Syngnathus scovelli (Gulf pipefish): 125979846
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Entry
125979846 CDS
T08785
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04068
FoxO signaling pathway
sscv04110
Cell cycle
sscv04120
Ubiquitin mediated proteolysis
sscv04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125979846 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125979846 (skp2)
04150 mTOR signaling pathway
125979846 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125979846 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125979846 (skp2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125979846 (skp2)
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Ortholog
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GFIT
Motif
Pfam:
F-box-like
F-box
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_9
Motif
Other DBs
NCBI-GeneID:
125979846
NCBI-ProteinID:
XP_068508784
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Position
13:complement(5204297..5250304)
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AA seq
420 aa
AA seq
DB search
MPGDSVPLQDVFCFGVQGSMLTRAKSSSKRKCQDDLTEGLDTECTPTDLIQQWSPGHKRQ
HSLCKGKENDGKPFVISRRSRKRKESISAGISWDRLPDELILRILIFLPLQDLLKTSVIC
RRWHRLAFDESLWQSVDLEGVTNMGLALQQVLKTGVRRLRCPRSFINNLHLTGTCTLQVA
EMDLSSSIITTPILESIICSCNLIECLSLEGLQLSDNIISSLAQNWRLRQLNLSGCSDLS
AEPLGHMLQSCTRIEQLNISWCHFNSNHVKSVVNHVSSNVTHLNLSGYRDGLTLDDVKAL
VTRCPDIHTLDLSDSTQLMADCFPVLSELKHLHHLSLSRCYHIHIASLTDLRKTFPKLHY
LEVFGLVNDSHLSSLRKENPAIYINSLPFSAVARPTPATVLGTVGGYSMWNRKNRLRFKL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccaggagacagcgtgcctctgcaggatgtgttttgcttcggtgttcaaggctccatg
ttgacccgagccaagagtagcagcaagcgcaagtgccaagacgacttgactgagggcctg
gacactgaatgcactccaacggacctcattcaacagtggtcacctgggcacaaacggcaa
cattctctttgtaagggcaaagagaatgacggaaagccttttgtaatttccagacgatca
agaaagaggaaagaatcaatatccgcaggcatttcatgggaccgccttccagacgagttg
atcctccggatcctcatcttcctacctctgcaggacctcctcaagacatctgttatttgc
aggcgctggcatcgtttggcgtttgatgagtcactttggcaaagtgtggacctagagggg
gtgaccaatatgggtttagcgctgcagcaggtgttgaagacgggggtgcgcaggttacga
tgccctcgatctttcataaacaaccttcacctaactggcacatgcacactgcaggttgct
gaaatggacctttccagctcaatcatcaccacgcccatccttgagagcatcatctgtagc
tgtaatctgatagagtgtcttagtctggaaggcctgcagctctctgacaacattatcagt
agtctggcccagaattggcgtctacggcagctcaacctcagcggctgctccgacttgtct
gctgagcccctcggccacatgctacaatcctgcaccagaatagaacagttgaacatatcg
tggtgccacttcaatagcaatcatgtgaagagcgtggtaaatcatgtcagctccaacgtt
acacacctgaacctcagcggatacagagatggcctcacactagatgatgtgaaggccttg
gttacaagatgtcctgatattcatacactagatttgagtgacagcactcagctgatggct
gactgtttccctgtgctgtctgagctcaaacatctgcaccatctgtccttgagccgctgc
taccacattcacattgcctccctcactgacctcaggaagacgttccccaaactgcactat
ctggaggtttttggcctcgtaaatgacagccacttgtcctcattgaggaaggaaaaccct
gccatttatattaactcactgcctttctctgctgtcgcccgacccacgcctgccaccgtc
ctgggtaccgttggaggctacagcatgtggaacaggaaaaatcgactcaggtttaagtta
tag
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