Syngnathus scovelli (Gulf pipefish): 125979699
Help
Entry
125979699 CDS
T08785
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310
Lysine degradation
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125979699 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125979699 (setd1ba)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125979699 (setd1ba)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125979699 (setd1ba)
HMT complexes
COMPASS/SET1 complex
125979699 (setd1ba)
COMPASS/SET1 complex (yeast)
125979699 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
125979699
NCBI-ProteinID:
XP_049594152
LinkDB
All DBs
Position
13:complement(14950893..14960868)
Genome browser
AA seq
1770 aa
AA seq
DB search
MSKPGERNKLCEDHGRKQSSTLANGTDGHPGPTEKRSHNWRSFKLIIDPALKKGSHKLFR
YDGHAFNMPNPGMPPVDSVRDPRIGRLWTKYKETDLPVPKFKIDEYYIGPVPPKEVTFAR
LNDNIREGFLTDMCKKFGDIEQVEILYNPKNKKHLGIAKVVFESVKAAKTAVQMLHNTSV
MGNIIHVELDPKGENRLRYFQLLMNGSYTPRTLPVGVEEAREVSPRSLAEALLSCEPIRR
LSESSLAGPVPPGGSSTSTTPLSLETGYSSLRQDTPQSQGTPRQAGTPFSQDSSYSSRQS
TPAYQSGRAESSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRGATSEHAPSKQQQQQQQ
QQQQQHLTPPEPAHSTPSFSYTAPPPTTPNFKSAFSPYQAPLPPAFPPSEATFHHPSQRE
GEYQRQPPPPLAAPAELLPLKDGPETPPVPEPPPEPGPHPSTPPPRTPERCPSPGSPAAA
AAERNSLDSRIEMLLKEKRTKLPFLAERDSDTEVRMEGSPISSSSSQLSPIPPYTGGGAP
DSRPCSTGLEDISPTPLPDSDEDDEPVPGTASLVKRSASPLDRDSNGQVKEEHPRAPAAT
DKMETSHQSSGEDMEISDDEMPGTPIAGGDCSKGIVVNSAVSPIQTLALPPPGFSHLAHQ
AGFAMAHHHLGTVPGHPAHLAVHPHLLPHMAAAYGPGMIPMVQMELMNCLRWEQWSTVPM
SFQMQQQMLSRMAQTRGPYPYPHFLDGAASGPFAPSYQHLSMGAGAGVHSGAPPHQWQHP
GMPKFNPTVPPPGYETKKEDPHKATVEGVLQVIVKELKAIMKRDLNRKMVEVVAFRAFDE
WWEKKERSAKASSTPIKGAEGKEEERPKPKETLGSSLLENWNKGGEGLGYEGMGLGIGLR
GAIRLPSFKVKRKDPPEAVAAGENKRARPSTPVDDELEDEERDQDTAELPLDDSKMDGAG
VPTKRRHSRPLDLDSEGEEEADTSGKEESLGDRDERADETAPGDRLSPSKSVDEEANRDS
SSDSVSSDSSSDESASSASSQSSSDASSASSDSSEYELSSEEEVSEVELEDDDAGKATKT
SSSSSSSSSSSSSSDEEGETDSKAASPPSVLIGDATEELSGKAKFRPPSPEEAEEAKAPS
PKVKEEDVSGDESGAATSEPRENLRPPTPTGALPSDSDQERKVKGKAEAEGAAATPVGVT
PCHLRSKAPLLAASSTSLMYLPLPPHPAVEGRSLLHPPPELPQRARLPTTDEDVPRTPGR
DLMERARGLGKSQSTDTVPNTPGSDAPLTGSSSLMLGSPHIPGSPFSYPAQSPVLSAGVP
RTPGRDLTFTPVFPDPAALNRKISSESLDERPVFKEPPVGAFANRASSTGTVDPSGDAGS
EIADGVPSKRKPGRPKGKKTPLASESSELSPDSTPLQDGPESGVQTTTLPPEDGFLSYEE
EAPVATKPARRARRGWEELLLDSLSPVTTPPHAYFSRRSDFEEMTILYDIWNEGIDEEDI
RLLQVTYDEMLQQDNGNDWLNDTLWVNHPQTNIPRVKKKRRDDGMRDHMTGCARSEGYYK
IDKKDKIKYLQSTRLQSEEPPVDTQGMSIPAQVHASTRAGSERRSEQRRLLSSFACDSDL
LKFNQLKFRKKKIRFCKSHIHDWGLFALEPIAADEMVIEYVGQNIRQVIADMREKRYEEE
GIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVN
EEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgggggagagaaacaaattgtgcgaggaccatggcagaaagcagagttca
acgttggccaacggcacggacggtcaccccggcccgacggagaagcggagtcacaactgg
