Syngnathus scovelli (Gulf pipefish): 125979761
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Entry
125979761 CDS
T08785
Symbol
map1b
Name
(RefSeq) microtubule-associated protein 1B isoform X1
KO
K10429
microtubule-associated protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125979761 (map1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125979761 (map1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125979761 (map1b)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125979761 (map1b)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
125979761 (map1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
125979761
NCBI-ProteinID:
XP_049594288
LinkDB
All DBs
Position
13:complement(14836562..14852025)
Genome browser
AA seq
1811 aa
AA seq
DB search
MSVLVQQSVHAMPEAMPTAEPMTAPGSAAAVAASPARHFVDSKFYLLVVLGEMAAEENLK
CAVADIEKGIRSWDTNLMDCNLDQELKLFVSRHSARFSADVKGQRILHHKSNVLETVVLI
NPADDTVSTEVRLMISNSARHKLLILSGQCTESTGELLLQSGSFSFSKFIDIFTDQEIGE
LLSTVHPENKAHLTLSCPDQGEWRNSQLDKHNLQDFINMKLNSPLILPEMEGLSEFTEYL
SESVEILSPFELLEPPASGGFLKLSKPCCYIFPAGRGDSALFAVNGFNMLVNGGSDRKSC
FWKLVRHLDRVDSILLTHVGDDNLPGVNSMLRRKMAELEEERSRDSASDGEWLKNMISPD
IGVVFVNFPENVDVPEHDHRVRKNLEEAAAARQLLAKLNLRTEPLQRPVGNTVEPMVLFQ
KMGVGKLEMYVLNPAKNSKEMQHFLKQWTGSPKDTASILLPDGKESQFPVSHLTSIASLI
VWHPANPSEKVVRVLFPGNATQRHIFEGLEKLKHLDFLKQAVVTQKAPPAQAAKMKNRTD
SKESLKSIKSTPKPSPAKDARKEFKEEAAKADADQLTPEKQKREKNPPKKERAKAPPEKE
SKVKTETPEKKPTLIKTKAEKERLAKKDVKMTPEKKKEVRKEGAKKEDTLKRDERVKKED
AKKRDVKKDVRRDSPIKEKKDDKRELKKDGKRLTAKKVEDKVLSPKPKTLKKDAGTPSKL
KAKGGPKVAKTATAAVPVTLRPDDERATMSSPEDLTKDFEELREEDAPAEAVAAQEEEPA
VVTHSQESPEAPESVDEGIATTEAEGENGATPDEPAAALKPQLDKFENEGAAMEEASDYE
EKAETEELDEPGKAPSWGTLDDEKKEEVASAPPKESSPVSPAASFHDETFPAGVETSTAS
DEAPEEFTVTSDLPRSTVELSSVPAPLDETSTPTTLMMSQPGEYEKSRLALRSGDSKSEA
TQGQDYNHSASTISPPSLLEEDKLTWDVPEDFGKQDTAPLVHSPPSEQNFESPSTLAAVP
IELSTTLAGYGRADPALSPDDKTLEGAGSPQSSGHTPYYQSPVEDKAGTLPPASDDEEQG
PVIVEVTSDKEEDDKLACSSRSPKDDIGRGVFFRQESEAPYTAAFKDESKMSISEGSSAS
EKSSTPLEEAAADDMFSHLASASTASLATSSLPEPTTDSPSLHAEVGSPHSTEVDDSLSV
SVGQTPTLFHEAASPSKEDCPRPMSISPDVSPKTKVNAQMHDAKSPEHSTMSLESPDHSL
ALDFSKQSPEHPSAGSNSRATENGPTEIDDAPWDAAEKPLLFQDCDSARAASATPSDASQ
STPSVTTPCQMTEMPLVVDEPPLAVPPDVGPVSPSAEELAKGVEVTKAASLSPSHSSHSS
ESSPVSGGPVERASAGGAQHEPSSLSAFWFSDQEKPLPVKETNPFLSDHSPLGIKSPVSP
QVSSPPPAPSSHAACRFREPADSSEISPTGFSKTQVDLCLVTSCEYRHPKTELSPSFINP
NPVEYFLNEAEEKILETAGGGPPPPGGKLPAKQCEETPPTSISESAPSQTDSDVPPGTEE
CPSITADANIDSEDDSETLPTDRTLTYRHADPPPAPIRDWPPPPGPPDVCMVDPEALKAE
ENRHNANTEAGEKPKKKKLTKKASSPTRKSALSKAKDSKTASPKKNLGEGKDAKNATNTS
ASRGSGGGKVSALANCPPMYMDLVYIPNHGNANNVDAEFFQRVRSSYYVVSGNEQTSQEP
SRAVLDALLEGKARWENNTQVTLIPTHDTDVMREWYQESHEKQQELNVMVLASSSTVVMQ
DESFPACKIEM
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcctggtgcagcagagcgttcatgcgatgcccgaagcgatgccgacggcggag
