Syngnathus scovelli (Gulf pipefish): 125979745
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Entry
125979745 CDS
T08785
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125979745
Peptidases and inhibitors [BR:
sscv01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125979745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Pep_M12B_propep
Reprolysin
ADAMTS_CR_2
TSP_1
ADAMTS_CR_3
Reprolysin_3
Reprolysin_5
PLAC
Reprolysin_2
TSP1_spondin
Reprolysin_4
TSP1_CCN
DAGK_cat
Peptidase_M57
Polyoma_lg_T_C
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
125979745
NCBI-ProteinID:
XP_049594265
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MEILWKTLTWTLSLVVVAASEFQSVNRLLHDSQGRASKRVCEKWHRCPLTCGIIFTEEFL
SYLQHYQLTVPVRVDENGEFLSYTVKHHRPGRRRRGAVDPSADPPESQLFYRLSAYGKHF
HLNLTLTPHLVSKHFTVEYWGRDGMEWRHNLVDNCHYVGFLQNRSGATRVALSNCNGLHG
VITTEEEQYLIEPLKNMSSPSGQWNLEEAQQHVIYKLSAVPSSQEQSQELSCGISDLVKN
SAQSPTSAATQRDDTIRNGTQRTRRSVSTERFVETLVVADKMMVGYHGRKDIEHYILSVM
NIVSLIPLSQRVPPADAFCLTLCLFFFSGGQVAKLYRDASLGNVVNIIVTRLIVLTEDQP
NLEINHHADKSLDSFCKWQKSILSHHSDDGNSIPENGMAHHDNAVLITRYDICTYKNKPC
GTLGLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGHETAK
LMAAHITANTNPFSWSACSKDYITSFLDSGRGTCLDNEPLKRDFLYPTVAPGQVYDADEQ
CRFQYGASSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGECVS
FGTWPQSENGGWGPWSLWGECSRTCGGGVSSSMRHCDSPAPSGGGKYCLGERKRYRSCNT
AACPSGSRDFREKQCGDFDNMPFRGKYYNWKPYTGGGVKTCALNCLAEGYNFYTERSPAV
IDGTRCQADSLDICINGECKHVGCDNVLASDAKEDRCRVCGGDGSTCEATEGLFNDSLPR
GGYMEVVHIPKGSVHIEIREVTISKNYIALKSEGDDYYINGAWTIDWPRKFDIAGTAFHY
KRPTDEPESLEALGATTENLVVMILLQEQNQGIRYKFNVPIQRTGSGDNEVGFSWYHLPW
SECSATCAGGSQKQEVVCKRLDDNSVVQNSYCDPDGKPPDNQRDCNSEPCPPEWFIGDWS
ECGKTCDGGIRTRTVLCIRKIGVVEEETLEDTHCLTHRPIEQEVCNNQSCPPKWVTLDWS
ECTPKCGPGFKHRIALCKSSDLTKTLPPAHCPSHNKPPVRIRCSLGRCPPPRWIPGEWGQ
CSAQCGLGQQMRTVQCMSYTGQPSSECADALRPAAMQQCESKCDATPVSNGDECKDVNKV
AYCPLVLKFKFCSRAYFRQMCCKTCQGH
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttgtggaagacgctaacttggacattgagcctggtggtggtggccgcttcg
gaatttcagagcgtcaatcgacttttgcacgactctcaaggtagggcgtcgaaacgagtt
tgcgaaaagtggcatcgctgtcctttaacatgtggaatcatcttcacagaggagttcctg
tcctacctgcagcactatcagctgaccgttcccgtgcgagtggatgagaacggagagttc
ttgagctacactgtgaagcaccaccgacccggacgacggagacgcggggcggtcgacccc
tcggcggacccgccggagtcgcagcttttctacagactctcggcctacgggaagcacttc
cacttaaacctgactctcacccctcacttggtctccaagcatttcacggtggagtactgg
ggccgcgacggcatggagtggcgccacaacctggtggacaactgccactatgtgggattc
ttgcagaaccgcagcggtgccacccgagtggcgctcagcaactgcaacggcctgcacgga
gtcatcaccacggaggaagaacagtatttaatcgagccattaaagaacatgtcctccccc
tccggccaatggaacctggaggaagcacagcaacacgttatttataaactgtccgccgtg
ccctcgtcgcaggagcaaagccaggagttgagttgcggcatttcagacctggttaaaaac
agtgcccagtccccaacgtcagccgcaacccaacgtgacgacacgatccgaaacggcacg
caacgaacgcggcgctccgtcagcaccgagcgcttcgtggagacgctggtggtggccgac