agaagtttcaagttgatcatcgacccggcgctcaagaagggatcgcacaagctgtttcgc
tacgatggacatgctttcaacatgcccaacccggggatgccaccggtggacagcgtccga
gacccgaggatcggtcgcctttggaccaaatacaaagaaacggacctaccggtgcccaag
ttcaagatcgacgaatattacatcggccccgtgcccccgaaggaggtgacgttcgcccgc
ttgaacgacaacatccgcgagggcttcctgacggacatgtgcaagaagtttggcgacatc
gagcaggtggagatcctttacaaccccaaaaacaagaagcacttgggcatcgccaaggtg
gtctttgagagcgtcaaagcggccaagacggccgtgcagatgctgcacaacacctccgtg
atgggaaacatcatccacgtggaactggaccccaaaggtgagaatcgccttcggtacttc
cagctcctgatgaatggaagctacacgccgcggacgctgcctgtcggcgtggaggaagcc
agagaagtttcccctcgcagcctggctgaagctttactgtcatgcgaacccatccgccgg
ttgtcggagagcagcttggcgggcccggtgccgcccggcggcagcagcacctccaccacg
ccgctgtccctggagacgggctactccagccttcggcaggacacgccccagtcccagggg
acgccgcgccaagcgggcacccccttctctcaagactccagctactccagtcgccagtcc
acacccgcgtaccagtctggccgggcggagagctccggaggctacaagtcgcggcgacac
gagagcaagttccaggacgcgtacaatcgcagacctgagaggcctcagtaccgcagcaac
atgtaccgcggcgccacgtccgagcatgcgccctccaagcagcagcagcagcagcagcag
cagcagcagcagcagcacctcaccccgcccgaacccgcacattcgaccccctctttctcc
tacacggcacctccccccaccacgcccaacttcaagtcggctttctcgccttaccaagct
cccttaccgcccgctttccccccgtcggaagcgacgtttcatcacccgtcccaaagggag
ggcgagtaccaacgacagcctccgccgcctctggccgcacccgctgagcttttgccctta
aaggacggacccgaaacccctcccgtccccgagcccccgccagaaccgggaccccatccc
agcacgcctcccccgaggacgcccgagcgctgcccgtcgccgggctcgcccgccgccgct
gccgccgagcgcaatagcctggactcgcgcatcgagatgctgctcaaggagaaaaggact
aaactgcctttcctggccgagcgagactcggacactgaggtgcgaatggagggcagtccc
atttcctcctcgtcctcgcagctctcccccatcccgccgtacacgggcggtggagcgccc
gactcccggccctgtagcacgggcttggaggacatcagtcccacgccgctgccggactcg
gacgaagacgatgagcccgtccccggaaccgcctcgctggtcaagaggagcgcttctccc
ctggaccgcgacagcaacggccaggtcaaagaggagcatcctcgagcgcccgcagcaaca
gacaaaatggagacgagtcatcagtcgtccggagaggacatggagatttctgacgacgag
atgcccggcacgccgatcgctggcggcgactgtagcaaaggcatcgtggtcaactcggcc
gtgtcccccatccagaccctggccctgcccccaccgggcttctcccacctggcccaccag
gcgggcttcgccatggcccaccaccacctgggcaccgtgccgggccatccggctcacctg
gccgtgcacccgcacctgctgccccacatggccgccgcctacgggcccggcatgatcccc
atggtccaaatggagctaatgaactgtttgcggtgggagcagtggagcacggtgcccatg
tccttccagatgcagcagcagatgctgagccgcatggcgcagacgcgcggcccttaccct
tacccgcacttcctggacggcgccgcctctgggccctttgccccgtcgtaccaacatcta
tccatgggcgctggcgccggcgtgcacagcggggcgccgccgcatcagtggcagcatccc
ggcatgcccaagttcaaccccacggttcctccccctggatacgagacgaaaaaggaggac
ccccacaaggccactgtggaaggggtgctgcaggtcattgtcaaagaattgaaggccatc
atgaagagggacctcaatcgcaaaatggtggaggtggtggctttcagggccttcgacgag
tggtgggaaaagaaggaacgctcagcaaaagcatcctcgactccaatcaaaggtgcggag
gggaaggaagaagagcgacctaaacccaaagagactttgggctcaagtctgctggagaac
tggaacaaaggcggcgagggtttgggttacgagggcatgggactgggcatcggcttgcga
ggagccatccgcttgccctccttcaaggtgaaaaggaaggacccgccagaggccgtcgcc