ccgatgacggcacccggctcggccgccgcggtggccgccagccccgcgcgacactttgtc
gactctaaattctacctgctggtggtcctcggcgagatggccgcggaggagaacctcaag
tgcgccgtggccgacatcgagaagggcatccgctcatgggacaccaatctgatggattgc
aacctggaccaggaactcaagctttttgtatcccgacactcggcgcgtttctccgccgat
gtcaaaggccagagaatccttcaccataaaagcaacgtgctggagacggtggtgctcatc
aaccccgccgacgacaccgtcagcaccgaggtccgattgatgatctccaactcggccaga
cacaagcttctgatcctgtcgggccagtgcacggaaagtacgggcgagctcctacttcag
tcgggctcgttttccttctccaagttcatcgacatcttcaccgaccaggagatcggcgaa
ctgctgagcaccgtccacccggagaacaaagcccacctgacgctgtcctgccccgatcaa
ggcgagtggagaaactcccagctggacaagcacaacctgcaagacttcatcaacatgaag
ctgaactcgccgctcatcctccccgaaatggagggcctctccgagttcaccgagtacctg
tccgagtcggtggagatcctcagcccttttgagcttctggagccgccggcctcgggcggc
ttcctcaagctctccaagccgtgttgctacatcttccccgccggtcgcggcgactcggct
ctcttcgccgtcaacggcttcaacatgctggtcaacggcggctccgacaggaagtcgtgc
ttctggaagctggtcaggcacctggaccgcgtggactccatcctgctgacccacgtcggc
gacgacaacctgccgggcgtcaacagcatgctgaggaggaagatggccgagctggaggag
gagcgctcgcgggactccgcctccgacggcgagtggctgaagaacatgatctcgcccgac
atcggagtcgtcttcgtcaacttcccggagaatgtggacgtccccgagcacgatcacaga
gtacgcaagaacctggaggaggcggcggccgctcggcagctgctggccaagctgaatctc
agaaccgagccgctgcaacgccccgtcgggaacaccgtggaacccatggtgctctttcag
aagatgggcgtgggaaagctggagatgtacgtcctcaatccggcaaagaacagcaaggag
atgcagcattttctcaagcagtggaccgggagccccaaggacacggcgtccatcttgctg
cccgacgggaaggagtcccagttccccgtgtctcacttgacgtccatcgcctcgctcatc
gtgtggcaccccgccaacccctcggagaaagtggtgcgcgtcctctttccgggaaacgcc
acccagcggcacatctttgaaggcttggaaaaactcaagcacctggacttcctgaagcag
gcggtggtcacgcaaaaagcgccgcccgcccaagcggccaagatgaagaacaggaccgac
agcaaagagagcctcaagtccatcaagtccacgcccaagccgtcgcccgccaaagacgcc
aggaaagaattcaaggaggaggcggccaaggcagatgccgaccagctgactcccgaaaag
caaaagagagaaaagaacccgcccaagaaggaacgagcaaaggcgccgccggagaaggag
tccaaggtaaaaacggaaacgccggaaaaaaagccgaccctgatcaaaaccaaagccgag
aaggagcgcctcgccaagaaagacgtgaagatgactcccgagaagaaaaaagaggttaga
aaggaaggagccaagaaagaggacaccctcaagagagatgaacgagtgaagaaagaggac
gccaagaaaagggacgtgaagaaggacgtcaggagagattcccccatcaaggagaaaaag
gatgacaagagggagctgaagaaagacggcaaaaggctgaccgccaaaaaagtcgaggac
aaagtcctgtcccccaaaccaaagaccctgaaaaaagatgcaggcacgccctccaaactg
aaagccaaaggaggtcccaaagtagcaaagacggccaccgccgccgtccccgtcacgctc
cgccccgacgacgaaagggcgaccatgtcctcgccggaagacctcaccaaggactttgag
gagctccgagaggaagatgcgccggcggaggccgtggctgcgcaagaagaggagcccgcc
gtcgtcacgcacagccaagagtcccccgaggcgcccgagtcggtcgacgagggcatcgcc
accaccgaggccgaaggggaaaacggcgccactccggacgagccggcggcggcgctcaag
cctcaactggacaagtttgaaaacgagggcgccgccatggaggaggcgtccgattacgaa
gagaaagcggaaaccgaggagctggacgaaccgggcaaagcgccgtcctggggaactctt
gatgatgagaagaaggaagaggttgcgtcagctccaccaaaagagtcttcgcccgtttcc
cccgccgcttccttccacgacgaaaccttcccggccggcgtggagacctccaccgcctcc
gacgaagcacccgaggagtttaccgtcacctccgacctcccgcgctccaccgtggagctc