aagatgatggtcggctaccacggccgtaaagacatcgagcactacattttatccgtcatg
aatattgtaagtttgatcccgctttctcagagggtgcccccggcggacgccttttgtctg
actttgtgtcttttcttcttttctggaggtcaggttgccaaactgtaccgcgatgccagt
ctaggaaatgttgtgaacattattgtgacgcggcttattgttctgactgaagatcagccc
aacctggagatcaaccatcatgccgacaaatctttggacagcttttgcaaatggcaaaaa
tccatcctgtcccaccacagcgacgacggcaatagtattccggagaacgggatggcccac
cacgacaacgccgtactcatcactcggtatgacatctgcacctacaagaacaaaccctgc
ggaacgttaggcttggcctcggtggcgggaatgtgcgagccggagcggagctgcagcatc
aacgaggacattggccttggctcggcgttcaccattgcacacgagatcggccacaacttc
ggcatgaaccacgacggcatcggcaactcgtgcggcaccaaaggccacgagacggctaag
ctgatggcggcccacatcacggccaacaccaaccccttttcctggtcggcctgcagcaaa
gactacatcaccagtttcctcgactcaggtcgggggacgtgtctggacaatgaacctctg
aaacgagacttcctgtacccaacagtggctccggggcaggtgtacgacgctgacgagcag
tgccgtttccagtacggggcgtcctcgcgccagtgcaagtatggggaagtgtgtagagag
ctctggtgccttagcaaaagcaaccgctgtgtcacaaacagtattcctgccgccgaggga
acgctgtgccagacggggagcatcgagaaagggtggtgctaccaaggcgagtgcgtgtcg
ttcgggacctggccgcagagcgagaacggaggttggggtccttggtccctgtggggggag
tgcagcaggacgtgcggcggcggagtctcctcgtccatgaggcactgtgacagcccagca
ccttccggaggagggaagtactgcctcggggagaggaagcgctacaggtcctgtaacact
gccgcctgtccatcgggatcccgcgattttcgggagaagcagtgcggcgactttgacaat
atgcctttccgtgggaagtactacaactggaagccttacactggcggcggcgttaagaca
tgcgcactcaactgcctggcggagggatacaacttctacaccgagcgctctccggccgtc
atcgatggcacgcgttgccaggccgactccttggacatatgcatcaacggcgagtgtaaa
cacgtggggtgtgacaacgtgctggcgtcagatgccaaagaggatcgatgtcgagtgtgc
ggcggcgacggcagtacctgcgaagccaccgaaggactcttcaacgactctctgccccga
ggaggctacatggaggtggtccatatccccaaaggttccgttcacatcgagatccgagag
gtcaccatttccaagaactacatcgccttgaaatcagagggggacgattattacatcaac
ggcgcgtggaccatcgattggcccaggaagttcgatatagccgggaccgcgttccactac
aagagacccaccgacgaaccagaatctttggaagccctcggggcaaccacagagaacttg
gttgtcatgatcctcctgcaggaacagaaccagggcatccgctacaagttcaacgtgccc
atccagcgcacgggaagtggcgacaacgaggtgggcttctcctggtaccacctgccctgg
tccgagtgctcggcgacgtgcgccggaggatcccagaagcaggaggtggtgtgcaagcga
ctggacgataactcagtggtccagaacagctactgcgacccggacggcaagccgcccgac
aaccagcgggactgcaacagcgagccgtgccctcctgagtggttcattggcgactggtct
gaatgcggcaagacctgtgacggcggcatccggactaggacggtcctgtgtattaggaag
atcggggtggtcgaggaggagaccctggaggacacccactgtctcacccacagacccatc
gagcaagaggtctgcaacaaccagtcctgccctcccaaatgggttacgctggactggtcc
gagtgtacacccaaatgcgggcccggattcaagcaccgcatcgccttgtgcaagagcagc
gatctgaccaaaaccttgccgcccgcccactgtccgagccacaacaagccgccggttcga
atccgctgcagcctcggccgctgtccccctccgcgttggatccctggcgaatggggccag
tgctcagcgcaatgtggcctgggccagcagatgcgcacggtgcagtgcatgtcctacacg
gggcagccgtccagcgagtgcgctgacgccctccgacccgccgccatgcagcagtgcgag
agcaagtgcgacgccacgcccgtctccaatggtgacgagtgcaaagacgtcaacaaagta
gcctactgcccgctggtgctcaagttcaagttctgcagtcgggcctacttccggcagatg
tgctgcaagacgtgtcagggccactga
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integrated database retrieval system
