Syngnathus scovelli (Gulf pipefish): 125979571
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Entry
125979571 CDS
T08785
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125979571 (kcmf1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125979571 (kcmf1)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125979571 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
TFIIA
Zn_SUZ12
Fic_N
Motif
Other DBs
NCBI-GeneID:
125979571
NCBI-ProteinID:
XP_049593894
LinkDB
All DBs
Position
13:complement(11672361..11677749)
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AA seq
395 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCALCYESGATTTRHTTEHPMQCILTRID
YDLYYGGDTFSLEQHQAFTCPYCGKMGFTETSLQEHVTAEHPETSTEVICPICAALPGGD
PNHVTDDLPAHLTLEHRAPRELDESSSVRHVRRMFHPGRGLGGTRARRTNMHFTGGSAGG
LSSTTSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQ
LERQQAQAARQQAETGRHAARRGNNPGNTTNSATAAILPPSAAATNTIAPAESNHSSLSH
NSQFLLARLNEPKMTEAERQLAEGERADRSLFVQELLLSTLMRDESSSSDEDERRDFADF
GAMGCVDVMPLDVALEHLQLRERASAAKEPPPPPL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgagggtgtgagctgcgacgcttgtttgaagggaaactttcggggaaga
cgcttcaagtgtctcatctgctacgactacgacctttgcgccttgtgctacgagagcggc
gccaccaccacgcgacacaccacagagcaccccatgcagtgtatattaaccaggatagac
tacgatttgtattatggcggcgacaccttctcgctggagcagcaccaggcattcacgtgt
ccttactgcggcaagatgggcttcacggagacatctttgcaggagcacgtcaccgccgag
cacccagagacctccaccgaggtgatctgtccaatatgcgcagccttgcccggtggggat
cccaaccacgtcacagatgacttgccagcccacctcactcttgagcacagagcacccaga
gagttagacgagtccagcagcgtccggcacgtgcggcggatgttccaccccggccgggga
ctgggcggcacccgagcgcgacgcaccaacatgcactttaccggcggctccgccggcggt
ctgtcctcaactacgtcgtcatcacagagctccacctacacgcccagcaacagggaggcc
atggaccccattgcagagttgttgtcacagctgtcaggcgtgcggcgcgcggcgggcggc
cagatcaactcatcggggccatcggcctcgcagttgcagcaactccagatgcagctgcag
ctagagcggcagcaggcgcaagcggcccgccagcaggcggagacgggccgccacgccgcc
cggcgcggtaacaatccgggcaataccaccaactcggccaccgccgccatcctgccgcct
agcgcggccgccaccaacacgattgcgccggccgagagcaaccactcgtccttgtcccac
aattctcagtttctattagcacggctgaacgagcccaagatgaccgaggcggagcgtcag
ctggcggagggcgagcgcgccgaccgcagcctgtttgtgcaggagctgctgctgtccacg
ctcatgcgtgacgagagctcgtcgtccgacgaggatgagcggcgggacttcgccgacttt
ggcgccatgggctgcgtggacgtcatgccgcttgacgtggcgctggagcacctgcagctc
cgtgaaagagcctccgccgccaaggagcctccgccgccgcctctttga
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