Syngnathus scovelli (Gulf pipefish): 125979748
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Entry
125979748 CDS
T08785
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125979748 (ppwd1)
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125979748 (ppwd1)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125979748 (ppwd1)
Spliceosome [BR:
sscv03041
]
Complex C
Other components
PPlases
125979748 (ppwd1)
Chaperones and folding catalysts [BR:
sscv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125979748 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR19_2nd
NBCH_WD40
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
VPS11_N
VPS8_N
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
125979748
NCBI-ProteinID:
XP_049594271
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All DBs
Position
13:complement(13687136..13690097)
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AA seq
624 aa
AA seq
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MAAAENGADLKRKADQTQDEEGENEEWVGPMPNEAVTTKKRKVLEYERVYLDNLPSAAMY
EKSYMHRDVITHIVCSKSDFIITASQDGHVKFWKKNETEGIEFVKHFRSHLGVIESISVS
VDGALLCSVGEDQAMKVFDVVNFDMINMLRLGFHPGQSEWIYNPGDAIFTVACSEKSTGK
IFVYDGRGSGEPLHMFDKMHSSPLSQIRLNAKFRVVVSADKAGMVEYWTGLRSEFKFPKH
VQWQYKTDTDLYEFAKHKTYPTSLVFSPDGKKMATMASDRKVRIFRFLTGKLMRVFDESL
TMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKVIN
VETNRCVRILGKQENIRVVQLSLFQGVAKAMQVAPTVEMKASDNPALQNVEPDPTVFCTA
FKKNRFYMFSKREPEDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHSTMGD
IHIKLFPVECPKTVENFCVHSRNGYYNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGNEF
EDEFHATLRHDRPYTLSMANAGPASNGSQFFITVVPTPWLDNKHTVFGRCIKGMEAVQRI
SNSKVHPKTDKPYEDISIINITIK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctgaaaacggtgcggatttgaagcgaaaagccgatcaaactcaggatgaa
gaaggagaaaatgaggaatgggttggccccatgcccaacgaggctgtcacgaccaagaag
aggaaagttctggaatatgaacgcgtctacctggacaacctaccttcagctgccatgtat
gaaaagagctacatgcacagagatgtaatcacccacattgtgtgctccaagtcagacttt
atcatcacggccagtcaggacggtcatgtcaagttctggaagaaaaatgagacagaggga
atcgagttcgtcaaacactttcggagtcatctcggtgtgattgagagcatctcggtcagt
gttgatggtgccctcctctgctctgtcggcgaggaccaggccatgaaagtttttgacgtc
gtcaattttgatatgatcaacatgctcaggttgggcttccatcctggtcaaagtgagtgg
atctacaatcccggagatgccattttcacggtggcctgctcggaaaaatccaccggcaag
atttttgtctacgacgggcgaggaagcggcgagcctctccacatgtttgacaagatgcac
tcctcgccgctgtcgcagattcggctgaatgccaaatttcgagtggtcgtctccgccgac
aaagcgggaatggtggagtactggaccgggctccgctcggaattcaagttccccaaacac
gtgcagtggcaatacaagacggacacggatttgtacgagttcgccaaacataaaacatac
cccaccagcctggtgttctcccccgatgggaagaaaatggccaccatggcgtctgaccgt
aaagtcagaatcttccgctttctcacggggaaactgatgagagtgtttgacgaatcctta
acgatgttcacagaactgcagcagatgaggcagcagctgcccgacatggaatttggccgt
cggatggcggtggaacgagagctggagaaggtggacggcatccgactcaccaacatcatc
tttgacgagacgggccatttcgtcctgtatgggaccatgctgggcatcaaggtcatcaat
gtggaaaccaataggtgtgtgcgcatacttgggaagcaggagaacatccgcgtggtccag
ttgagtctctttcagggggtcgcaaaggccatgcaagtggcacccaccgtggagatgaag
gcctcagataaccccgctttacagaatgtggaaccggaccccaccgtgttctgcacggcc
ttcaagaagaaccgattctacatgttctcaaagagggaacccgaggacaccaagagcgcc
gactctgaccgagacatcttcaacgagaagccctccaaggaggaggtgatggccgccacg
caggccgagggccccaagcgagtgtcggacagcgccatcattcactccaccatgggtgac
atccacatcaagctcttcccagtagagtgcccgaaaacggtggagaacttttgtgttcac
agcaggaacggctactacaacggacacatcttccacagagtcatcaagggtttcatgatc
cagaccggagaccccactggcaccggcatggggggtgagagcatctggggcaacgagttt
gaggacgagttccacgccaccctgagacacgatcggccatacacgctcagcatggccaac
gctggccccgcctccaatggctcgcagttctttatcacggtggtgcccacgccttggctg
gataacaagcacacggtgttcggaaggtgcatcaaaggcatggaggccgtgcagaggatc
tccaactccaaagttcaccccaaaacggacaagccgtacgaggacatcagcatcatcaac
atcaccatcaaatga
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