Syngnathus scovelli (Gulf pipefish): 125979707
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Entry
125979707 CDS
T08785
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125979707 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125979707 (wdr41)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125979707 (wdr41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
125979707
NCBI-ProteinID:
XP_049594168
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Position
13:complement(14977195..14980653)
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AA seq
478 aa
AA seq
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MLRWIFGGREAQSSVEKSGVLCIGEEQPKNCFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGERAQELRGHSRQITAMAVLRCGDVRLITASSDRSVSLWDPDTGNRLQ
TVLDLQSSVKCILVLDRMSAWISGGQQLCVWSRDFRLQCLKERRSDTGQPPKHLCGRCHL
RWLALAHLGRSSVRLFCLWTGISLLIQLPENRVAAAVDKSIVIYKLMASGDALTVMEVRC
LADHQDQIRALINVDDAAFASGSHAGELIVWDALDCSMLAYQHILWEEPQNQAEQSHIQT
GGPKTSEMSIQHLASNGNLVAAAVGSGVYVFNVASKTAAAYRKRAHDSDVLHISMLSDSE
LMSCSEDGSVRMWEIRELPLAGEPASPGFFGMWTLGRSSRQACPPSKKTSDVAPSKTLEL
TGDLIGHSGAVQMFVALPENGLLTCSADHQLILWKNGEKQSRLRSLELFRKLEEKGGL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggtggatttttggcggtcgtgaagctcaaagctccgtggagaaaagcggggtg
ctgtgcatcggcgaggaacagcccaaaaactgcttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcaggtgtgcgtcggccgga
gacgatggcctggtgctggtctggaacgtggagacgggcgagcgtgcgcaagagcttcgg
ggtcactcccggcagatcaccgccatggccgtcttgcgctgcggcgacgtccgcctcatc
accgcctcttcggaccgcagcgtcagcttgtgggaccccgacaccggcaacagactgcag
accgttctggacctgcagtcctctgtcaagtgcatcctggtgctggatcgcatgagcgcg
tggatctcaggcggccagcagttgtgcgtgtggagccgcgacttccgtctgcagtgtctg
aaagagcgccgcagcgacacaggccagcctccgaagcacctttgcggccgttgccatttg
cggtggctggcgctcgctcatcttggccgttcgtccgtccgtctcttctgcctttggaca
ggaatcagcttgctcatccagctgcccgagaaccgcgtggccgccgccgtggacaaatcc
atcgtcatctacaagcttatggcgagcggcgacgccctcactgtgatggaggttcgctgc
ctggcggaccatcaggaccaaatccgcgccctgatcaacgtcgacgacgccgcctttgcc
agcggctcgcatgcgggcgagctgatcgtgtgggacgcgctggactgcagcatgctggcc
tatcagcacattctgtgggaggagcctcagaaccaggccgagcagtcccacatccaaacg
ggcgggcccaaaaccagcgagatgtccattcagcaccttgcctccaacggaaacctagtg
gcggcggcggtgggcagcggcgtgtacgtgttcaacgtggccagcaagacggcggcggcg
taccggaagcgcgcccacgactcggacgtgctgcacatctccatgctctctgacagcgag
ctgatgtcgtgctcggaggacggcagcgtgaggatgtgggagatacgagagctgccttta
gccggagaacccgcctctccaggcttctttggaatgtggaccttggggcgctccagccgg
caggcgtgtccgccgtcaaagaagacctcggacgtggcgcccagcaagacgctggagttg
acgggcgacctgattggacactcgggtgcagtccagatgttcgtggccttgccggagaac
ggcctgctgacgtgctcggccgaccaccagcttatcctttggaagaacggcgagaagcag
tcgcgcctccgcagcctggagctcttccggaaactggaggagaagggcggactgtga
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