcaacataaaatgtccaagaca
gatatagaacatgcacagcgaggtgataatgagcaggagcaggatcttgtctttaaagaa
cgaagagaatctattacaattttaaacccagagcagaagctctcttccgtgaaagtagat
tcccttgaagagccaagtgttctggaggattctgtgttccttcatcttgatgatattctt
gatgatttcaaaccagatgctgagaagattgggagccttctacacaacactttgaaggcc
catgaggagaacgtccaaaatcaaaccataccgcaggctgataaaggccatgaaaaaggt
gaagactccaaagagaagcccgatggagcactggaggccaaagagatgtctgaggtagag
gaacatgatgaaaatgcttggcaggtgggtcaagatgaaggtcaggtccttgacaatgaa
gcaggaagaggacctaccacaattataaccccccagtgccagcatattcagcttcctttg
gagacatgttctcctgaagaactgcaagatctaagttcacttttgacagggctgcagaat
acagagtcacggaatattgatgatcatgttgagcatgtcaaatcacgtgctgagaacatc
cctgttgaggaaacattggaggccagtgagcagtttctccagattcaaacaatactggaa
cctgatgaaatgaaggaaaaagacaaagattccaaattagtgcagctttgtggtttggag
atcagaaataaagaagagttgcctgaagaacagaaaaaagctcaattggtggatgtagag
gaggatcacgttcttgcaaataaaacaagaagagaatctagtatatttgtcaactctgag
ccccaggaggaacatactgatcataatccttatcttgaagatgtggaaccaactattgag
ggcagcaatagacttgtgcaggagacacttgaggatagtcaccaaagtcaaacaagacta
ctgcacattgatcatcctattcttgaggatgtcaaaccacctacagacatcattcaaggt
tttgttcaggacacacgacaggacgacgagaaggtttctgaaagtcaaacaacagagcca
tctgatgaagacaaagactccaaatcagagcagtttgataaaggattagagaccagagct
gaagatgattcatgtgaaaaacaatctcagcaggcggatggagataatcatgttctttgt
gatgaagtattattagaacctataatatttctagacaatgagcatcaggagacattgctt
cattcagtagtggtggaataccctgaagggccacaagatccctgtctagaggggaccaga
caaccaaatgaaattctgttttgtattgataatcgtcctgatcttgaggatgtagaatca
acagctgtgaccatcaaatgtcttgtgcaggacacattggaagtccatgatgactttctc
caaagggaaataccgaaatccaatgaaaacctggaaaaggatatagcgaccaagtccaag
cagcttgacaaagaattggcaattagaactcaagagttcatgtctggagaacagaaagaa
catgttcaagaagcggatggagagaagaaccatgttcttgatgatgcaataacagcagaa
cctacaacaattgttaatcatgaacataaggagaaccagcttccttctgtgaaggttgaa
ccttctgaagagccactcaggacccaagttgaggatggagtctcactgcatactgattgt
ctcaatcttgggaatataaaaccgctttccacggacatccgtagctatgagtttcttcaa
agtcaaacaacacagcaatccgatgaaaaccagaaaaactggagtgaaggattggagatt
gagataaatgatcaaatgtccgaggatgataaaaagcaggtttggcaggtggatacaggg
aaggatcttcttctcgtggatgaaataagacaaatcgagcaaccagagcaccaggatgag
catttttccacagtgtggattgactattctgaggggtggcaggatgcagtgccgctctgc
attgatgatattcttcttgaggatatgcaaccatccagtaaaactattcaaagttttgtg
aaggacacactcttggaggcccaagaggagatactccaaagtcaaacatttcaatctatt
gaaaaccaagaaaacaataacgactctgaagcagagcatcaaggtgtagatacggaggct
ggactagagatgattgaagaacttggagaacaagctcagaaggctgatggaaaaggagct
cagattctttccggtgaagtgggaagagaacctacagtaattataaactctcagcactgg
gaaagccaacttctttcagcgatggcagatcttcttgaagaaccacaaagttctgaaacg
cagggtaaagcatcactttccattgatgacattcttcttgaatatgtgcaaccaccctca
gagaacatccacagccttttgcggtacacaccggaggtccatgaaacaataccatgtatc
gaagagttcaagtctgaaatggaggttgagatgaaatatatgatttctggggacaaggaa
gaaaagacccaacatatggataaaggggaaatccaagagactgaacttctcttgatgacg
tttgattctgaggaaccacatagcctaggtctccagggacctggactggacggtgtagag
tcgttcccccttgagtttttagaaatgtccttccctcaacaggtgttcaaagcaaaagtt
ctattagaagatggttgtgaagctggatcagtctggagagacatcctcacttgtggtcca
gataataaatcattgtttttaatgtctggctcctccaagtcactagaaccaccgcatgat
tcatctctgctgtatccagaggatgttgagaaccctttagatgtggaactagaggaaaat
tccaacgtcatccaatcccgctgtttgattgtggagctggaatga
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integrated database retrieval system
