Syngnathus scovelli (Gulf pipefish): 125979631
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Entry
125979631 CDS
T08785
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125979631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125979631
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
125979631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
125979631
NCBI-ProteinID:
XP_049594004
LinkDB
All DBs
Position
13:complement(10973295..10987654)
Genome browser
AA seq
2749 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVNSLLVCRDDN
LVTQLAHGLNQVSTEHIELKDNLGNDEPEGDMPVLLQALLSRNPKIFRDKSVIQQPAVQQ
YKISPNQVHRSPAPNYQQSPVTQRTSGCFSSPQSGSGARFISQQQHSNSPIPSPYTPQSP
ADYMQYSPPSYSQHQQTQQVGGNLRNLHHKVSGQLSSNTSNHHAKAGSDDDYVNIAHRLG
NEENEHSMMAALFPVKSPQSVCSPDENEPSKWSRSLLIMQSPPSDVPPSMAPNMLLSSTE
RKKKQKQRSKAADEHLEKNALYDIVSTPVKDSARLTLKLSRVKNAHKEQYEVYSPRKDAT
PQACLTNSKNTILNSNQDSPCKFPAEESPNCQQVPFQPNETTAAVSAVVLLDDAEADIEA
LAEIERTERESGSERERWSKEVQDKDKPLKKRKQDSYPQEPGVDLTDGFAVQGGNQITPK
KKNAASNGSGRPALMVSIDLQQAGRGLRQPIVVLEAKQVLGSDSETEAEKDNTCQLTVSK
QLVDDSAKSDPDIRLKEKKESLRESKHRADGWCGDSPRPKQNRDPESRHREEKNDNGHCQ
PDSLKTSNKADRNADCYNEDKGREKKRTKDHDAEKVWSREKERDQDPDVGKEKEIDRNKI
RDKIKIRQKDTDRNKDKEKEMDGDRVRDREKERDVDRVRDCEKDRGRDKDQGKDRPKEKD
RIREKVRSKEKELDKQLDRDETRLKEKERDKDQDRQKDRLKEKERNKEADKEKNRFREKE
QDKERDRFKQEKERFKEKERNKEMDKEKDQLKEKDKTLEKERNREKARERVTGEGKERVR
EDKARKHKAAMSNSNKHEQSPDGTAKLDKEHKIRQDGSRHLSDLSARERTDKSNFLIPQN
KKERKGGDESKEPSQVKKNSEFEFPSYLLGGNSGALKNFVIPKVKRDTVEKCPAVSGDLL
DVWKEPRVVLERKSLVENLSKGPKPVVKVKRLNVDDIQSIKKELKEPDQLWNLSSSHKSK
DVKRRHSMISKSPKYTERSDEEKEASDDDNDNSEDEVMKKKRRKDQNKSWKRESKKGRQR
QQDWSSGESDGGAPPNLSDVARKLKKKHKERKAYEKMRPEDLMDTSTFKRFVASVDNILE
SLEDVDLTGAGDDGDDEIPEELLLGKHQLNELCSDSAKMKEMGIFYKCSSQKLVKFMNVL
EKNIQDSVKLSTLMNHGNDSMDEERLWRDLILERVTKSADACLTALNIMTSPRVPKVVFI
EDVIERVLQYTKYHMQNSLYPQYDPTYRLDPHGGGGHNSKGKKVKNSSHKQKTVLQLYGK
VCDIISNLSELVEIQLLTDNTILQVSTLGITPFFVENVSELQLCAINLVTAVFSRYRKHR
QLILEEIFNSMARLPSSKRNLRNFRLNSSDGGSKHIQMVTALVLQLIQCVVQLPSSKDGD
DEHNKKVDKDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEDDFRPLFENFVHDLLSTVN
KPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVASRLRKDAVSSKMDQKAI
DRILKEFPGNDETHQLQRALLCYIEESSEIDPALVFARNFYIAQWYRDITSEADKAMKSH
DDDDDPKALFAVNDVDSTEEIVQRAESRKKLLRKIIRNSHTRISSDAIDYRDSCLIVQYL
ASMRPFSQSFDVYLSQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARPDMQRGVHGRL
MDNSTSVREAAVELVGRFVLSRPELIEQYYDMLIERILDTGISVRKRVIKILRDICLELP
