Syngnathus scovelli (Gulf pipefish): 125979697
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Entry
125979697 CDS
T08785
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125979697
04082 Neuroactive ligand signaling
125979697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125979697
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125979697
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
Motif
Other DBs
NCBI-GeneID:
125979697
NCBI-ProteinID:
XP_049594153
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Position
1:13308218..13325717
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AA seq
561 aa
AA seq
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MILPGKTSVVLLLVLLTAQGCFASKAEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHVWNDYKLRWAPVEYDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPEWVRSVFLGVLPRVMLMRRPIDQGGSSTA
SITAGTGGGGSGGGNKKRKNSVGSGSGSVSIGGITGGVACPPLDGAAGGGGASSVGGSMN
CIEYGEMNRDNKRDMNRRCPYRGKEVPTPVPPPKVAPSSQGPQTQRPPESELPKLSRALN
SPSQVNAVVAFSVISPEVKQAIESVKYIAENMRIRNKAKEVEDDWKYVAMVIDRIFLWVF
VMVCVLGTLGLFLQPLISFFK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcccgggaaaacaagcgtcgttctcctgctggtcctccttacggcgcaaggc
tgttttgcgtccaaagcagaggaccgtttatttcggaggttattccgaaggtacaaccag
ttcatccgcccagtagagaatgtgtctgatccggtcactgtggagttcgaggtgtccatg
tctcaactggtcaaagtggatgaggtgaatcagataatggaaacaaacctgtggctcaga
catgtttggaatgactacaaactaagatgggcaccggttgagtatgatggaattgagttc
atccgagttccatccaataagatatggagacctgacattgttttatacaacaatgctgtg
ggggattttttggtggaggataaaaccaaggctctgttgaagtttgatggcaccattact
tgggttcctccggctatttttaaatcctcttgccccatggacatcacctacttcccattt
gactaccagaactgctccatgaaatttggctcatggacgtatgacaaggccaagattgac
ttggtgcttattggctcaaaggtaaacctcaaagacttctgggaaagcggagaatgggag
atcattgacgcacctggttataaacacgacatcaagtataactgctgcgaggagatctac
ccagacatcacctactccttctacatccgccgcctgccgctcttttacactatcaacctt
atcatcccctgccttctcatctcgttcctcaccgtgctggttttctacctcccatccgac
tgcggcgagaaggtcaccctgtgcatttctgtcctgctctctctcaccgtgttcctgctg
gtcattacggagaccatcccctctacgtcactcgtcatccctctcatcggcgaatacctc
ctcttcaccatgatttttgtcacgctcagcatcgtgatcaccgtctttgtgctgaacgtt
cactaccgcactcccatgactcacacgatgcccgagtgggtaaggtcagtgttcctcggg
gtgctgccgagggtcatgctgatgaggcgaccaattgaccaaggcggctcctctactgcc
agcatcacagcggggacgggcggaggagggagcggcggagggaacaaaaagagaaagaac
agcgtcggaagcggatcaggaagtgtgagcattgggggcatcacagggggcgtggcgtgc
ccaccgctggatggtgcagcaggtggaggaggggcctcctcagtgggcggttccatgaac
tgtatcgagtatggtgagatgaaccgcgacaataagcgggatatgaacagaagatgcccc
tacagaggcaaggaggttccaacacctgtccctcctcctaaggtggccccctcatcccag
ggccctcagacccaaagacccccagagtcggagttgcccaaactgtcaagggccttgaac
tccccctctcaagtgaatgctgttgtggcattctctgtcatttcgcctgaggtcaagcag
gccattgaaagcgtgaagtacatcgctgagaacatgaggattcgcaacaaagccaaagag
gtggaagacgattggaagtacgttgccatggtcattgacaggatcttcctgtgggtattt
gtgatggtgtgtgttctgggaacactggggctcttcctccagccgctcatcagctttttt
aaatga
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