Syngnathus scovelli (Gulf pipefish): 125979522
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Entry
125979522 CDS
T08785
Name
(RefSeq) dynein axonemal intermediate chain 2-like isoform X1
KO
K11143
dynein axonemal intermediate chain 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125979522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125979522
04812 Cytoskeleton proteins [BR:
sscv04812
]
125979522
Cilium and associated proteins [BR:
sscv03037
]
Motile cilia and associated proteins
Dynein arm
125979522
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125979522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_SCAP
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
125979522
NCBI-ProteinID:
XP_049593796
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All DBs
Position
13:12997023..13000689
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AA seq
577 aa
AA seq
DB search
MEIVHEYAKVRSDFGRQCLFSDRHVEMLVDMPPNPKLASQFVLKTTRDLGVQGCYEMSEH
EVNTDRFEHENQGINHVEGGWPKDINSLEMEQTIRFKKKVEKDEIYMNSVLELGELIGQC
VGQNNAVDIYQEYFKNEELLDELQEVPSIEIVNKYRDRSKVKRSITCFSWQPKGGAILAA
AYSCLDPRKFTADMSKDSYIWDIGGSNGRIENHTRQSVDNHLCFPESPNYPQAVLQATSQ
LVCLTYNPQDLNTLVSGCRNGQIMLWDARNGHQATGVSPLEESHTDPVYKAIWLESDEAF
SASTDGQILWWDVRHLSKPIERLILDIKRKDDLDNALGAISLDYTATSPNMFIVGTEQGA
VLSCKRTAEIPTERIICTYDGHHGPVYALQRNPFFPQNFLTVGDWGARIWSDEIKETAIM
WTKHQNANLTDACWSPVRPSVFVTVNMDGWLDIWDILFKQNDPTISFKVREEPVCTVKVH
EAGSKVACGSQLGVISLMKISEGLCTEQNNEQDLLSEILEREAKREKVLKAQRGGDEGET
DDQTLKELILKPEYDFYNLLDSEQRRKQWESRQRHYK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtccatgaatacgcgaaggtccgcagtgacttcggccgtcagtgtctcttt
tcagatcgtcatgtggagatgctcgtcgatatgcctcccaacccaaagctggcatcgcag
ttcgtcctgaagacgacaagagacctaggagtgcaaggctgctatgaaatgtctgagcat
gaggtaaacacagatagatttgagcatgaaaaccagggaataaatcacgtggaaggaggc
tggcccaaagatatcaactcacttgagatggaacaaactattcgttttaaaaagaaggtg
gagaaagatgaaatttacatgaatagcgtcctggagctcggcgagcttataggacaatgt
gttggacagaacaacgctgtggacatctaccaagagtactttaagaatgaggaattgttg
gatgagcttcaggaggtcccttctatcgagattgtcaataaatacagagaccgcagcaag
gttaaacgaagcatcacctgtttttcttggcaacctaaaggaggcgcaatactagcagct
gcttactcctgcctcgacccacggaaatttacagcagatatgagtaaagactcatacatc
tgggacattggtgggtcaaatggacggattgaaaatcacacacgacaatctgttgataac
catctctgctttccagagagccccaactaccctcaggctgttctccaagcgacgtctcaa
ctcgtatgtctgacttacaaccctcaagacttgaacactcttgtcagcgggtgccgcaat
ggacagattatgttatgggatgcccgtaatggccatcaagctacaggggtttcccctttg
gaggagagtcacacagatcctgtttacaaagcgatctggttggaatctgatgaagccttc
tctgcatctacagatggacagattctgtggtgggacgttcgccacctgagcaagcccata
gaacggctgattctagacatcaaaaggaaggacgacctcgataacgctttaggagccatt
tctctggactacaccgctacctcgccaaacatgttcatagtggggacagaacagggggca
gttttgtcctgtaaaaggaccgctgagattccgactgagaggatcatatgtacatacgat
ggccaccatggacctgtctatgccctccagaggaaccctttctttccccagaacttccta
actgtgggagactggggggcccgaatttggtcagatgaaatcaaggagacagcaatcatg
tggacaaagcaccagaatgcaaatctaacagatgcctgctggagtcctgtcagaccctcg
gtcttcgtcaccgtgaatatggatggatggctggacatctgggacatcttgtttaagcag
aacgaccccacgattagttttaaggtgcgggaagaacctgtgtgtaccgtcaaggtgcat
gaggctgggtccaaggtggcttgtggttctcagctgggtgtcatctcgctcatgaaaatc
tccgaaggactgtgcaccgaacagaacaatgagcaggacctcctgagcgaaatattagaa
cgtgaggcgaagcgcgaaaaggtcctcaaggctcagagaggaggggacgagggcgagacc
gacgatcaaactctcaaggagctgatcctgaaacctgagtatgacttctacaatctgttg
gactcggagcagaggaggaagcaatgggagtccagacagcggcattacaaatag
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