DFHKITEMCVKMIRRVNDEEGIKKLVNETFQKIWFTPTPSHDKDAMIRKILNITDVVLAC
KDSGYDWFEQLLQNLLKSEEAASYKPAKKACSQLVDNLVEHIVKYEDSIGECEDKGGNSG
RLVACVTTLYLFSKIRPQLMVKHAMTMQPHLNTKGNNQNDLMLICNVAKILELVVPLMDN
PSENFLTTIEEDLMKLIIKYGMMVVQHCVSCLGAVVNKVTHNYKFVWACFNRFYGALAKL
KTQHQEDPDSPTLVTNKPTLLRSLFTVGALCRHFDFDQEEFKGTNKLLIKDKVLEVLLYF
TSHKDEVVQVKALIGLGFQFIMHPELMFAQDVKILYNNILSDEHSLVSLKVQVLKNMQTY
LQEEDSRMLEADRDWKEKAKQEDLKEMGDISSGMSSSIIQIYLKQVLDSFLHAQSTVRHF
ALSVITLTLSQGLIHPVQCVPYLIAMGTDPEPTMKNKSDQQLVDIDKKYSGFIHMKAVAG
LKLSYQIQRAIAGSKEAIIRGFRHQDTDAALCAHLYTLVRGNRQHRRAFLISLLNMFDDS
SRAEVNLLLFVADNLACFPYQTQEEPLFIMHHVDITLSVSGSNLLQSFKESLRKGPIPRP
KKIKKKKKKKEKKAKPRKMRDSSDDSEESSSQSSSSSSSSSSSSSSSEEEVVEKLHTQSD
SDMDDEDVVMARLPEDQKPLLDFSLASQGILLLLMLKQHLKNLYGFSDSKIQKYSPTESA
KVYDKTVNRKSKVHFNPRQTLEFLKVGLSSSDISYETRKSIVKQYLHFKVLMDHLDREED
EEEGEASANARNKAITSLLQGPKYRNHNHNNHRAQIESEDEESEDEDPPAQKSRRGDDSA
EDYGHMNESVDVTDVVAICCPKYKDRPQIARVVQKTKSGYSVHWMSGTYSGPWVVAKKRD
GRKKVPWLDNIKEADIIYKKISLTSGQKLTNKVAQTLRALYAAKDGTKH
NT seq
8250 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactctcgccggaattgcaagcctcacg
gacctgttgaaccaacttccactaccttcacctctccctgccaccactgccaagagtctg
ctgtacaatggacgaatctccgaagaggtcaacagcctgttggtgtgccgcgacgacaac
ctggtaactcagctggcccacggcctcaaccaggtgtccacggaacacatagagctgaag
gacaacttggggaacgatgagcccgaaggtgacatgcctgtgctcctacaagctctgctg
tccagaaaccccaaaatattccgggacaaaagtgtaatccagcaaccagcagtacaacaa
tataagatttctccaaaccaggtccacaggagcccagcaccaaattatcagcagtcccca
gtgacgcagaggacttctggatgcttcagctcgccacagtctgggtccggagcccggttc
atatcacagcagcagcattcaaacagccccatccccagtccctatactcctcaaagtcct
gctgattacatgcaatacagtcctcccagttactcgcaacaccagcagacgcaacaagtt
ggcggtaatcttaggaatcttcaccacaaggtgtcaggacagctatcgagcaacacatcc
aatcatcatgccaaagcaggctcggatgacgactatgtcaacattgcgcacagacttggg
aatgaggaaaatgagcactccatgatggccgccttgtttccagtcaagtcaccgcaatct
gtgtgttccccggatgagaacgaaccatctaaatggtccagatctctgctcattatgcag
tcgcctccttccgacgtcccccccagcatggctcccaacatgctgctctcctccacggag
cgaaaaaagaagcagaagcaaaggagcaaggcggccgatgagcacctggagaaaaatgcc
ttgtatgacatagtgagcacccccgtgaaagactctgccaggctgacgttaaagctgtcc
agagtgaagaacgcacacaaagaacagtacgaagtgtattctcccaggaaggacgcgacg
ccgcaagcgtgcctgacgaacagtaaaaacaccatcctgaactctaaccaggactcgccg
tgcaaatttcccgcggaggagtcgccaaactgtcagcaagttccgtttcaaccaaacgag
accaccgctgccgtctcagcggtggtgctgctggatgacgccgaggccgacattgaggct
ttggcggagatcgagaggaccgaacgtgaatctggtagcgagagagagcgatggtccaaa
