Syngnathus scovelli (Gulf pipefish): 125979751
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Entry
125979751 CDS
T08785
Name
(RefSeq) spliceosome-associated protein CWC27 homolog isoform X2
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125979751
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125979751
Enzymes [BR:
sscv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125979751
Spliceosome [BR:
sscv03041
]
Complex C
Other components
PPlases
125979751
Chaperones and folding catalysts [BR:
sscv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125979751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
HI_1622_C
DUF3104
Motif
Other DBs
NCBI-GeneID:
125979751
NCBI-ProteinID:
XP_049594275
LinkDB
All DBs
Position
13:13690352..13728782
Genome browser
AA seq
461 aa
AA seq
DB search
MSNIYIQEPPTNGKVLLKTSAGDIDIELWSKEAPKACRNFVQLCMEGYYDGTIFHRVVPE
FIIQGGDPTGTGTGGESIYGETFKDEFHTRLRFNRRGLVAMANAGPHDNGSQFFFTLARA
DELNNKHTIFAKVTGDTVYNMLRLADVACDNNERPLNPHKIRTAEVLHCPFDDIEPRETK
KSKKEKEKEEGKKSQSKATKNFSLLSFGEEAEEDEEVVNQVSQSMKGKSKSSHDLLKDDP
RLSSVPAVDKKEKTSGDEAEEDDEREKMSELVRAKLTKEKSAGKAGESQDEYERGKKSSR
SEELRKEVRQLKKDIRALKQKDDGPKPATDEVEEESKEPTSEAVAEYLEERKKYEERRKD
KRRKGSGREQQTMELLNRFKDKLSTAISEAPEEEEDEEELAEDDDKGWLGHVLHFDEQSR
KVKDATMQDEDTFEIYDPRNPVNKRRREESKKIMKEKKAKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatatacattcaagaaccacccacgaacggaaaggtcttgttaaagacctcc
gcgggtgatatcgacatcgagctgtggtccaaagaagctcctaaagcctgtaggaacttt
gtccagttgtgtatggaaggttattacgacgggacaatattccatagggtggtacctgaa
ttcattattcagggtggagatccaacagggacggggacaggaggagagtccatctatggg
gaaacgtttaaggatgagtttcacaccagactgcggttcaatcgaagaggtttggttgcc
atggccaacgccgggccgcacgacaacgggagccagttcttcttcacgttggcacgtgct
gatgagctcaacaacaaacacaccatttttgccaaagtgactggagacacggtctataac
atgctaaggttagcggacgtagcatgcgataacaacgagagacctttgaatccgcacaaa
ataagaactgctgaggtgctgcactgtccttttgatgacattgagccacgtgaaacgaaa
aaatcaaaaaaggaaaaagaaaaagaggaaggaaagaaatctcagtcaaaagccacaaag
aacttcagtctgctgtcgttcggcgaggaggccgaagaagacgaggaggtggtcaatcaa
gtcagccagagcatgaaaggaaagagcaaaagcagccacgaccttctgaaggatgacccc
agactgagctccgttccagccgtcgataaaaaagagaagacatctggagatgaagcagag
gaggacgatgagcgcgagaaaatgagcgagctggttagagccaaacttacaaaagaaaaa
agcgcgggaaaagccggcgagtcccaagatgaatacgagcgggggaagaaaagcagccgc
agcgaagagttgcgcaaggaagtccgtcagttgaagaaggatatcagggcattgaagcaa
aaagacgacggccccaagcccgccacggatgaagtcgaggaggaaagcaaagagccgacc
agcgaggctgtggccgagtacctggaggaaaggaagaagtacgaggagcggaggaaagac
aaacgcaggaaaggttcgggcagagagcaacagacaatggagctcctcaaccgtttcaag
gacaagctatcgacggccataagcgaagccccggaggaagaggaggatgaggaagagcta
gccgaggatgacgacaaaggatggcttggccatgtgctgcactttgatgagcagtccagg
aaggtcaaagacgcaaccatgcaggacgaggacaccttcgaaatctacgacccacggaac
cccgtcaacaagcggcgacgggaggagagcaaaaagatcatgaaggagaaaaaagctaag
cgttga
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