Syngnathus scovelli (Gulf pipefish): 125979806
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Entry
125979806 CDS
T08785
Symbol
zer1
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125979806 (zer1)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125979806 (zer1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
HEAT_EZ
APC1_C
Motif
Other DBs
NCBI-GeneID:
125979806
NCBI-ProteinID:
XP_049594411
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All DBs
Position
13:3943357..3964718
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AA seq
784 aa
AA seq
DB search
MAAKEGDNPDSLMTLATVFCLRNLRKTMCYQGLRDKLCLRSDIFLPSEICDKLVNVYMEL
VHTDSNFEPEENFFQLFSEPRSTRLTRVQLKEDFVHDRDLEAIRKQDLIELHLTYCNSLS
SRSLKTLTCFRETLVSLCLFGCSNIFYRKGGTPLACNEDTEDDEEESPVSRQALKTDFNF
QGFNRLRLLNLGGLPDEMHAETLLKPLKLLTSLDLSNVQLLGTTFLTQWKDRLASLVLYN
VDLSEELVNTVVELVNLRHLDISRESRRTSKFKMTRKILTAIVQRLVNLVSLDISGHIML
DNCTVPHLEEAMGRPSNEPCKSSIYPFQELKRPLQFLGLYDTTLCNVTHIPAYKVTGSKN
EDQVLNAIEAYTEFRPELAHRAINQLFDIARIQHCVQLLRALQLVIAALKCHKYDKSIQV
TGSAALFYLTNTEYRSDQSVRLRQEVIRVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELE
FQYSRVNQLLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQ
KKLQDRMCDQVMEFSWSALWNITDETPDNCQMFLNCHGMTLFLDCLKEFPDKQELHRNML
GLLGNVAEVRALRPKLVTPQFISVFSNLLDSKADGIEVSYNACGVLSHIMFDGPELWSME
EPLRDTVMDKMWDAIQSWDVSSRRNINYRSFEPILRLLPQSIAPVSQHWATWALYNLVSV
YPSKYCPLLIKEGGIGLLEKVLELESSQPETKDMAVKVMEQCESFKEDPMETNHVQEVNY
GQRG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaaggagacaaccccgacagcctcatgactctggccacagtattctgc
ttgaggaacctcagaaagacaatgtgctatcagggtttgagggataagctctgtttgcgc
tcagacatctttcttcccagtgaaatctgcgacaaattggtcaacgtgtacatggagttg
gtccatacagacagtaactttgaaccagaagaaaactttttccaactattctcggaaccc
cggagcaccagactcaccagggtgcagctgaaggaagactttgtccatgacagagacttg
gaggctataagaaaacaggacctgattgagcttcacctcacctactgcaacagtctatca
tcccgcagcttgaaaacactgacctgcttccgcgagacgctggtctctctttgtcttttt
ggctgcagcaacatattctatagaaagggcggcaccccattagcttgcaatgaagataca
gaggatgacgaggaagaaagccctgtgtcaaggcaggcattaaagacggactttaacttt
caggggtttaaccgcctgcggttgctcaacctgggtggcctaccagatgagatgcatgct
gagactttgctcaaacctttgaagttgctcacctcactagatctgtctaatgtacagtta
ctggggacaacctttctaactcagtggaaagacaggctggcatctcttgttctctacaat
gtggacctttcagaagagttggtcaatacggtggtggaacttgtcaatctcaggcatctt
gacatctcgcgtgagagtaggaggacttccaagtttaagatgacaaggaagatcttgact
gctatcgttcaaagactggtcaatctggtctcactggacatttcaggtcacatcatgctt
gacaactgcacagttccacacctagaagaagctatgggccgtccaagtaacgagccatgc
aagagcagcatctaccctttccaagagctgaagaggcccctgcagtttttgggtttatat
gacactaccctttgtaatgtgacgcacatcccagcttataaggtgactggttcaaagaat
gaagaccaggtcctaaatgctattgaagcttatactgagtttcgtcctgaattggcccat
agagctatcaatcaactgtttgacatcgccagaatacaacactgcgtccagctactccga
gcgttacagcttgttatagcagcattgaagtgccacaaatatgataagagcattcaggtg
acaggaagtgctgcgctcttttacctgacaaacaccgaataccgcagtgaccaaagtgtg
cggcttcgccaggaggtcatccgagtggttttaaatggaatggagcaataccaggaggtc
actgttcaaaggaactgctgcttgactctgtgcaacttcagtattcctgaggagttggag
tttcagtacagtcgggtaaaccagctgctgctaaaaattctggagccggcaaggcaggat
gaatccatccagagaatcgctgtgcacctctgcaatgctttagtctgccaggttgacaac
caccataaggaagctgtgggaaagatgggttttgtgaagacaatgttgaacttaatacaa
aagaagttacaggatcgaatgtgtgaccaggtgatggagttctcttggagtgctctgtgg
aatattactgatgagacaccagacaactgtcagatgttcctcaactgtcatggaatgact
ctctttttagactgtctaaaagagtttccagataaacaggagctacatcgcaacatgctg
gggcttctgggtaatgttgctgaggtcagagcgctacgaccaaagctggtcacgccacag
ttcatctctgttttcagtaatctactggacagtaaggccgatggtattgaggtatcatac
aatgcgtgtggcgtgctttcccacattatgtttgatggaccggagctttggtcgatggaa
gagccactaagagacacggtgatggacaagatgtgggatgcgatccaaagctgggacgtc
agctcacgtcgcaacatcaactacaggtcattcgagcccatcttgcgacttctgcctcaa
agtatcgctccagttagtcagcactgggccacatgggctctgtacaacctggtgtcagtt
tacccaagcaagtactgtcccctgctcataaaagaaggaggaattggccttttggagaaa
gttttggagttggaaagttcgcagccagagacaaaagacatggccgtgaaagtaatggag
cagtgtgagagcttcaaagaagaccccatggaaacaaatcatgtacaggaggtaaactat
ggacaaagaggttga
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