Syngnathus scovelli (Gulf pipefish): 125979833
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Entry
125979833 CDS
T08785
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125979833 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125979833 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125979833 (cdk9)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
125979833 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
125979833 (cdk9)
Protein kinases [BR:
sscv01001
]
Serine/threonine kinases: CMGC group
CDK family
125979833 (cdk9)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
125979833 (cdk9)
Brd4/P-TEFb complex
125979833 (cdk9)
7SK RNP complex
125979833 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
RIO1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
125979833
NCBI-ProteinID:
XP_049594519
LinkDB
All DBs
Position
13:5272849..5277118
Genome browser
AA seq
393 aa
AA seq
DB search
MQREKTNNSGGTEKPDREAAIMSKYYEGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQYNRYKGSI
YLVFDFCEHDLAGLLSNTNVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPDVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDAYALDLIDKLLVLDPAQRTDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQPPNQNRNPATTSQTEFDRVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagaaaaaaccaacaactccggcgggactgaaaagcctgaccgagaggccgcc
attatgtccaaatactacgaaggagttgaatttcctttctgtgacgagttctccaaatat
gaaaaactagcaaaaataggacaagggacatttggggaggtgttcaaagcaaaacacaga
cagactggaaagaaggttgcactgaagaaagttttaatggaaaatgagaaggaagggttc
ccgatcactgctctgagagagataaaaatcctgcagctgctcaaacacgagaatgtggtg
aatctgattgagatttgcagaactaaagctacccagtataaccgatacaaaggcagcatc
tacctggtgtttgacttctgtgagcacgacctagccggactgcttagcaacaccaatgtt
aagttcaccttggcagagatcaagaaggtcatgcaaatgttgctcaatggattatactac
atccacagaaacaagatccttcacagagacatgaaagcagccaatgtgctcatcaccaga
gatggcgtcctaaaactggctgacttcggtttggctcgagctttcagcctagccaaaaac
agccaagggaaccgctacaccaaccgcgtggtcacactgtggtacagaccaccggagctg
ctgctcggtgaacgagactacggtcccccgattgacttgtggggagcaggctgcatcatg
gcagaaatgtggacaagaagtcctatcatgcaagggaacactgagcagcaccagctcact
cttatcagccagctttgtggctccatcacagccgaagtttggcccgatgtggacaagaag
tatgagttgtaccagaaaatggagcttcccaaaggccaaaaaaggaaagtgaaggatcgt
ctcaaagcttacgtcaaagacgcctacgctctcgatctgattgacaagctgctggtcctg
gacccggcccagcgtacagacagcgacgacgctctcaaccatgattttttctggtctgac
ccaatgccgtcggacctcaagaacatgctttccacccataacacctcgatgtttgaatat
ctcgcaccaccccggcgaagaggccacatgccccaacagccgcccaaccagaacagaaac
cctgccaccaccagtcagactgagtttgatcgagtgttttag
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