gaggtccaggataaagacaaaccgctgaaaaaacgaaagcaagactcataccctcaggaa
ccgggagtggacctgactgacggtttcgctgtacaaggcggcaaccagataacacccaag
aagaagaacgcggccagcaacggttccggtcgtcccgctctgatggtcagcattgatctg
cagcaggccggccgaggattacggcagcccatcgtggtgctcgaggccaagcaggtcctg
ggttctgattccgagacggaagcggagaaagataacacctgccaactgactgttagcaaa
cagctcgtcgatgactccgcaaagtccgacccggatatccgtctgaaggagaagaaggaa
agcctgcgggaatccaaacacagagccgacggatggtgcggagactcgccgaggcccaag
cagaatcgagacccggagtctcggcacagggaggaaaagaacgacaacggtcactgtcaa
cctgactccctgaaaacctccaacaaagcagaccggaacgccgattgttataacgaagac
aaaggtagggagaagaagaggacgaaagatcacgacgcggaaaaagtttggagtcgggaa
aaagagagggaccaagacccggatgtggggaaagaaaaagagatagacaggaataagatc
agagataaaatcaaaattcgacaaaaggatacagacagaaataaggataaagagaaggag
atggatggggatagagtccgagaccgggagaaggagagagacgttgacagagtgagagat
tgtgaaaaagatcgaggcagggataaggatcaaggtaaagatcgcccaaaggaaaaggac
agaatcagggagaaagttcgatctaaggagaaagagctggacaagcagctagacagggat
gaaactcgattaaaagagaaagagcgagataaggatcaagataggcagaaagatcggtta
aaggagaaggagcgaaataaggaggcggataaggagaaaaatcgattcagggagaaggag
caagataaggagagggatcgattcaaacaggagaaagagcgattcaaggagaaagagcga
aataaagagatggataaggagaaggaccaattaaaggagaaggacaaaactctggagaag
gagcgcaatagggagaaagctcgggaaagagtgacgggagaaggtaaggaaagagtcagg
gaggacaaggccaggaaacacaaagcggccatgagtaacagcaacaaacatgagcagtct
ccggatgggacggccaaactagacaaggagcacaaaatcaggcaagatggtagcagacac
ctcagtgacctcagcgctcgtgaaaggacagacaaatccaattttttgatcccgcaaaat
aaaaaagagaggaaaggcggcgatgaaagtaaagaaccctcccaggtgaaaaaaaacagc
gaatttgaatttccttcctacttactggggggaaactcaggagcgctcaagaactttgtc
atacccaaagtgaaacgggacaccgtggagaagtgtcccgccgtttcgggcgacttgctc
gatgtctggaaagaacctcgcgttgtactggagaggaagtcgctggtcgaaaacctcagc
aaaggcccgaaacctgttgtgaaagtgaaaaggctgaatgttgatgacatacaaagcatc
aagaaggaactcaaggaaccggaccagttgtggaatttgtcttctagtcacaaatcgaaa
gatgtcaagcggcggcacagtatgattagtaaatccccaaagtataccgaacgctccgat
gaagagaaggaagcaagcgatgatgacaacgacaactcggaggatgaagtgatgaaaaaa
aagagaaggaaagatcagaacaagtcgtggaagcgcgagtctaaaaaaggtcgccagcgg
caacaggactggagctcaggggaaagcgacggtggggcaccgccaaatttaagcgacgtg
gccagaaaattgaagaagaaacataaagagagaaaggcgtacgaaaagatgcgacctgag
gatttgatggacacgtccactttcaagagattcgtcgccagcgtggacaacatcttggag
agtcttgaagacgtggacctaactggcgcaggtgacgacggtgatgatgaaataccagag
gagttgctgctcggaaagcaccagttgaacgagttatgcagcgattcagccaagatgaaa
gagatgggcatcttttataagtgttcatctcagaaattggtgaaattcatgaacgtcctg
gagaagaacattcaggacagtgtcaaactgtccacgttgatgaaccatggtaacgactcc