gccggggagaacaaacgagcacggccctccactcccgtggatgacgagttggaggatgaa
gagcgcgatcaagatacggcggagctcccgttggacgactccaaaatggatggcgccggc
gttccgacaaagcggagacactcgcgcccgcttgacctggacagcgagggcgaggaggag
gcggacacgtcgggcaaggaggagtcgctgggcgaccgagacgagcgagctgacgagacg
gcgcccggtgacaggctgtcgccaagtaaaagcgttgacgaggaagccaacagagactcg
tccagcgacagcgtatcgtcggactcctcctccgacgagtcggcgagctcggcgtcgtcc
cagagcagctcggacgcctcgtcggccagctcggactcctccgagtacgagctcagctcg
gaagaagaggtctcggaggtggagttggaagacgacgacgcgggcaaagccaccaagacc
tcctcgtcctcctcttcgtcgtcatcgtcgtcatcttcgtcggacgaagagggagagacg
gactccaaggcggccagtcctccttcggtccttatcggggacgccacggaagagctgagc
ggcaaagctaaatttagacctccgagtcctgaagaggcggaggaagcgaaggcaccgtcg
cccaaagtcaaagaggaagacgtcagcggcgatgaaagtggcgcggccacgtcggaacct
cgggagaacctccgtccgcccacgccgacgggcgcccttccgtccgacagcgaccaggag
cgcaaagtcaaaggtaaagcggaggccgagggagcggccgccacgcccgtgggagtaacc
ccgtgccacctccgttccaaagcccccctgctggccgcttcttccacctctttaatgtac
ctccctctcccacctcaccccgcagtagaaggtcgttccctcctccacccgcccccggag
ctcccccaacgcgctcgtctgcccaccacggacgaggacgttccccgcacgccgggccga
gacctgatggagcgagcccgcggtctgggcaagtcccagagcacggacacggtgcccaac
accccaggtagcgacgccccgctcacggggagcagcagcctaatgctgggttccccgcac
attcccggtagtcctttctcctaccctgctcagtctcccgtcctcagcgccggagtccct
cgtactccggggcgagacttaaccttcacccccgtcttccctgacccggccgcacttaat
cgaaagatctcctccgagagcctggacgagcgtcccgtgtttaaggagccgcccgtcggc
gccttcgctaaccgagcctcgtcaacaggtacggtcgacccctccggagacgccgggtcc
gagatagcggacggcgtcccgtccaagcgcaaaccgggacggcccaaaggcaaaaagacc
cccctggcctcggagtcttcggagctgtcgcccgactcgactcctttgcaagacggcccc
gaatcgggggttcagacgacgacgctgccgcccgaagacggcttcctgtcctacgaagag
gaggcccccgtggccaccaagccggcgcggcgggcgcggcgaggctgggaggagcttctg
ctggacagcctgtcccccgtcaccacgccgcctcacgcctacttctccagacgcagcgac
tttgaggagatgaccatcttgtacgacatctggaacgaaggcatcgacgaagaggacatc
cggctcctgcaggtcacctacgacgagatgctgcagcaggacaacggcaacgactggctc
aacgacacgctttgggttaatcatccgcaaaccaacatcccccgagtgaagaagaagagg
cgagatgacggcatgagggatcacatgaccggctgtgcccgaagcgaaggttactacaag
atcgacaagaaggacaagatcaagtatctgcagagcacgcggctgcagtcggaggagccg
cccgtcgacactcagggtatgagtattcccgcgcaagtccacgcctccaccagggcgggc
tcggagcggcgctccgagcagcggcgcttgttgtcatcgtttgcttgcgacagcgacctg
ctgaagttcaaccagctaaaattccgtaagaagaagatccgattctgcaagtcgcacatc
cacgactggggcctgtttgctttggagcccattgcggccgacgagatggtcatcgagtac
gtggggcaaaacatcagacaggtgattgcggacatgcgtgagaagcgttacgaggaggag
ggcatcggcagcagctacatgttccgcgtggaccacgacaccatcatcgacgccaccaag
tgcggcaactttgcgcgcttcatcaaccacagctgcaaccccaactgttacgccaaggtg
atcacggtggagtcgcagaagaagatcgtcatctactcgcggcagcccatcaacgtcaac
gaggagatcacgtacgactacaagttccccatcgaggacgagaagatcccttgcttgtgc
ggcgccgagaactgccgggggacgctcaactga
DBGET
integrated database retrieval system
