Syngnathus scovelli (Gulf pipefish): 125979733
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Entry
125979733 CDS
T08785
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125979733 (sh3tc2)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125979733 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
TPR_8
TPR_1
SH3_9
SH3_1
TPR_2
TPR_10
TRIF-NTD
SNAP
Motif
Other DBs
NCBI-GeneID:
125979733
NCBI-ProteinID:
XP_049594218
LinkDB
All DBs
Position
1:18969167..18990065
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AA seq
1510 aa
AA seq
DB search
MALIPGSCRLLGQMASCCCRPLLHSSCCGPLIKFCLSSFTDISPAELDALWREPPYNLGG
THEHFSGNYIMTEGVGEDEDGPLVESEVDAEPDNYWKRKETLLKGSRVTVGEKCSSEVTL
LFTGRRRSNECPDRALQEALRTRLRVVESNSKDVIQLFKDLSARLVSVHAEKDSFVLTFK
TAEELWKFSTYLALGYVARCLENFLCDQSFWLEPKLLSDLEISVKVDEDHLATLYLELLL
QEGSFFAKALCTRHDEDDEDQLSFKKNDLLMVKDTGQEDMWEGTLLSTGHHGLVPITATQ
PLPYPFYQWFLRNYPGDAGCSPTDKEAFEHPLVTGSCVAVVDYSPVVQDELQLNQGDVVE
IQGLLVRGLGVFIGKHSSTGRTGFINKSHVKPLHTMSLETHLVFLTEEERTTLAQTSLFS
SESCDGNLMERLFSSDISSIYRLDRLDETDFMYIRNRPKRDHKVPASTRQSVMSDRSGGT
PPYQSSPRPSLSHSSPGVSLYQSHNSLTQEGGCLSFTVEDTFRDLGEFHEDLPLFLEENI
WEGDESEVRDPTLILLNHDHFQEDFLPMYDLKYSFLWMTFNGKGENELSGQLESVRECAK
RMGMHWAHRRACFLLGRLCARKLKLSQARVYYEEALSVQVEGFRDTPLLIALLTNLTAVY
LKQRMTDKLPLTLEKASAMLLCLPKHTYTSSDEIELLKLLLRRSMVTGDKYLEARVCYLI
ASLFLLLRKPDDALPFVERLQFLSSTLSANDGLSVAPLDLNWLLSLLYHRKYMPYLVLAS
LSLDSRQDHSLRDSFQRIERFIRNSARLNPFWKEGTSLLPAQIVVYLLQALAIAEKEGDL
KSQRDLCLGLASVYQQYGALDKSVCCAQRAVETGGFINEEEAFEASVLLSWLLVLTGQAE
KAQGVLQPLLISLQGSDSSTQRGVIHNLLALCLRQQGCIPEAGWQLHSALVISRESGNQR
NQALALANLGCLALHSGASTLAEHFLVRSLRLFEELWESPTDEEHVQTFLWLGRSYKDRG
QSHRVRVSYEMGLLMALHARNLPSQLVVAKVLSRLYSDLLLYGQSIVYYEHCVSVARELK
DKRLEGEYLEILSSLYLSLNTERSSRKSLDYTKQSLRISIDLGKREEESESWLQVGRIYY
LIQEDELADMYLQAAVKTALRMNDPHFSMSIYEEAGDVYFKGHRNRMASVPFYRDGSLPF
SRSIRDTHSEFRLLSKLIQLLMDQGEQEEALQYATLAVEVANKTGVNMNERTAYHRLATV
YYNLQHYEMAENYYLKSLSLCLPIMEHPMEARYYTQVYCRLGNLMLHKLKDSYDALGYFH
LALAAALEDQANAEALYVVYMKLAEIHGNHIPDAQLCQLYRDRAHSLKRILSGAEDSAVN
QEIGKDTDEVCDSEPFPRNCRMQVDTDRGTAIRRVDDYIPPPDTNNSLVDIPAFTASQSY
NESILTESFDTAREHMSDSCSSTDTVQTSPKQLNGDDDLSSKISLYPEKELDMAPHFDQK
DPSSGDNLSS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatccctgggagctgccgcctcttgggccagatggcgtcttgttgctgcaga
ccgctgctccactcctcctgctgtggacccctcatcaaattttgcctctcctccttcaca
gacatctctcctgctgagctggatgccttgtggagggaaccaccatataatctcgggggg
acccacgaacacttttctggaaattacatcatgactgaaggtgtaggtgaagatgaggac
ggccccctggtggagtcagaagtagacgcagagccagacaactactggaagagaaaagag
acccttcttaaaggaagtcgggtgacagtgggcgaaaaatgctcctcagaagttacgctt
cttttcactggacgccgccgctccaatgagtgtcccgaccgggctctccaggaggccctg
cgcacccggctccgtgtagttgagagcaacagcaaagatgtcatccagttatttaaggac
ctatctgcacgtctggtgtctgtccatgcagagaaggacagttttgtcctcacatttaaa
actgcagaggaactctggaagttttcgacttatttagctttaggttatgtggcacggtgc
ttggagaacttcttgtgtgatcagtccttctggctggagccaaaattgctcagcgacttg
gagattagtgtcaaagtagatgaggatcatctggccaccctctacctagagcttttactc
caggaaggatctttctttgctaaagcactgtgcacaagacatgatgaggatgatgaagat
cagctgtctttcaaaaagaatgaccttctcatggtgaaggacacgggacaggaggatatg
tgggagggtactctgctctccactggacatcacggcctcgtgccaatcaccgccactcag
ccgcttccctaccctttctaccagtggttcctgcggaattacccgggcgatgcagggtgc
tcaccaacagacaaggaagcatttgaacatccactagtgacaggttcgtgtgtagcggtg
gtcgactacagtccagtggttcaagatgagctccagctaaatcaaggagacgttgtagag
attcaaggactacttgttagaggccttggcgtcttcattggaaaacactcctccactggt
cgtaccggcttcatcaacaagtcccatgtcaagcctctgcacaccatgtcacttgagacc
catttggtatttctgaccgaggaggagcgaaccacgctcgctcagacaagcctgtttagc