atggacgaggagcggctgtggcgcgacctcatcttggagcgggtgaccaagtcggccgac
gcctgcctgacggcgctcaacatcatgacctcgccgcgcgtgcccaaggtggttttcatc
gaagacgtcatcgagcgggtgttgcagtacaccaagtaccacatgcagaactccttgtac
ccccagtacgaccccacctaccgattagatccccacggaggtggtgggcataattccaaa
ggcaagaaagttaaaaactccagccataagcaaaagacggtgctgcagctctacggcaaa
gtgtgtgacatcatcagcaacctttcggagctggtggagatccagctgctgaccgacaac
accattctccaggtgtccaccttgggtatcacgccgtttttcgtggagaacgtcagcgag
ctgcagttgtgtgccatcaatttggtgacggcggttttctcccgctacagaaagcacagg
cagctcattcttgaagagatcttcaactctatggccaggctgccatccagtaaacgcaac
ttgagaaacttcagattaaacagcagcgatggaggcagcaagcatatccagatggtcacc
gccttggttcttcagctcatccagtgcgtggtgcagcttccctcctcaaaggacggagac
gacgagcacaataagaaggtggacaaagacgtcctcatcacaaattcctatgagaccgcc
atgaggactgctcagaacttcctgtcagtgttcctcaagaaatgtggcagtaaacagggc
gaggacgacttcaggcctctctttgaaaactttgtccatgacctcctgtccactgtcaac
aaacccgagtggcccgctgccgaactgctgctcagtttgctgggtcgcctcttggtgcac
cagtttagtaacaagcagacagagatggcgctgcgggtagcgtcgctggattatctcggc
actgtcgcttctcgtctgcgtaaagatgccgtcagtagcaagatggaccaaaaggccatt
gaccgcatccttaaagagttccccgggaacgacgagactcatcaactccagagggccctg
ttgtgctacatagaggagagcagtgaaatcgatcccgctctcgtctttgccaggaatttc
tacatcgcccagtggtacagggacatcaccagcgaggcggacaaggcgatgaagtcgcac
gacgacgacgacgacccgaaagctttatttgccgtcaacgacgtcgactccacggaagag
attgtgcagcgggcggaatcgcggaaaaagttattgcgcaagatcatcagaaactctcac
accaggatcagctcggacgcaattgactacagggactcttgtttgattgtccaatacctc
gcctctatgaggccgttctcacagagttttgatgtttatttatcacagatcctgagagtg
ctcggtgagagcgccatcgcagtcagaacaaaagccatgaagtgtttgtccgaggttgtg
gcggtggatccgagtattctcgcaaggcccgacatgcaacgtggcgttcacggccgcctc
atggacaactccaccagcgtgcgcgaggccgccgtggagctcgtcggacgcttcgtgctc
agtcgccctgaactcatcgagcaatactacgacatgctcatcgagaggattttggacacg
ggcatcagcgtgaggaagagagtcatcaagatcctgagggatatttgtctggagctgcca
gatttccacaagatcaccgagatgtgcgtcaagatgatccgaagggtcaacgacgaggag
gggattaagaaactggtgaatgagaccttccagaaaatctggttcacgccaacacccagt
catgacaaagacgccatgattagaaaaatcctgaacatcaccgacgtggtgctggcgtgt
aaagattccggctacgattggttcgagcagcttctccagaatcttcttaaatcagaagaa
gccgcttcttacaaaccagctaagaaggcctgcagtcaactggtggacaatctggtggag
cacatcgtgaaatatgaagactccattggagagtgtgaggacaaaggcggcaactcgggt
cgccttgtggcgtgcgtcaccacgctgtacttattcagcaagatccgaccgcagctgatg
gtcaaacacgccatgaccatgcaaccccacctgaacactaaaggcaacaatcagaatgac
ttgatgttgatttgcaacgtggccaagatcctggagctggtcgtgcctctgatggacaat