tccagcgtgcccgccccgttggacgagacgtcaactccgacgacgttgatgatgtcacaa
cccggagagtacgagaagagcagactcgctttacgttcgggcgactccaagagcgaagcc
acgcagggccaagactacaaccacagcgcctccaccatatcgccaccatcgttattggaa
gaggacaagttgacttgggacgttccagaagactttggaaagcaggacacggcacctctg
gtgcattcccccccgagcgagcagaactttgagtctccgtccacgttggccgccgtcccc
atcgagctgtccacgaccttggcggggtacggtcgggcggatcccgccctcagcccggat
gacaagacgttggaaggggcgggctccccccagtcctcgggtcacacgccttactaccag
tccccggtggaggacaaagcgggaactctgccgcctgcgtcagacgacgaagagcaaggt
cccgtcattgtggaggtcacgagtgacaaagaggaggatgacaagctggcgtgctcttcc
agaagcccaaaggacgacatcggcagaggcgtctttttcagacaagaatcggaagctccc
tacacggccgctttcaaagacgagagcaaaatgtccatttcggaaggcagcagcgcttcg
gaaaagtccagcacgccgctggaagaagcggcggctgacgacatgttttcgcacttggcc
tcggcgtccaccgcctcgctggccaccagctccctgcccgagcccaccaccgactcgccg
tcccttcacgccgaggtgggttcccctcactccacagaagtggacgactccttgtccgtt
tcggtgggtcagacccccacgcttttccatgaggcggcgtctccatccaaggaagactgc
cctcggcccatgtccatctccccggacgtctcgcccaagaccaaagtcaacgcgcagatg
cacgacgcaaaatcaccggaacattccaccatgtcgctggagtctccggatcactcgttg
gccctggacttcagcaagcagtctccggagcacccgtcggcgggaagcaactcgcgcgcc
accgagaacggccccaccgagatcgacgacgctccttgggatgcggcggagaaacctttg
ctcttccaagactgcgattcggcccgcgccgcttccgcgacaccgtcggacgcatcgcag
tccactccgtccgtcaccaccccgtgccagatgacggagatgcccctcgtggttgacgag
ccgcccctcgccgtccctccagacgtcggccccgtttcgccgtccgccgaggaactcgcc
aaaggcgtggaagtgacaaaggcggcctctctctcgcccagccattcgtcccattccagt
gagtcttccccggtttcgggaggtcccgtggaacgagcgtctgcgggtggcgcccagcac
gaacccagctccctctctgccttctggttttcggaccaagagaaacctttaccggtcaag
gagaccaacccgtttctcagtgaccattcaccgcttggaatcaaatctcccgtcagcccc
caagtgtcttcccccccgccggcgccgtcctcacacgcagcctgccgcttccgggagccc
gccgactcctccgagatcagtccgaccggcttctccaagacacaagtggacctctgtttg
gtcacgtcgtgcgaataccgtcatcccaagacggaactgtcgccgtctttcatcaacccc
aaccctgtggaatatttcctcaacgaagcggaagagaagattctggagacggcggggggc
gggcctccccctccaggggggaagcttcccgcaaagcaatgcgaagagactccgcccaca
tccatcagcgaatccgcaccctctcagaccgattcggacgtgccgccggggacggaggag
tgcccgtccatcacggccgacgccaacatcgactcggaggacgactcggagactctgccc
accgatcgaacgctcacctacaggcacgccgaccctccccctgcgccgatcagggactgg
cctccgccccccggtccccctgacgtctgcatggtggatccggaagccctcaaggccgag
gaaaaccgccacaacgccaacacggaagccggcgaaaagcccaagaagaaaaagctcacc
aagaaggcgtcgtcgccgacacgcaaaagcgctctgtcaaaagccaaggactcaaagacg
gcctctcccaagaagaatctgggcgagggcaaggacgccaaaaacgcaaccaatacgtcg
gcgtcccgaggttccggcggcgggaaggtgtccgctctggccaactgtcctcccatgtac
atggatttggtctacatccccaaccacggcaacgccaacaacgtggacgcagaatttttc
cagcgggtgcgctcgtcctactacgtggtcagcggcaacgagcagacgtcgcaagagccc
agtcgggccgtgctggacgctctgctggaagggaaagcccgctgggagaacaacacgcag
gtgacgctgatacccacccacgacaccgacgtgatgagggagtggtaccaagagagccac
gagaagcagcaggagctcaacgtcatggtcctggccagcagcagcacggtggtcatgcag
gacgagtccttcccggcctgtaagatcgaaatgtag
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