Syngnathus scovelli (Gulf pipefish): 125979858
Help
Entry
125979858 CDS
T08785
Symbol
chrnb1l
Name
(RefSeq) cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125979858 (chrnb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125979858 (chrnb1l)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125979858 (chrnb1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125979858
NCBI-ProteinID:
XP_049594561
LinkDB
All DBs
Position
1:27709554..27715144
Genome browser
AA seq
507 aa
AA seq
DB search
MGSLDYRKKMSGPNNIMNIHRKANQLVIVYLCLSLTGASETERRLHEEIFKNYNLKVRPA
QYWEEKVMVRVGMTLSQLVSLNEKNGEMTTNVFMNLEWKDYRLSWDPKAYDNIDVLRIPA
NKVWRPDIYLINNNDGQFDVALYVNVLVYNDGTVNWLPPAIYRTSCSIEVAYFPFDWQNC
SMVFRSYTYDASEVDLQYYLDDNGKEIREIVIDENAFTENGEWNICHKPSRKNVKEDLYE
DITFYLIIERKPLFYIINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLL
LADRVPETSLAIPIIVNYVMFTMILVTFSVILSVVVLNLHHRTPSTHIMPSWVRSLFINF
LPKYIGMTRPEQDECLLKEDSCDQTPPPSFNGRQPGGEYFFRKINPDLVIPWRGRCETPV
RLQRLPETDGFCLILPPNLKSAIAAVTYMAEQLKKQDIDDSMTEDWQFIALVVDRLFLWL
FVIITTLGTLAMFLDASFNYTPDNPFP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttggactaccgcaagaagatgagtggaccaaataacataatgaacattcat
cggaaagccaaccaacttgttatcgtttacctttgcctctctttgaccggagcctcagaa
acggagcgaaggctccatgaggagatattcaagaactacaacttgaaggtacgaccagct
cagtactgggaggagaaagtgatggtgcgggtcggaatgactttgtcccagctcgtcagc
ttgaatgagaagaatggcgagatgacgaccaacgtgttcatgaatctggagtggaaagac
taccgcttgtcgtgggacccaaaggcgtacgacaacatcgacgttttgaggattcccgca
aacaaggtgtggcgccccgacatctacctcataaacaacaacgacggtcaatttgacgta
gctttatacgtcaacgtcttggtgtacaacgacgggacagtcaactggctcccgccggcc
atctaccgtacttcttgctccatcgaggttgcgtatttccccttcgactggcaaaactgc
agcatggttttccgctcgtatacctacgatgcctcggaagtcgatctgcagtattatctg
gacgataacggaaaggagatccgggagatagtcatagacgagaatgccttcacggagaac
ggcgagtggaacatatgccacaagccttcgagaaagaacgtcaaggaggatctgtacgag
gacatcaccttctacttgatcattgagaggaaacctcttttctatatcatcaacatcatt
gttccctgcattctcacgagcgttttggctatttttgtcttttaccttccacccggagca
ggagaaaagatgaccctttccatctcggttctcatcgccttgactgtcttcatgctgctg
ctggctgacagagtcccagagacttcactggccatcccaatcatcgtcaactacgtgatg
ttcaccatgatcttggtcacattctccgtcatcctgagtgtggtcgtcctcaacttgcac
caccgcacacccagcacgcacatcatgcccagctgggttcgcagtctcttcatcaacttc
ctgcccaagtacatcggcatgaccaggcccgagcaagacgagtgtcttttgaaggaggat
tcttgtgaccaaacacccccaccaagcttcaacggacgacagcccggaggggagtacttt
ttccgcaagatcaaccccgatcttgttataccttggagaggcaggtgcgagactccagtg
cggctccaaaggcttccagaaacagacggattctgtctgatccttccacccaacctgaag
tcggccatcgctgcggtcacatacatggctgagcagctgaagaagcaagatatcgacgat
tcgatgacagaagactggcagttcatcgccctggtggtggatcgtctcttcctgtggctt
tttgttatcatcaccactctgggcactttggcaatgttcttggacgccagtttcaactac
acacctgacaatccattcccataa
DBGET
integrated database retrieval system
