Syngnathus scovelli (Gulf pipefish): 125979560
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Entry
125979560 CDS
T08785
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sscv01100
Metabolic pathways
Module
sscv_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125979560 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125979560 (csgalnact1a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
125979560 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125979560 (csgalnact1a)
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
O-Glycan
125979560 (csgalnact1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Csm1_N
DUF4407
Motif
Other DBs
NCBI-GeneID:
125979560
NCBI-ProteinID:
XP_049593865
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All DBs
Position
13:complement(11732251..11741757)
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AA seq
565 aa
AA seq
DB search
MPAMLRRRLLAWVSRVGAVLVLLCCSLTLFYVMTCSTLHPDDSSPSRVLPRALPRASTNQ
VDLGGTRPGGAAQSGGPPVIHSYQELLQEREEQHRLHISSLKKQIAQLKEALQERSQQLK
GVQDSLKKAVAGGPAEGRNSQPGDLGEAPGAKNQQADLQNFLRSQISKAEVTAGARQQSE
YSVVPFESFTLHRVYQLEMGLTRHPEEKPVRKDKQDELGEVLEFSLHNLNAPLAQPAGKS
SKVYSRSDFIEGITRTEKDKGTVYDLTFRGEASREFRRLVLFRPFGPLMKVRSERVDTAD
VLINIVMPLSQRTERFRQFMQNFREVCVQQDGRVHLTVVYFGKEQMSEVRHILENTSREA
NFKNYTLLQLDEEFSRGRGLDVGAQAWRGGDVLLFFCDVDIHFTADFLGSCRLNAESGKK
VFYPVLFSQYNPKLIYGSPENIPPVEQQLVLKKDTGFWRDFGFGMTCQYRSDFIHIGGFD
IDIKGWGGEDVHLYRKYLRSSILVVRAPSRDLFHLWHDKHCADELAPDQYRMCIKSKAMN
EASHGQLGMLFFHKDIEAHLSKQKT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatgttgcggcgtaggctcctagcctgggtgtcgcgggtcggcgccgtgttg
gttcttctgtgttgctccttgacgctcttctacgtgatgacctgcagcacgctgcacccg
gacgactcgtcgccgagtcgcgtcttaccgcgcgctttaccgcgcgctagcaccaaccag
gtcgacctgggcggtacgaggcccggaggtgctgcccaaagcgggggaccgccggtgatc
cactcctaccaggagctactgcaagagcgtgaggagcaacaccgcctgcatatctcctcg
ctgaagaaacagattgctcagcttaaagaggcgctgcaggaacgcagccaacagctcaaa
ggtgtgcaagacagcctgaagaaggccgtcgccgggggaccggctgaggggcgcaactcg
cagcccggggacctcggggaagccccgggagccaaaaaccagcaggcggacctccagaac
ttcttaaggagccagatctccaaagccgaagtgaccgccggggctaggcaacaaagcgag
tactcggtggtgccctttgagagcttcaccctgcaccgagtctaccagcttgaaatgggt
ctgacccgacaccccgaggagaaacctgtgaggaaggacaagcaggacgagctgggcgaa
gtgctggagttctccctgcacaacctcaacgccccgctggcgcagccggccggcaaaagt
agcaaagtctactcgcggtcggactttatagaaggcatcacgcgtacagagaaggacaaa
ggcacagtgtacgatctgactttccgcggggaagccagtcgggaattccgccgcctggtc
cttttccggccctttggaccactgatgaaggtgaggagcgagcgggtggacacggccgac
gtgctcatcaacattgtgatgccgctgtcgcaacgtaccgaaaggttcaggcagttcatg
cagaacttcagggaggtctgcgtgcagcaggacggccgcgtccacctcacggtggtctat
ttcgggaaggagcagatgagcgaggtccgccacatcctagagaacacatccagggaggcc
aacttcaaaaactacactctcctgcagctggacgaggagttctcccgaggtcgtggtctg
gatgtcggggcgcaggcatggaggggcggcgacgtgctgctcttcttctgtgacgtcgat
atccacttcaccgccgacttcctgggatcttgccgactcaatgccgagtctggtaaaaag
gtcttctacccagtgttgttcagccagtacaaccccaaactgatctacgggagtcctgag
aacatcccgccagtggagcaacagctggtgctgaagaaagacacgggcttctggagagat
ttcggattcggcatgacctgccagtaccgctcggacttcatccatataggtggttttgac
attgatataaagggttggggaggagaggacgtgcacttgtatcgcaagtacctgagaagt
agtattctggtggtgcgggctccgtcacgcgacctcttccacctgtggcacgacaagcac
tgcgcagacgagttggcacccgatcagtaccggatgtgcataaaatccaaggccatgaac
gaggcgtcgcacggacagttggggatgctcttcttccataaagacattgaggcgcaccta
agcaagcagaagacgtaa
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