tccgagtcgtgtgatggcaacctaatggaaaggctcttctcatctgacatcagctcgatt
tacaggcttgacaggctggatgagactgacttcatgtacatcaggaatcggcccaaacgt
gatcacaaggtccctgcaagcactcgtcagagtgtcatgtcggacagaagcggcggaacg
cccccgtaccaatcctccccccgcccatcgctatcgcactcatcacctggtgtgtcactc
tatcagtcccacaattctctgacacaggagggagggtgcctgtccttcactgtagaagac
acattcagagacctcggtgaattccacgaagatctccctcttttcttggaggaaaacatt
tgggagggggacgaatcagaagttagggatccaacgttgatcctgctaaaccatgaccac
ttccaggaagacttcctccccatgtatgacctcaagtattccttcctatggatgaccttc
aatggaaagggcgagaatgagctctcaggtcagcttgagagtgtcagggagtgtgccaag
aggatggggatgcactgggcacataggcgagcatgtttcctcctgggaagactctgtgcc
aggaagctcaagctatcgcaggctcgcgtgtactacgaggaagctctgagtgttcaggtg
gaaggcttcagagacacgccgctgttgatcgctctcctcactaacctcacagccgtctac
ctgaagcagcggatgaccgataagctgcccctcaccctggagaaggccagcgccatgctc
ctttgtcttcccaaacatacctacacatcctccgatgaaattgaactgctcaaactgctt
ctgaggagatcaatggtcacaggggataaatatctggaagcccgtgtgtgctaccttatc
gccagcctcttcctgctactaaggaaacctgacgatgctcttccctttgttgagcgcctc
cagttcctctcctcaactctctcggccaacgatgggctttctgtagcacctctggacctc
aattggctattgagtttgctctatcatcggaaatacatgccttacctggtgttggcttcc
ctgagcctcgactcaagacaagaccactcgctccgtgactccttccagaggattgaaagg
tttatcaggaactcagctcgcctgaacccattctggaaggagggaacctcgctgcttcct
gcccagattgtggtttacctcctgcaggcactggctatagctgagaaagagggggactta
aaatcgcagcgggacctatgtctgggcttggcctcagtttaccagcagtatggtgctctt
gataagtctgtgtgctgtgctcaacgagcagtggagacgggaggcttcatcaatgaggag
gaagcttttgaagcctctgtgttgctcagctggctgttggttttaacaggccaggctgag
aaagctcagggtgtcctacaaccactgcttatatcacttcaggggtcggacagctccact
caaagaggtgtcatccacaatctcttggctttgtgtctgaggcaacagggctgtatccca
gaggcaggctggcaactccactcggccttggtaatatcccgggaaagcggaaaccagagg
aatcaggccctggcactagccaacctgggctgcctggcactacattcaggggcatctaca
ctggcagagcatttcttggtcagatctctgcgactttttgaggaactctgggagagcccc
acagatgaggagcatgtgcagaccttcctttggttggggaggagctacaaagacaggggg
cagagtcaccgtgtcagggtgtcttatgaaatgggacttctaatggcactgcatgctaga
aacctgcccagtcagttagtggtggccaaggtgctgagtcggctctattcagacctactg
ctttacggtcaaagcatcgtctattatgaacactgcgtgtcagtagccagggagctgaag
gataagagacttgaaggagagtaccttgaaatcttaagcagcctctacctctcactaaat
actgaaagatcatctcgtaagtctttggattacaccaagcaaagcctgaggatttccatt
gatttaggcaagcgggaagaagaatctgagtcttggttgcaggtgggaagaatttattat
ctcatccaggaggatgagctggccgatatgtacctgcaggcagcagtgaagacggccctg
agaatgaacgacccccatttttcgatgagcatctatgaggaagcaggggacgtctatttt
aaaggacacaggaacaggatggcttcagtgcctttctacagggatggcagtttaccattt
tcccgaagtatcagagacacccattcagagttccgcttgctgagtaaactaatacagctg
ttaatggaccagggggagcaggaagaggctctgcaatacgcgacactagctgttgaagta
gctaacaaaacaggtgtgaatatgaatgagaggacagcctaccaccgactggcgacagtt
tactacaaccttcagcattatgagatggccgagaactactatctcaagtccttgtctctc
tgtctgcccatcatggagcacccaatggaagcgcgctactacactcaggtctactgcagg
ttgggaaatctcatgctgcacaagctcaaggattcttatgatgcattgggttatttccac
cttgctctggcagctgccctggaggatcaagcaaacgctgaggccctgtacgtagtgtat
atgaagttagcggagatccacgggaaccacatccctgatgctcagctatgccagctgtac
agagacagagcccatagcctgaagagaattctttcgggagcagaggactctgctgtgaac
caggaaattggaaaggatacagatgaagtctgtgacagtgaaccattcccaagaaattgt
cgaatgcaagtggataccgacagaggcactgcgatcagaagagtggatgactacattcct
cctcctgacacaaacaattcactggttgacatccctgcatttactgccagtcagtcttat
aatgagagtattttgactgagtcctttgacacagccagggagcacatgtcagactcatgt
agctcaacagacactgtacaaacttcccccaaacaattaaatggggatgatgatttgtcc
agtaaaattagtctctatcctgagaaagaactggacatggctccacattttgatcagaaa
gatcccagcagtggagataacctttcatcctga
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integrated database retrieval system