cccagcgagaatttcctcaccaccatcgaagaagacctcatgaagttgattatcaaatac
ggaatgatggtcgtgcagcactgcgtaagctgtctcggtgccgtggtaaacaaggtcaca
cacaactacaagtttgtttgggcttgtttcaatcgtttctacggcgccttggccaaactc
aagacccagcaccaggaggatcccgacagtcccaccttggtgacgaacaagcccacactt
ctccgctcgctattcacggtcggtgctttgtgtcgacactttgattttgaccaagaggag
ttcaagggtaccaataagctcctcattaaggacaaagtcttggaagttcttttgtatttt
acctcgcacaaagatgaggtggtccaagtcaaggccttgatcggtttaggcttccagttc
atcatgcacccggagctaatgttcgcgcaggacgtgaagattctctacaacaacattctg
tccgacgagcacagtctggtcagtttgaaggtccaggtgcttaaaaacatgcagacatat
ctgcaggaggaggactcgagaatgctggaagccgaccgtgactggaaggagaaggccaaa
caggaagatctgaaagagatgggcgacatctcgtcgggtatgagcagctccatcattcag
atctacctgaagcaagtgttggactccttcctgcacgcgcagtccacagtccgccatttt
gctctcagcgttatcacgttgacgctcagtcagggcctcatccatcctgtgcagtgcgtt
ccctacttaattgccatgggaactgatccggagccaaccatgaagaacaagtctgatcaa
caactggtggatattgacaagaagtattcaggctttattcatatgaaagccgtagcaggg
ctgaagttgtcctaccagatccagcgggccatcgccggatccaaagaggcgatcatccga
ggcttccgtcaccaggacaccgacgcggccctctgcgctcatctgtacactttggtccgg
gggaaccgccaacatcggcgagccttcctcatttctctgctcaacatgtttgacgacagc
tccagagccgaagtgaacttgctgctattcgtggcggacaatttggcgtgcttcccatac
cagacgcaggaagagcctcttttcatcatgcaccacgtggacatcactctgtcagtttct
ggcagcaacctgttgcagtcttttaaagagtctttaagaaaaggaccaattccaaggccg
aagaaaataaagaagaaaaaaaagaagaaggagaagaaggccaagcctcggaagatgcga
gacagctctgacgacagcgaggagagcagcagccaatccagtagcagcagcagcagtagt
agcagcagcagcagcagcagtgaggaggaggtggtggaaaagctccacacgcaatctgac
tccgacatggatgacgaggatgtggtgatggcccgcctacctgaggaccagaagcctctg
ttggacttttccctggcttcgcagggaatcctactgctgctcatgctcaaacaacacctc
aagaatttatacggcttctcagacagcaaaatccagaaatactcaccgacggaatcggcc
aaggtgtacgacaagacggtgaacaggaaatccaaggtgcacttcaatcctcgccagact
ctggaattcctgaaggtcggtctatccagctctgacatcagctacgagaccaggaagtct
atcgtcaaacagtatttacacttcaaagtgctgatggaccacctggaccgcgaggaagat
gaagaggagggcgaggccagcgccaacgccagaaacaaagcaattacctcgttgctccag
ggccccaaataccgaaaccacaaccacaacaatcacagggcgcagatcgagtctgaggat
gaggagagcgaggatgaagatcccccggcgcagaagtcacgacgaggcgacgactctgcc
gaggactacggccacatgaacgagagcgtggacgtgacggacgtggtggccatctgctgt
cccaaatacaaagacaggccgcagatcgccagggtggtacagaagaccaaaagcggctac
agcgtacactggatgtccggcacttactcagggccctgggttgtggccaagaaacgggac
ggtcgcaaaaaggtgccttggttggacaatattaaggaggcggacattatttataagaaa
atctccttaacgagcggacaaaagctgactaacaaagtggcacagacgttacgagcacta
tacgccgccaaggacgggactaaacattag
DBGET
integrated database retrieval system
