Syngnathus scovelli (Gulf pipefish): 125979882
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Entry
125979882 CDS
T08785
Symbol
lmnb1
Name
(RefSeq) lamin-B1 isoform X1
KO
K07611
lamin B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04210
Apoptosis
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125979882 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125979882 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125979882 (lmnb1)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
125979882 (lmnb1)
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
Motif
Other DBs
NCBI-GeneID:
125979882
NCBI-ProteinID:
XP_049594654
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Position
13:complement(864190..931087)
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AA seq
605 aa
AA seq
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MTSVTASPTGQRSTCIGDAPVSPTRITRLQEKQQLRNLNDRLAVYIETVRNVESEKDILN
LKICEKEGERSRELFGIKALYDNELANARRCLDDSSKERAWLEIELEKLQSEHEQLLHGN
HKKDFDVAEAHAQLKDLEAQLNAKNVILATSLSEKNILEATVADQQEQIIKLNSDLAQTK
KHLTDEMLVRVDLKNRHQSLKEEMEFRKTMHLEEVKEAQQRYETRLMEVDSGRKEEYESK
LSLALADMRLQNEEQMKIYKESMESTYIDKMDNMRRLSEMNGASASIAREELRESTVRIE
SLTAQLEGLRKETRSWRGRIAELEAVLAKEKDASRKLLAEKDRQVAEIQAKMLHQLNEYE
QLLDVKFALDMEINAYRKLLEGEEERLKLSSSPPSRVTMSRVSTSIRSVRTTQGKRKRVD
VEEQEASSSVSIAHAYSATGPIVIEEIDTDGKFISLLNAGDEDQAMVGCEMIKTIGSATA
IFKFTPKYSMKAGQKVTLWASDAGMSYKSPTDLIWKHQSCWSFGEDVHVVLINAQGEEVA
RRSITYKTAEEGDDGVEDLDADNGEEAMKDDLSQHNRTHTPHTLHTIITHTLVTHTRTTF
TNPNT
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgtaacggcatctccgactggccagaggagcacgtgtatcggtgatgcaccg
gtcagccccaccagaataacccgactgcaagaaaaacagcagctcaggaaccttaacgac
cgcctcgctgtttacatcgagacagtccgaaacgtagagtctgaaaaagacatactaaat
ctaaaaatttgtgagaaggaaggggaaagaagccgggagttatttggaataaaagctcta
tatgacaatgagcttgccaatgccagaaggtgcttggatgattcctctaaagaacgggcc
tggctggagattgagctggaaaaactccaatccgagcatgagcaacttttacatggcaac
cataaaaaagactttgatgtggcagaagcccacgcccagttaaaggatttagaagctcag
ctcaatgcaaaaaatgtcattcttgctacatccttgtctgaaaaaaacatcttggaggcc
accgtggctgaccaacaagaacagataattaagttgaattctgatcttgctcaaactaag
aagcaccttactgatgagatgcttgttcgtgtcgacttaaaaaaccgccatcagagtctg
aaagaggagatggagtttcgtaagaccatgcacctggaggaagtgaaggaagcacagcag
cggtatgagacacgtcttatggaggtggattctgggcgcaaagaggagtatgagtccaaa
ttgagtctggccttggcagacatgaggcttcagaatgaggagcagatgaaaatctacaaa
gaaagcatggagagcacttacatcgacaaaatggataatatgcgccgattgtctgaaatg
aatggagcgtcggccagcattgcccgagaggagctgagagagtcaaccgtaaggattgag
agcctcactgcccaactggaaggactacggaaagagactcgtagttggcgtggtcgcatt
gcagaactggaggcggtacttgctaaggaaaaagatgcaagccgcaaacttctggccgaa
aaagaccgccaagtggctgagatacaggcaaagatgctgcatcagttgaatgaatatgaa
cagttgcttgatgtaaaatttgctcttgacatggaaatcaatgcgtatcgcaaacttctg
gagggagaagaggaaagattgaagctgtcttccagccctccttctcgtgttactatgtct
cgagtatctaccagcatccggagtgttcggacgactcaggggaaaaggaaacgtgtcgat
gttgaggaacaggaagctagcagctcagtgtccattgctcatgcctattccgccacagga
cccattgttattgaggagattgatactgatggcaagttcatcagcctccttaacgctggt
gatgaggaccaggccatggtgggctgtgaaatgataaaaactattggaagtgcgacagcc
attttcaaattcacccctaaatatagcatgaaagctggacagaaagtcacgctttgggcc
tctgatgctggcatgagctataaatcccccactgatctgatttggaagcaccagtcttgt
tggagttttggggaggacgtccatgtggttttgatcaatgcacagggagaggaggtggca
aggagaagcattacttataagacagccgaagaaggggatgatggtgtggaagatctagat
gctgataatggagaggaggcgatgaaagacgacctctctcaacataaccgcacgcacaca
ccacacacccttcacacaataatcacacacacattagtcacacacacaaggaccacattc
acaaacccaaacacttga
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