Syngnathus scovelli (Gulf pipefish): 125979556
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Entry
125979556 CDS
T08785
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125979556 (slitrk2)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_9
LRRCT
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125979556
NCBI-ProteinID:
XP_049593862
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Position
1:complement(19592902..19597272)
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AA seq
882 aa
AA seq
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MLSGVLFLSVLTVTSLSPSETESRKTSASKDICKIRCACEERENILNINCENKGFTTVSQ
FQAPPNKISQLFLNGNFLSRIGANEFVNYGNVTSLHLGNNGLQEIGSNAFLGLRFLKRLH
LNNNNLEGIKEDMFAGLESMEYLQADYNYISTIEPGAFSKLNKLKVLILNDNLLLSLPPN
IFRFVLLTHLDLRGNRLKTLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISV
FVGDIVCETPFRLHGKDITQLIKQDLCPRRNAGERAHPASDSHFQGALPATYLPGMISPT
RLPKASRPPKMRYRPTPRIAKDKHVFGPIMVYQTRSPVPILCPSVCVCTSQNPDSGLNIN
CQERKLHNISELNPKPSYPKKLHLTGNYLQVIYRPDLTEYSLLELLHLGNNRIAVIQEGA
FENLTNLRRLYLNGNYIESLSQSLFAGLQSLQYLYLEYNVIKDILPQTFNALHNLQLLFL
NNNLLRSLPDNVFGGTMLTRLNLRNNHFSYLPVKGVLDQLSAFIQIDLQENPWDCTCHIV
ALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPEPSQEPPPQYAPPTKAPTF
VSPSTESPTPSSSSAFSSVRPTESRLQTPELHPEVPLSVLILGLLIVFILSVCFGAGLFV
FVLKRRKGVEHVPTGSNNIDLNSFQVQYGSYNPEPTQDKNSQSHVYNYIPPPVGSMCQNP
IYIQKDGEQVAFYRNLKELSFGPLNAKKDDILTRSPGAFTIGAVDFKDKSPTSPPEMLYQ
NVGERPNKELPTAAGTSPFSYNFCTLPKRPCIVPPYEAATAPRHVTNQDRLSKTVVYGTP
RKCFGVELPSKNSEHQFLLHGKLKTEPDYLEVLEKHTAMSQL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggtgtcctctttctgagcgtcctcacggtcaccagcctgtcgccatctgag
acggagagccgcaaaacttcagcctccaaagatatctgcaagatccgctgcgcctgcgag
gagagagagaacattttgaatattaactgtgagaataaaggatttaccaccgtcagccag
ttccaggcacccccaaataagatctcgcagctttttctaaatgggaacttcctgtctcgt
attggtgcaaatgagtttgtcaattatggcaatgtcacctctctgcatctgggcaataat
ggattacaggagatcgggagcaatgcttttcttgggctgcgcttcttaaagaggctgcac
ttgaataacaacaacctggaggggataaaggaggacatgtttgcgggactcgagagtatg
gagtatttacaggcagattataattatatcagcaccattgaaccaggcgctttcagtaag
ctgaacaagcttaaagtcttgattctcaatgacaacctcctgttgtctttgcctccaaat
atcttccgcttcgtgctccttacccatttggatttacgtggcaacaggctcaagactttg
ccctttgcaggggttctggagcacattggtgggatcatggagatccagctggaagaaaac
ccgtggaattgtacttgtgatttgattcctctaaaatcctggttggacactatttcagtc
tttgtgggggacattgtatgcgagacgccattcaggctccacggtaaagacatcacacag
ctgataaagcaggatctgtgcccacgcagaaatgctggcgagcgtgctcaccctgcctct
gactctcacttccaaggggcgctgcccgcaacctacctccccggcatgatctcccccacc
cgtctccctaaagcctcacgaccccctaaaatgcgctaccggcccactccccgcatcgca
aaggacaaacacgtctttgggcctataatggtttaccagacacgctcgcctgtgcctatt
ttgtgccccagtgtgtgcgtgtgcacatcccaaaacccggacagtgggctgaacatcaac
tgtcaagagcggaagttgcataacatcagtgagttgaaccccaagccctcgtacccaaag
aaactgcacctgaccggtaactaccttcaagtgatctacagacctgatctgacggagtac
agtctgctggagctgcttcatttaggaaataaccggatcgcggtgattcaggaaggcgca
tttgagaacctgacaaatctgaggcggctctatctgaacgggaattacatcgagtcactt
tcgcaatcgctttttgccggcctgcaatcgctccagtatctgtatttggaatacaatgtc
atcaaagacattttaccgcagaccttcaatgctttacataaccttcagctgcttttcctc
aacaataacctcctgagatcactgcctgacaacgtcttcgggggcaccatgctaacacga
ctcaacttacggaataatcacttctcctatctgcccgttaagggtgtgcttgaccagtta
tcggcatttatccagattgacctccaggagaacccctgggactgcacctgtcacattgtt
gcactcaaaaactggatggagctgtccagcaccagtgtcgtggttaatgaaatcacttgt
gactcaccctctaagcacgctggtcgcctgctgcgctcactgcgcaatgaggccatctgt
cccgagccaagccaagagcccccacctcaatatgccccccctaccaaagccccgacattt
gtgagtcccagcactgagtcaccaacaccctcttcctcctctgctttcagctcagtcaga
cccactgaatcccgactgcaaacccctgagctgcatccagaagtcccgctttcagttctc
attctagggcttcttattgttttcatcctgtcagtctgttttggagcagggctctttgtc
tttgttctgaaacgacgcaaaggggtggaacatgtcccaacgggctctaacaatatagat
ctgaactcattccaagtgcagtatggctcctacaatccagaaccaacccaagataaaaat
tcccaaagtcatgtgtataattacatccccccacccgtgggttccatgtgccaaaaccca
atttacatacagaaagatggcgagcaggtggcattttaccgtaacctcaaggagctaagc
tttgggcctctgaatgcgaagaaagatgatattcttacacggagcccaggcgcttttacc
atcggcgcagtggatttcaaggacaaatcgccaacatcgccgccggagatgttatatcaa
aatgtaggcgagaggcccaacaaggagcttccaacagctgctggcacctcgcccttcagt
tacaatttctgcactttacccaagagaccttgcatcgtgcccccctacgaggctgccaca
gccccgcgacatgtcaccaaccaagacaggttaagcaaaactgtggtgtacggaaccccc
aggaaatgctttggggtcgagctcccttccaaaaacagtgagcaccaatttcttcttcat
gggaagctaaaaacagaaccggactatctggaagttctggagaaacacactgctatgagc
cagctgtaa
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